HHsearch results for GI: 254780300 and protein with PDBid: 2pi1_A
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.56 E-value=0.083 Score=30.41 Aligned_cols=99 Identities=17% Similarity=0.332 Sum_probs=65.6
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf 1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r 155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR 233 (316)
Q Consensus 155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~ 233 (316)
.+.|.++.++| .+++.......+..+|+.+....|..-. .....++ ...++++.++.+|+|+.. ..-.
T Consensus 138 ~l~g~~vgIiG---~G~IG~~~a~~l~~~g~~v~~~~~~~~~--~~~~~~~-~~~~l~ell~~sDiv~~~lPlt~----- 206 (334)
T 2pi1_A 138 ELNRLTLGVIG---TGRIGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGC-VYTSLDELLKESDVISLHVPYTK----- 206 (334)
T ss_dssp CGGGSEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTC-EECCHHHHHHHCSEEEECCCCCT-----
T ss_pred EECCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEECCCCCH--HHHHCCC-EECCHHHHHHHCCEEEECCCCCH-----
T ss_conf 10586899986---8989999999877458579998786511--2453382-54489999854897898478982-----
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCH
Q ss_conf 4444555420235758899983799859955899876874476
Q gi|254780300|r 234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISS 276 (316)
Q Consensus 234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~ 276 (316)
+. ..-++.+.++.+|++++|--.. ||.=|++
T Consensus 207 -------~T--~~li~~~~~~~mk~~a~lIN~a---RG~iVde 237 (334)
T 2pi1_A 207 -------ET--HHMINEERISLMKDGVYLINTA---RGKVVDT 237 (334)
T ss_dssp -------TT--TTCBCHHHHHHSCTTEEEEECS---CGGGBCH
T ss_pred -------HH--CCCCCHHHHHHCCCCCEEEECC---CCCEECH
T ss_conf -------54--0676999997369997898557---7750289