HHsearch results for GI: 254780300 and protein with PDBid: 2cuk_A
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus HB8}
Probab=95.03 E-value=0.073 Score=30.78 Aligned_cols=86 Identities=20% Similarity=0.300 Sum_probs=58.4
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE-EEECCHHHHH
Q ss_conf 100010010355443301334466420134205532775322211212343300584560368622100-0113312333
Q gi|254780300|r 155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMI-LRMQQERIPR 233 (316)
Q Consensus 155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~-~~~~~e~~~~ 233 (316)
.+.|.++.++| .+++.+.....+..||+++....|..- +. . ....++++.+.++|+|.. ...-.+
T Consensus 141 ~l~gk~vgIiG---~G~IG~~~a~~l~~fg~~v~~~~~~~~-~~-----~-~~~~~l~ell~~sDiv~~~~plt~~---- 206 (311)
T 2cuk_A 141 DLQGLTLGLVG---MGRIGQAVAKRALAFGMRVVYHARTPK-PL-----P-YPFLSLEELLKEADVVSLHTPLTPE---- 206 (311)
T ss_dssp CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCC-SS-----S-SCBCCHHHHHHHCSEEEECCCCCTT----
T ss_pred CCCCCEEEEEE---ECHHHHHHHHHHHHCCCEEEEECCCCC-CC-----C-CCCCCHHHHHHHCCEEEECCCCCHH----
T ss_conf 24699899980---788999999999858998999889844-46-----8-7667999999769999993889847----
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf 4444555420235758899983799859955
Q gi|254780300|r 234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMH 264 (316)
Q Consensus 234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH 264 (316)
. ..-++.+.++.+|++++|.-
T Consensus 207 --------t--~~li~~~~l~~mk~~a~liN 227 (311)
T 2cuk_A 207 --------T--HRLLNRERLFAMKRGAILLN 227 (311)
T ss_dssp --------T--TTCBCHHHHTTSCTTCEEEE
T ss_pred --------H--CCCCCHHHHHHCCCCEEEEE
T ss_conf --------6--27748999974199849997