Query         gi|254780300|ref|YP_003064713.1| aspartate carbamoyltransferase catalytic subunit [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 316
No_of_seqs    112 out of 3842
Neff          6.7 
Searched_HMMs 23785
Date          Mon May 30 09:09:50 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780300.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1ml4_A Aspartate transcarbamoy 100.0       0       0  635.6  23.9  298    3-307     2-307 (308)
  2 3d6n_B Aspartate carbamoyltran 100.0       0       0  636.7  20.0  289    6-305     1-290 (291)
  3 3csu_A Protein (aspartate carb 100.0       0       0  629.6  22.3  298    2-310     2-309 (310)
  4 2at2_A Aspartate carbamoyltran 100.0       0       0  630.8  21.1  298    6-314     1-298 (300)
  5 1duv_G Octase-1, ornithine tra 100.0       0       0  622.8  25.8  301    2-307     1-333 (333)
  6 2rgw_A Aspartate carbamoyltran 100.0       0       0  624.7  23.6  295    6-309     1-304 (306)
  7 2w37_A Ornithine carbamoyltran 100.0       0       0  623.1  24.6  299    3-308    25-354 (359)
  8 3grf_A Ornithine carbamoyltran 100.0       0       0  621.4  24.4  299    4-309     5-326 (328)
  9 1pvv_A Otcase, ornithine carba 100.0       0       0  620.1  24.5  302    1-309     2-314 (315)
 10 1vlv_A Otcase, ornithine carba 100.0       0       0  617.3  24.5  299    1-305    13-324 (325)
 11 1dxh_A Ornithine carbamoyltran 100.0       0       0  613.1  25.7  302    2-307     2-334 (335)
 12 1oth_A Protein (ornithine tran 100.0       0       0  610.4  26.7  304    3-313     3-317 (321)
 13 3gd5_A Otcase, ornithine carba 100.0       0       0  613.3  22.2  297    3-310    10-317 (323)
 14 2i6u_A Otcase, ornithine carba 100.0       0       0  608.6  23.2  295    5-307     1-306 (307)
 15 1pg5_A Aspartate carbamoyltran 100.0       0       0  604.1  24.1  293    6-307     1-299 (299)
 16 1zq6_A Otcase, ornithine carba 100.0       0       0  596.6  23.0  296    3-308    20-357 (359)
 17 2ef0_A Ornithine carbamoyltran 100.0       0       0  595.6  22.0  292    5-306     8-301 (301)
 18 1js1_X Transcarbamylase; alpha 100.0       0       0  594.1  21.2  294    6-310     1-319 (324)
 19 3jtm_A Formate dehydrogenase,   97.1  0.0015 6.3E-08   41.7   7.0   92  155-263   161-253 (351)
 20 1gdh_A D-glycerate dehydrogena  96.4   0.005 2.1E-07   38.4   5.6   94  155-265   143-237 (320)
 21 1mx3_A CTBP1, C-terminal bindi  96.4  0.0066 2.8E-07   37.5   6.0   93  155-264   165-257 (347)
 22 2rir_A Dipicolinate synthase,   96.3   0.014 6.1E-07   35.3   7.3   96  150-266   149-246 (300)
 23 2nac_A NAD-dependent formate d  96.1   0.014 5.9E-07   35.4   6.7   93  155-264   188-281 (393)
 24 1wwk_A Phosphoglycerate dehydr  96.1   0.011 4.6E-07   36.1   6.0   92  155-265   139-231 (307)
 25 2g76_A 3-PGDH, D-3-phosphoglyc  96.0   0.021 8.7E-07   34.3   6.9  100  155-276   162-262 (335)
 26 2ekl_A D-3-phosphoglycerate de  96.0   0.012 4.9E-07   36.0   5.5   93  155-265   139-231 (313)
 27 3d4o_A Dipicolinate synthase s  95.9   0.012   5E-07   35.9   5.3   95  150-265   147-243 (293)
 28 2j6i_A Formate dehydrogenase;   95.9   0.016 6.8E-07   35.0   6.0   96  155-266   161-257 (364)
 29 2dbq_A Glyoxylate reductase; D  95.8   0.016 6.7E-07   35.1   5.7   91  155-264   147-238 (334)
 30 2o4c_A Erythronate-4-phosphate  95.7   0.016 6.8E-07   35.0   5.2  129  127-277    83-215 (380)
 31 3kbo_A Glyoxylate/hydroxypyruv  95.6   0.036 1.5E-06   32.8   6.8   92  154-264   135-227 (315)
 32 1qp8_A Formate dehydrogenase;   95.6   0.054 2.3E-06   31.6   7.7   87  155-264   121-208 (303)
 33 3oet_A Erythronate-4-phosphate  95.5    0.02 8.5E-07   34.4   5.2  128  125-277    84-218 (381)
 34 3evt_A Phosphoglycerate dehydr  95.4    0.04 1.7E-06   32.5   6.4   93  155-265   134-226 (324)
 35 1j4a_A D-LDH, D-lactate dehydr  95.3    0.04 1.7E-06   32.4   6.4   92  155-266   143-235 (333)
 36 2w2k_A D-mandelate dehydrogena  95.2   0.042 1.8E-06   32.3   6.1   95  155-265   160-255 (348)
 37 3d64_A Adenosylhomocysteinase;  95.1   0.067 2.8E-06   31.0   6.8  100  155-279   274-375 (494)
 38 2cuk_A Glycerate dehydrogenase  95.0   0.073 3.1E-06   30.8   6.9   86  155-264   141-227 (311)
 39 3p2o_A Bifunctional protein fo  94.9     0.2 8.5E-06   27.9   9.6  191    5-224     3-210 (285)
 40 3ce6_A Adenosylhomocysteinase;  94.9   0.077 3.2E-06   30.6   6.7  100  155-279   271-372 (494)
 41 1ygy_A PGDH, D-3-phosphoglycer  94.8   0.051 2.2E-06   31.8   5.6   93  155-266   139-232 (529)
 42 3ba1_A HPPR, hydroxyphenylpyru  94.7    0.14 5.8E-06   29.0   7.6   90  155-265   161-250 (333)
 43 1sc6_A PGDH, D-3-phosphoglycer  94.6    0.11 4.8E-06   29.5   7.1   99  155-276   142-240 (404)
 44 3hg7_A D-isomer specific 2-hyd  94.6   0.042 1.8E-06   32.3   4.8   63  155-222   137-199 (324)
