HHsearch results for GI: 254780300 and protein with PDBid: 3grf_A
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00 E-value=0 Score=621.39 Aligned_cols=299 Identities=23% Similarity=0.304 Sum_probs=273.5
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC-CC
Q ss_conf 77774178223899999999999999996442048775212897699996078733789999798761352111233-33
Q gi|254780300|r 4 FPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT-KN 82 (316)
Q Consensus 4 f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~-~~ 82 (316)
..+||||+++||+++|+..||++|.++|+.+.+. .+.|+||+++++|+|||||||+|||+|+.+|||+++++++ .+
T Consensus 5 ~~~khll~i~dls~~ei~~ll~~A~~~k~~~~~~---~~~l~~k~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~~ 81 (328)
T 3grf_A 5 KQTRHLLTISALCPKELAYLIDRALDMKKNPAKY---TARAANKTLLAFFAKPSLRTRVSLETAMTRLGGHAIYYELGAN 81 (328)
T ss_dssp CCSCCBSSGGGSCHHHHHHHHHHHHHHHHCGGGG---TTTTTTCEEEEEESSCCHHHHHHHHHHHHHHTCEEEEEEC---
T ss_pred CCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCC---CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf 8788715143199999999999999987374445---6556898899996578731699999999985994786673201
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-------C
Q ss_conf 210133342247999874136714652032100554200123421111234566312233222222201222-------1
Q gi|254780300|r 83 SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKG-------K 155 (316)
Q Consensus 83 s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g-------~ 155 (316)
|+++||||++||++++++| +|++++|++.++.+.++++++++| |||||++ ++||||+|+|++||+|++| .
T Consensus 82 s~~~kgEs~~Dt~~~ls~~-~d~ivvR~~~~~~~~~~a~~~~vp-VINa~~~-~~HPtQaL~Dl~Ti~e~~g~~~~~~~~ 158 (328)
T 3grf_A 82 SNVGGKETVQDTAEVFSRM-VDICTARLATKEMMREMAQHASVP-CINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNG 158 (328)
T ss_dssp -------CHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHCSSC-EEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTT
T ss_pred CCCCCCEEHHHHHHHHHCC-CCEEEEECCCHHHHHHHHHHCCCC-EECCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 2367862199999987334-653456525033566777507862-3547765-668269999999999984653334675
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC---------------CCCCCCCCCCCHHHCCCCCCE
Q ss_conf 00010010355443301334466420134205532775322211---------------212343300584560368622
Q gi|254780300|r 156 ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD---------------ISNMGVEVFHDMQKGLKNVDV 220 (316)
Q Consensus 156 l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~---------------~~~~~~~~~~d~~ea~~~aDv 220 (316)
+++++|+|+||. ++||++|++.+++++|+++++++|+++.+.. ..+.++++++|+++++++|||
T Consensus 159 ~~~l~i~~~gd~-~~~v~~S~~~~~~~~g~~v~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDv 237 (328)
T 3grf_A 159 FKGIKFAYCGDS-MNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp GGGCCEEEESCC-SSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred CCCCEEEECCCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCE
T ss_conf 136247632777-6542679999999779969996365335576699999999998763259839999679999617998
Q ss_pred EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 10001133123334444555420235758899983799859955899876874476797699701686877569999999
Q gi|254780300|r 221 IMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAI 300 (316)
Q Consensus 221 v~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~Al 300 (316)
||+++||+|++.++......+|+.+||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+||||
T Consensus 238 vy~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vrmAl 317 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAV 317 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHH
T ss_pred EEEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 98501120333055579999876424643999963699998989989998880188885798756999997209999999
Q ss_pred HHHHHCCCC
Q ss_conf 999977814
Q gi|254780300|r 301 IKELLENQN 309 (316)
Q Consensus 301 L~~~l~~~~ 309 (316)
|+++|++..
T Consensus 318 L~~lL~~~k 326 (328)
T 3grf_A 318 LDFFLHDCK 326 (328)
T ss_dssp HHHHHSCCC
T ss_pred HHHHHHHCC
T ss_conf 999984166