 45 2pi1_A D-lactate dehydrogenase  94.6   0.083 3.5E-06   30.4   6.2   99  155-276   138-237 (334)
 46 1v8b_A Adenosylhomocysteinase;  94.5   0.087 3.7E-06   30.3   6.2   99  155-278   254-354 (479)
 47 3n58_A Adenosylhomocysteinase;  94.2    0.11 4.7E-06   29.6   6.2  100  155-279   244-345 (464)
 48 3l07_A Bifunctional protein fo  94.0    0.32 1.3E-05   26.6  10.4  191    5-224     3-211 (285)
 49 3c24_A Putative oxidoreductase  93.9   0.054 2.3E-06   31.6   4.2   36   42-79      7-42  (286)
 50 3gg9_A D-3-phosphoglycerate de  93.9    0.06 2.5E-06   31.3   4.3   91  155-263   157-248 (352)
 51 1dxy_A D-2-hydroxyisocaproate   93.8    0.32 1.3E-05   26.6   8.0  100  155-277   142-241 (333)
 52 3gvp_A Adenosylhomocysteinase   93.5    0.22 9.3E-06   27.6   6.7  103  154-281   216-320 (435)
 53 3gvx_A Glycerate dehydrogenase  93.4    0.23 9.6E-06   27.6   6.6   88  155-263   119-206 (290)
 54 3h9u_A Adenosylhomocysteinase;  92.7    0.15 6.5E-06   28.7   4.9  128  123-278   171-308 (436)
 55 1b0a_A Protein (fold bifunctio  92.6    0.54 2.3E-05   25.1   9.4  156   49-224    38-209 (288)
 56 2d0i_A Dehydrogenase; structur  92.5    0.27 1.1E-05   27.1   6.0   64  155-223   143-206 (333)
 57 2uyy_A N-PAC protein; long-cha  92.0   0.074 3.1E-06   30.7   2.5  119   69-194    50-194 (316)
 58 3k5p_A D-3-phosphoglycerate de  92.0    0.47   2E-05   25.5   6.7   89  156-265   154-243 (416)
 59 1xdw_A NAD+-dependent (R)-2-hy  90.2    0.95   4E-05   23.6   6.9   91  155-265   143-233 (331)
 60 1mv8_A GMD, GDP-mannose 6-dehy  90.1   0.079 3.3E-06   30.6   1.2   73  154-227   309-400 (436)
 61 2c2x_A Methylenetetrahydrofola  88.9     1.2 4.9E-05   23.0  10.2  176   51-267    39-233 (281)
 62 3gg2_A Sugar dehydrogenase, UD  88.3    0.44 1.9E-05   25.7   4.0   74  154-228   314-397 (450)
 63 2q3e_A UDP-glucose 6-dehydroge  88.3    0.38 1.6E-05   26.1   3.6   74  153-227   324-419 (467)
 64 2f1k_A Prephenate dehydrogenas  88.1     0.4 1.7E-05   26.0   3.7   20  176-195   151-170 (279)
 65 3dfz_A SIRC, precorrin-2 dehyd  87.3       1 4.2E-05   23.4   5.3   81  141-224    14-98  (223)
 66 3g79_A NDP-N-acetyl-D-galactos  86.8    0.83 3.5E-05   23.9   4.7   69  153-227   348-425 (478)
 67 3d1l_A Putative NADP oxidoredu  86.7    0.39 1.6E-05   26.1   3.0   20  173-192   149-168 (266)
 68 1u8x_X Maltose-6'-phosphate gl  85.7    0.43 1.8E-05   25.8   2.7  135   10-149    60-210 (472)
 69 1s6y_A 6-phospho-beta-glucosid  83.8     2.2 9.1E-05   21.2   5.8   70   90-165   131-202 (450)
 70 3l6d_A Putative oxidoreductase  83.7    0.32 1.4E-05   26.6   1.4   86  103-192    66-169 (306)
 71 3cky_A 2-hydroxymethyl glutara  83.6    0.52 2.2E-05   25.2   2.4   88   98-194    57-168 (301)
 72 2h78_A Hibadh, 3-hydroxyisobut  83.4    0.62 2.6E-05   24.8   2.7   95   93-194    51-167 (302)
 73 1vpd_A Tartronate semialdehyde  82.3    0.47   2E-05   25.5   1.8   96   93-194    53-169 (299)
 74 2dpo_A L-gulonate 3-dehydrogen  81.1     2.4  0.0001   20.9   5.0   18   12-29     34-51  (319)
 75 2o3j_A UDP-glucose 6-dehydroge  81.1     1.1 4.6E-05   23.2   3.3   74  153-227   330-423 (481)
 76 3d0o_A L-LDH 1, L-lactate dehy  80.9     1.9 7.8E-05   21.7   4.4   11   63-73     22-32  (317)
 77 1f0y_A HCDH, L-3-hydroxyacyl-C  80.1     2.2 9.3E-05   21.2   4.6   17   12-28     43-59  (302)
 78 3dcm_X AdoMet, uncharacterized  79.4     1.9 8.2E-05   21.5   4.1   48  173-220    31-100 (192)
 79 3dfu_A Uncharacterized protein  79.3       2 8.3E-05   21.5   4.1   17  178-194   119-135 (232)
 80 2ahr_A Putative pyrroline carb  79.3    0.94   4E-05   23.6   2.5   16  103-119    61-76  (259)
 81 2gf2_A Hibadh, 3-hydroxyisobut  78.9    0.65 2.7E-05   24.6   1.5   98   91-194    46-164 (296)
 82 1yb4_A Tartronic semialdehyde   78.3     1.8 7.5E-05   21.8   3.6   84  103-195    59-167 (295)
 83 1np3_A Ketol-acid reductoisome  78.2     1.7   7E-05   22.0   3.5   71   42-117    12-87  (338)
 84 3dzb_A Prephenate dehydrogenas  77.4     1.3 5.5E-05   22.7   2.7   92  103-195    66-183 (317)
 85 2gcg_A Glyoxylate reductase/hy  77.2     3.6 0.00015   19.8   6.3   92  156-264   153-244 (330)
 86 1ldn_A L-lactate dehydrogenase  76.7     2.3 9.5E-05   21.1   3.8   10  138-147    87-96  (316)
 87 1a4i_A Methylenetetrahydrofola  75.9     3.9 0.00016   19.6  11.2  191    8-224     5-215 (301)
 88 1evy_A Glycerol-3-phosphate de  75.5     2.8 0.00012   20.5   4.0   15   52-66     90-104 (366)
 89 3mog_A Probable 3-hydroxybutyr  73.8     4.4 0.00018   19.3   5.5   21   11-31     32-52  (483)
 90 3c7a_A Octopine dehydrogenase;  73.8     1.8 7.5E-05   21.8   2.6   21   92-114    74-94  (404)
 91 1obb_A Maltase, alpha-glucosid  72.9     3.9 0.00017   19.6   4.2  137   10-149    35-189 (480)
 92 3k96_A Glycerol-3-phosphate de  72.3     4.1 0.00017   19.4   4.2  111   66-194    66-183 (356)
 93 1vjt_A Alpha-glucosidase; TM07  72.3     2.2   9E-05   21.3   2.8  135   10-147    46-206 (483)
 94 1dlj_A UDP-glucose dehydrogena  71.7       3 0.00013   20.3   3.4   58  166-226   325-382 (402)
 95 3doj_A AT3G25530, dehydrogenas  71.0     2.2 9.4E-05   21.1   2.6   98   92-195    68-186 (310)
 96 2hk9_A Shikimate dehydrogenase  70.3     5.2 0.00022   18.7   7.8  170   51-227    16-197 (275)
 97 1i36_A Conserved hypothetical   69.0     1.7 7.1E-05   21.9   1.6   15  103-117    57-71  (264)
 98 3g0o_A 3-hydroxyisobutyrate de  67.9     2.7 0.00011   20.6   2.5   39  103-144    65-111 (303)
 99 3oj0_A Glutr, glutamyl-tRNA re  66.4     1.7   7E-05   22.0   1.2   68  155-225    18-88  (144)
100 1pjq_A CYSG, siroheme synthase  65.3     4.9 0.00021   18.9   3.4   88   95-191   236-328 (457)
101 3nep_X Malate dehydrogenase; h  65.1     6.3 0.00027   18.2   3.9   20  286-305   289-308 (314)
102 3k6j_A Protein F01G10.3, confi  64.3     6.8 0.00029   18.0   4.9   10  158-167   223-232 (460)
103 2hmt_A YUAA protein; RCK, KTN,  63.5     2.6 0.00011   20.7   1.7   67  154-223     2-76  (144)
104 1bg6_A N-(1-D-carboxylethyl)-L  63.1     3.6 0.00015   19.8   2.4   46   67-114    42-87  (359)
105 1smk_A Malate dehydrogenase, g  62.6       3 0.00012   20.4   1.9   25  137-161   125-150 (326)
106 1mld_A Malate dehydrogenase; o  61.4     7.6 0.00032   17.7   3.8   25  137-161   117-142 (314)
107 3e18_A Oxidoreductase; dehydro  61.0     4.6 0.00019   19.1   2.6   46   48-95     67-112 (359)
108 7mdh_A Protein (malate dehydro  60.7       8 0.00033   17.6   4.9   27  287-313   338-364 (375)
109 2pv7_A T-protein [includes: ch  60.3     7.7 0.00032   17.7   3.7  126   58-195    31-169 (298)
110 1yrl_A Ketol-acid reductoisome  60.2     3.3 0.00014   20.0   1.8   77   34-115    25-111 (491)
111 3c1a_A Putative oxidoreductase  59.9     6.5 0.00027   18.1   3.2   16   60-75     81-96  (315)
112 2z04_A Phosphoribosylaminoimid  59.2     4.8  0.0002   19.0   2.4   17   65-81     17-33  (365)
113 2i76_A Hypothetical protein; N  58.8     2.2 9.4E-05   21.2   0.7   21  173-193   135-155 (276)
114 3e9m_A Oxidoreductase, GFO/IDH  58.6     8.1 0.00034   17.5   3.5   24  287-310   302-325 (330)
115 3l49_A ABC sugar (ribose) tran  58.0     8.8 0.00037   17.3   5.0   83   44-131     3-92  (291)
116 1ecf_A Glutamine phosphoribosy  57.5       9 0.00038   17.2   5.3   90  106-198   297-403 (504)
117 1a5z_A L-lactate dehydrogenase  56.4     8.4 0.00036   17.4   3.3   13  298-310   301-313 (319)
118 2v6b_A L-LDH, L-lactate dehydr  55.9     7.9 0.00033   17.6   3.1   19   91-109    96-114 (304)
119 3fef_A Putative glucosidase LP  55.8     7.2  0.0003   17.8   2.9   58   90-148   125-184 (450)
120 1ur5_A Malate dehydrogenase; o  55.6     9.7 0.00041   17.0   4.2   22  123-147    71-92  (309)
121 1meo_A Phosophoribosylglycinam  54.4      10 0.00042   16.9   4.7   37   93-130    70-106 (209)
122 2pju_A Propionate catabolism o  54.0     4.6 0.00019   19.1   1.7   80   98-193    59-138 (225)
123 1x13_A NAD(P) transhydrogenase  53.3      11 0.00044   16.8   4.3   95  154-263   168-289 (401)
124 1gpj_A Glutamyl-tRNA reductase  52.9      11 0.00045   16.7   4.5   75  149-226   158-236 (404)
125 2gci_A Probable alpha-methylac  51.8      11 0.00047   16.6   4.5   30  140-169   130-159 (360)
126 2b0j_A 5,10-methenyltetrahydro  50.3     5.6 0.00024   18.5   1.6   24  201-224   125-148 (358)
127 1x7d_A Ornithine cyclodeaminas  48.5      12  0.0005   16.4   3.1   65  157-224   128-201 (350)
128 1edz_A 5,10-methylenetetrahydr  47.8      13 0.00054   16.2   9.4  169   48-224    40-252 (320)
129 1fmt_A Methionyl-tRNA FMet for  47.7      13 0.00054   16.2   6.8   74   48-130    28-108 (314)
130 2i99_A MU-crystallin homolog;   47.2      13 0.00055   16.2   6.0  102  158-282   135-243 (312)
131 2hjr_A Malate dehydrogenase; m  45.9      14 0.00057   16.0   3.9   26  121-149    81-106 (328)
132 1pjc_A Protein (L-alanine dehy  44.4      11 0.00046   16.6   2.4   95  154-263   163-264 (361)
133 3fr7_A Putative ketol-acid red  43.5     9.6  0.0004   17.0   1.9   14   42-55     49-63  (525)
134 1q7e_A Hypothetical protein YF  43.4      15 0.00063   15.8   3.0   11  140-150   145-155 (428)
135 3kcq_A Phosphoribosylglycinami  43.3      15 0.00063   15.8   3.8   15  178-192   130-144 (215)
136 3euw_A MYO-inositol dehydrogen  43.2      15 0.00063   15.8   3.4   17  287-303   307-323 (344)
137 2q5c_A NTRC family transcripti  43.2     9.5  0.0004   17.1   1.9   83   95-194    45-127 (196)
138 3hhp_A Malate dehydrogenase; M  43.0      15 0.00064   15.8   3.7   25  137-161   118-143 (312)
139 3o1l_A Formyltetrahydrofolate   42.4      15 0.00065   15.7   3.0  141  132-311   112-293 (302)
140 3lou_A Formyltetrahydrofolate   41.9      16 0.00066   15.7   3.4  144  132-313   102-285 (292)
141 1b8p_A Protein (malate dehydro  41.0      16 0.00068   15.6   5.0   42  138-184   134-175 (329)
142 2zqz_A L-LDH, L-lactate dehydr  40.9      16 0.00068   15.6   3.9   26  138-166   126-151 (326)
143 3obi_A Formyltetrahydrofolate   40.8      16 0.00069   15.5   3.4  141  132-309    96-276 (288)
144 2vhw_A Alanine dehydrogenase;   40.4      12  0.0005   16.4   2.0   95  154-263   164-265 (377)
145 1x0v_A GPD-C, GPDH-C, glycerol  39.8      17 0.00071   15.4   3.8   87   92-193    82-175 (354)
146 1up7_A 6-phospho-beta-glucosid  39.7      17 0.00071   15.4   4.4  134   10-149    34-180 (417)
147 1hr8_O COX4, cytochrome C oxid  37.4       6 0.00025   18.4   0.1   13   52-64      8-20  (26)
148 3e8x_A Putative NAD-dependent   36.7      19 0.00079   15.1   3.3   12  184-195   162-173 (236)
149 3l4e_A Uncharacterized peptida  36.5      17 0.00073   15.4   2.4   17   63-79     48-64  (206)
150 2ldx_A APO-lactate dehydrogena  34.6      15 0.00062   15.8   1.7   79   59-149    31-111 (331)
151 3ktd_A Prephenate dehydrogenas  34.6      18 0.00077   15.2   2.2  131   62-195    21-190 (341)
152 3kux_A Putative oxidoreductase  34.1      21 0.00087   14.9   3.6   15   61-75     80-94  (352)
153 2g04_A Probable fatty-acid-COA  33.7      21 0.00088   14.8   5.9   32  138-169   130-161 (359)
154 1zcj_A Peroxisomal bifunctiona  32.6      22 0.00092   14.7   7.3   26   96-121   134-160 (463)
155 3on5_A BH1974 protein; structu  32.6      22 0.00092   14.7   2.4   35  158-195   199-233 (362)
156 3ic5_A Putative saccharopine d  32.3      15 0.00065   15.7   1.5   64  158-224     5-76  (118)
157 1lu9_A Methylene tetrahydromet  32.0      21 0.00089   14.8   2.2  105  118-224    77-195 (287)
158 3db2_A Putative NADPH-dependen  31.9      22 0.00094   14.7   2.3   25   52-76     70-94  (354)
159 1yj8_A Glycerol-3-phosphate de  31.2      23 0.00097   14.6   3.5   13  103-115   104-116 (375)
160 2bw0_A 10-FTHFDH, 10-formyltet  30.5      24   0.001   14.5   3.5   77   48-130    47-126 (329)
161 3p7m_A Malate dehydrogenase; p  29.7      24   0.001   14.4   4.1   10  138-147    86-95  (321)
162 1qo0_D AMIR; binding protein,   29.1      24 0.00099   14.5   2.0   12   64-75     28-39  (196)
163 1leh_A Leucine dehydrogenase;   29.0      25  0.0011   14.3   2.6   38  154-194   169-206 (364)
164 3hn7_A UDP-N-acetylmuramate-L-  27.5      27  0.0011   14.2   2.8   10  101-110   215-224 (524)
165 2eq5_A 228AA long hypothetical  27.4      25  0.0011   14.3   1.9   41   91-132    64-104 (228)
166 3moi_A Probable dehydrogenase;  27.2      18 0.00077   15.2   1.2   53   44-96     60-112 (387)
167 3k92_A NAD-GDH, NAD-specific g  27.0      27  0.0011   14.1   2.1   47  142-191   201-251 (424)
168 2vjq_A Formyl-coenzyme A trans  26.5      28  0.0012   14.0   3.2   12   95-107    83-94  (428)
169 2yyy_A Glyceraldehyde-3-phosph  26.2      28  0.0012   14.0   2.2   11  102-112    81-91  (343)
170 3k5i_A Phosphoribosyl-aminoimi  25.8      29  0.0012   14.0   5.7   44   64-108    39-92  (403)
171 5mdh_A Malate dehydrogenase; o  25.5      29  0.0012   13.9   4.6   22  138-161   130-151 (333)
172 6ldh_A M4 APO-lactate dehydrog  24.6      30  0.0013   13.8   4.1   22   59-80     33-54  (330)
173 3nva_A CTP synthase; rossman f  24.1      31  0.0013   13.8   6.8  100   90-189   192-329 (535)
174 3e82_A Putative oxidoreductase  24.1      31  0.0013   13.8   2.6   21   56-76     75-95  (364)
175 2qv7_A Diacylglycerol kinase D  24.0      27  0.0011   14.1   1.6   88   42-136    20-119 (337)
176 2eez_A Alanine dehydrogenase;   23.8      20 0.00083   15.0   0.9   95  154-263   162-263 (369)
177 2wtb_A MFP2, fatty acid multif  23.4      32  0.0013   13.7   6.4  139  138-280   281-474 (725)
178 1c1d_A L-phenylalanine dehydro  23.1      32  0.0014   13.6  11.6  175   19-226    52-240 (355)
179 1txg_A Glycerol-3-phosphate de  22.7      33  0.0014   13.6   3.5   12  103-114    72-83  (335)
180 1jkx_A GART;, phosphoribosylgl  22.2      33  0.0014   13.5   3.8   13   97-109    74-86  (212)
181 1omo_A Alanine dehydrogenase;   21.9      34  0.0014   13.5   5.3  103  158-282   125-234 (322)
182 1oao_A CODH, carbon monoxide d  21.8      34  0.0014   13.5   3.9   65  124-192   540-606 (674)
183 1ff9_A Saccharopine reductase;  21.3      35  0.0015   13.4   3.1   27  117-145   109-135 (450)
184 3ive_A Nucleotidase; structura  21.0      35  0.0015   13.4   2.8   73   85-165    71-147 (509)
185 1vb3_A Threonine synthase; PLP  20.7      36  0.0015   13.3   1.7   56    6-72     59-115 (428)
186 3llv_A Exopolyphosphatase-rela  20.6      35  0.0015   13.4   1.6   22  170-191    15-36  (141)
187 2g1u_A Hypothetical protein TM  20.4      36  0.0015   13.3   3.3   65  157-224    18-91  (155)
188 3ec7_A Putative dehydrogenase;  20.4      36  0.0015   13.3   2.9   18  287-304   322-339 (357)
189 3exa_A TRNA delta(2)-isopenten  20.2      37  0.0015   13.3   4.4   96   45-147     2-112 (322)

No 1  
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=100.00  E-value=0  Score=635.63  Aligned_cols=298  Identities=33%  Similarity=0.461  Sum_probs=275.9

Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC-CCC
Q ss_conf             7777741782238999999999999999964420487752128976999960787337899997987613521112-333
Q gi|254780300|r    3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVINI-NTK   81 (316)
Q Consensus         3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l-~~~   81 (316)
                      +|.+||||+++||+++|+..||++|.++|+.+.++. ..++|+||+++++|+|||||||+|||+|+.+|||+++++ +++
T Consensus         2 ~~~~r~~L~i~dls~~ei~~ll~~A~~lk~~~~~~~-~~~~l~gk~v~llF~~pStRTR~SFe~A~~~LGg~~i~~~~~~   80 (308)
T 1ml4_A            2 DWKGRDVISIRDFSKEDIETVLATAERLERELKEKG-QLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEAS   80 (308)
T ss_dssp             CCTTCCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHS-SCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEESCGG
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             899988565001899999999999999998776068-8776799889998348975378999999997599278667853


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf             32101333422479998741367146520321005542001234211112345663122332222222012221000100
Q gi|254780300|r   82 NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHI  161 (316)
Q Consensus        82 ~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~i  161 (316)
                      .+++++|||++||++|+|+| +|+|++|++.++.+.++++++++| |||||+|..+||||+|+|++||+|++|+++|+||
T Consensus        81 ~~~~~~~Es~~Dta~vls~~-~D~iviR~~~~~~~~~~a~~~~vP-VINAg~~~~~HPtQ~L~Dl~Ti~e~~g~l~glki  158 (308)
T 1ml4_A           81 TSSVKKGESLRDTIKTVEQY-CDVIVIRHPKEGAARLAAEVAEVP-VINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKI  158 (308)
T ss_dssp             GSGGGGTCCHHHHHHHHTTT-CSEEEEEESSTTHHHHHHHTCSSC-EEEEEETTSCCHHHHHHHHHHHHHHSSCSSSEEE
T ss_pred             CCCCCCCCCHHHHHHHHHCC-CCEEEEEECHHHHHHHHHHCCCCC-EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             12157875099999875314-855999723000589987558976-7757779876807899868617563388357779


Q ss_pred             EECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10355443301334466420134205532775322211-------21234330058456036862210001133123334
Q gi|254780300|r  162 AICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       162 a~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      +|+||+.|+||+||++.+++.+|+++++++|+++.+..       ..+..+.+++|++++++++|+||+++||.|++...
T Consensus       159 ~~vGd~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~~~~~~~  238 (308)
T 1ml4_A          159 GLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDE  238 (308)
T ss_dssp             EEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSH
T ss_pred             EEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHCCCCEEECCCHHHHHCCCCEEECCEECCCCCCHH
T ss_conf             86458764412888999998769839997964754878899999971983021289899630575220220023445258


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4445554202357588999837998599558998768744767976997016868775699999999999778
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLEN  307 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~  307 (316)
                        .++.+++.+||||.++|++|+++++||||||  ||+||+++|+|+|+|+||+||+||+|+|||||+|+||-
T Consensus       239 --~~~~~~~~~~~v~~~~l~~a~~~~i~mHcLP--Rg~Ei~~~v~d~~~s~v~~QaeNrl~v~~AlL~~llG~  307 (308)
T 1ml4_A          239 --QEYLKVKGSYQVNLKVLEKAKDELRIMHPLP--RVDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLGV  307 (308)
T ss_dssp             --HHHHTTTTCCCBCTTGGGGSCTTCEEECCSC--CSSSBCGGGGGSTTBCHHHHHHTHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHCCCCCCHHHHHHCCCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             --9999985066579999971699989969999--97612486657874579999972199999999998676


No 2  
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=100.00  E-value=0  Score=636.66  Aligned_cols=289  Identities=37%  Similarity=0.596  Sum_probs=271.8

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             77417822389999999999999999644204877521289769999607873378999979876135211123333210
Q gi|254780300|r    6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAM   85 (316)
Q Consensus         6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~   85 (316)
                      |||||+++||+++|++.||++|.++|+.+.       ...+|+++++|+|||||||+|||+|+++|||++++++++++|+
T Consensus         1 Mr~~l~~~dls~~ei~~ll~~A~~lk~~~~-------~~~~k~~~llF~kpSTRTR~SFe~A~~~LGg~~i~l~~~~~~~   73 (291)
T 3d6n_B            1 MRSLISSLDLTREEVEEILKYAKEFKEGKE-------ETIKASAVLFFSEPSTRTRLSFEKAARELGIETYLVSGSESST   73 (291)
T ss_dssp             CCCBCCGGGCCHHHHHHHHHHHHHHHTTCC-------CCCCCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEETTTTSC
T ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHCCH-------HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf             987277022999999999999999972620-------0368738999808974389999999998699889677111126


Q ss_pred             CCCCCCCCHHHHHHHHCCCCEEEECCC-CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf             133342247999874136714652032-1005542001234211112345663122332222222012221000100103
Q gi|254780300|r   86 KKGENIADTIATLNALRPNIIVIRHPY-SGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC  164 (316)
Q Consensus        86 ~kgEs~~Dta~vls~~~~d~iv~R~~~-~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v  164 (316)
                      +||||++||++|+++|++|++|+|++. +..+.++++++++| |||||+|.++||||+|+|++||+|++|.++|++|+|+
T Consensus        74 ~kgEs~~Dt~~vls~~~~d~iv~R~~~~~~~~~~~a~~~~vp-VINag~~~~~HPtQaLaDl~Ti~e~~g~l~~l~i~~v  152 (291)
T 3d6n_B           74 VKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLR-LVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYV  152 (291)
T ss_dssp             CTTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSE-EEEEEETTTBCHHHHHHHHHHHHHHHSCCTTCEEEEE
T ss_pred             CCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             678748899997532464389982454420089997327977-8988889776837899879899998398778659999


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf             55443301334466420134205532775322211212343300584560368622100011331233344445554202
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKH  244 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~  244 (316)
                      ||+.|+||+||++.+++++|+++++++|+++.|+.....++++++|++++++++|||||++||+|+..++.....++|+.
T Consensus       153 GD~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~p~~~~~~~i~~~~d~~~ai~~aDvv~~~~~~~~~~~~~~~~~~~~~~~  232 (291)
T 3d6n_B          153 GDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSESSYFK  232 (291)
T ss_dssp             SCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEECCCCTHHHHTTSSSCHHHHHH
T ss_pred             ECCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCCHHHCCEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             46876689999999998569989998952437465302774897799999854899998244462010556677766788


Q ss_pred             CCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3575889998379985995589987687447679769970168687756999999999997
Q gi|254780300|r  245 VYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL  305 (316)
Q Consensus       245 ~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l  305 (316)
                      +||||.++|+.   +++||||||++||+||+++|+|+|+|+||+||+||+|+|||||+|++
T Consensus       233 ~~~v~~~~~~~---~~i~mHcLPa~Rg~Ei~~~V~~~~~s~v~~QaeNrl~~~~AlL~~L~  290 (291)
T 3d6n_B          233 QFGLTKERFEK---VKLYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAIYKFLW  290 (291)
T ss_dssp             HHSBCHHHHTT---CCCEECSSCCCBTTTBCGGGSSSTTBCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHCCC---CCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH
T ss_conf             88888986578---99894899999888679768369855799999711999999999986


No 3  
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli K12} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=100.00  E-value=0  Score=629.61  Aligned_cols=298  Identities=30%  Similarity=0.444  Sum_probs=268.2

Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf             9777774178223899999999999999996442048775212897699996078733789999798761352111233-
Q gi|254780300|r    2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT-   80 (316)
Q Consensus         2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~-   80 (316)
                      ++|.|||||+++||+++|+..||++|.++|+.+     ..+.|+||+++++|+|||||||+|||+||.+|||++++++. 
T Consensus         2 n~l~~rh~l~i~dls~~ei~~ll~~A~~lK~~~-----~~~~L~gk~iallF~kpSTRTR~SFe~A~~~LGg~~~~~~~~   76 (310)
T 3csu_A            2 NPLYQKHIISINDLSRDDLNLVLATAAKLKANP-----QPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDS   76 (310)
T ss_dssp             CTTTTCCBCCGGGCCHHHHHHHHHHHHHHHHSC-----CTTTTTTCEEEEEESSCCHHHHHHHHHHHHTTTCEEEEESCC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             988788858700099999999999999987589-----875578998999862787443999999999919960225766


Q ss_pred             -CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             -3321013334224799987413671465203210055420012342111123456631223322222220122210001
Q gi|254780300|r   81 -KNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNL  159 (316)
Q Consensus        81 -~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l  159 (316)
                       ..++.+||||++||++|+|+| .|+|++|++.++....++++++.+||||||+|..+||||+|+|++||+|++|+++|+
T Consensus        77 ~~~~~~~kgEs~~Dta~vls~~-~d~iv~R~~~~~~~~~~~~~~~~vPVINag~~~~~HPtQ~LaDl~Ti~e~~g~l~g~  155 (310)
T 3csu_A           77 ANTSLGKKGETLADTISVISTY-VDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNL  155 (310)
T ss_dssp             -----CCSHHHHHHHHHHHTTT-CSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHSCSSSC
T ss_pred             CCCCCCCCCCCHHHHHHHHHCC-CCEEEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf             4322366875199987665404-760699842201458999837788767677887647188998788787642776898


Q ss_pred             CEEECCCCCCCCHHHHHHHHHHCCC-CEEEECCCCCCCCCC-------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             0010355443301334466420134-205532775322211-------21234330058456036862210001133123
Q gi|254780300|r  160 HIAICGDILHSRVARSDIMLLNTMG-ARIRVIAPITLLPKD-------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       160 ~ia~vGD~~~~~v~~S~~~~~~~~g-~~v~~~~P~~~~~~~-------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      +|+|+||+.||||++|++.+++++| +++++++|+++.|..       ..+..+++++|+++++++||+||+++||.|+.
T Consensus       156 kv~~vGd~~~~~v~~S~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~~aDvvy~~~~~~e~~  235 (310)
T 3csu_A          156 HVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERL  235 (310)
T ss_dssp             EEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC------
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEHHHCCC
T ss_conf             79998468777147899999996163738984884137838999999861886533306776424787564200000234


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             3344445554202357588999837998599558998768744767976997016868775699999999999778142
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNK  310 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~  310 (316)
                      ...   ...++...||||+++|+.++++++||||||  ||+||+++|+|+|+|+||+|||||+|+|||||+++|+.+-.
T Consensus       236 ~~~---~~~~~~~~~~v~~~~l~~a~~~~i~mHcLP--Rg~EV~~~V~d~p~S~v~~QaeNrl~~qkAlL~~ll~~~~~  309 (310)
T 3csu_A          236 DPS---EYANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLV  309 (310)
T ss_dssp             --------------CCBCGGGGTTCCTTCEEECCSC--CSSSBCHHHHTSTTBCHHHHHHTHHHHHHHHHHHHHSSCCC
T ss_pred             CCH---HHHHHHHHHHHHHHHHHCCCCCCEEEECCC--CCCEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             521---367788888867999963798939940899--96852287655886529999971399999999999785763


No 4  
>2at2_A Aspartate carbamoyltransferase; 3.00A {Bacillus subtilis} SCOP: c.78.1.1 c.78.1.1
Probab=100.00  E-value=0  Score=630.81  Aligned_cols=298  Identities=36%  Similarity=0.560  Sum_probs=278.2

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             77417822389999999999999999644204877521289769999607873378999979876135211123333210
Q gi|254780300|r    6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAM   85 (316)
Q Consensus         6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~   85 (316)
                      |||||+++||+++|++.||++|.++|+++.     .+.|+||+++++|+|||||||+|||+|+.+|||+++++++.++++
T Consensus         1 Mkh~lsi~dls~~ei~~ll~~A~~lK~~~~-----~~~L~gK~v~llF~~pSTRTR~SFe~A~~~LGg~~i~l~~~~~~~   75 (300)
T 2at2_A            1 MKHLTTMSELSTEEIKDLLQTAQELKSGKT-----DNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSV   75 (300)
T ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHCCCC-----CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf             988386011899999999999999875898-----776899858998717970489999999998198599960001136


Q ss_pred             CCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECC
Q ss_conf             13334224799987413671465203210055420012342111123456631223322222220122210001001035
Q gi|254780300|r   86 KKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICG  165 (316)
Q Consensus        86 ~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vG  165 (316)
                      ++||+++||++++++|++|++++|++.++.+.++++++++| |||||+|..+||||+|+|++||+|.+|+++|++|+|+|
T Consensus        76 ~~gEs~~dt~~~l~~~~~d~iv~r~~~~~~~~~~a~~s~vP-VINAg~~~~~HPtQaLaD~~Ti~e~~g~~~gl~ia~vG  154 (300)
T 2at2_A           76 QKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIP-ILNAGDGCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHG  154 (300)
T ss_pred             CCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf             68876899999633101503678523201688864036874-22078887668579998899999987602798220257


Q ss_pred             CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf             54433013344664201342055327753222112123433005845603686221000113312333444455542023
Q gi|254780300|r  166 DILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHV  245 (316)
Q Consensus       166 D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~  245 (316)
                      |+.|+||++|++.++..+|+++.+++|+++.+...   ...++.+++++++++|++|+++|+.|++.+.  ...+++..+
T Consensus       155 D~~~~~v~~s~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~a~~~aDvv~~~~~~~~~~~~~--~~~~~~~~~  229 (300)
T 2at2_A          155 DIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEEN---TFGTYVSMDEAVESSDVVMLLRIQNERHQSA--VSQEGYLNK  229 (300)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEECHHHHCCCHH---HCCEEECHHHHHHHCCEEEEEEECCCCCCCH--HHHHHHHHH
T ss_conf             86421568999999883598289958036285422---1343633878542068677632112112211--246888762


Q ss_pred             CCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             575889998379985995589987687447679769970168687756999999999997781422201
Q gi|254780300|r  246 YSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNKITQK  314 (316)
Q Consensus       246 ~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~~~~~  314 (316)
                      ||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||||+|+|+++.+..++
T Consensus       230 ~~v~~~~l~~a~~~ai~mHcLP~~rg~EV~~~V~d~p~s~v~~QAeNrl~~~~AlL~~~L~~~~~~~~~  298 (300)
T 2at2_A          230 YGLTVERAERMKRHAIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQCALQTNVKRGEA  298 (300)
T ss_pred             HCCHHHHHHHCCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHCCCC
T ss_conf             003299997279998997998888996318867269855499999662999999999998521121244


No 5  
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=100.00  E-value=0  Score=622.84  Aligned_cols=301  Identities=21%  Similarity=0.267  Sum_probs=276.8

Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             97777741782238999999999999999964420487752128976999960787337899997987613521112333
Q gi|254780300|r    2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTK   81 (316)
Q Consensus         2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~   81 (316)
                      .+|.|||||+++||+++||+.||++|.++|..+... ...++|+||+++++|+|||||||+|||+|+++|||++++++++
T Consensus         1 ~~~~~khlL~i~dls~~ei~~ll~~A~~lk~~~~~~-~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~   79 (333)
T 1duv_G            1 SGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSG-KEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPS   79 (333)
T ss_dssp             CCCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHTT-CCCCSCTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCC
T ss_conf             989987816600189999999999999998556458-8665579998999965897235999999999779818755810


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCC
Q ss_conf             32101333422479998741367146520321005542001234211112345663122332222222012221--0001
Q gi|254780300|r   82 NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGK--ISNL  159 (316)
Q Consensus        82 ~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~--l~~l  159 (316)
                      +|+++||||++||++|+++| +|+||+|++.++.+.++++++++| |||||++ ++||||+|+|++||+|++|.  .+++
T Consensus        80 ~ss~~kgEsl~Dt~~~ls~y-~D~iv~R~~~~~~~~~~a~~~~vP-VIN~~~~-~~HPtQaL~Dl~Ti~e~~~~~~~~~~  156 (333)
T 1duv_G           80 GSQIGHKESIKDTARVLGRM-YDGIQYRGYGQEIVETLAEYASVP-VWNGLTN-EFHPTQLLADLLTMQEHLPGKAFNEM  156 (333)
T ss_dssp             SSCBTTTBCHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHSSC-EEESCCS-SCCHHHHHHHHHHHHHHSTTCCGGGC
T ss_pred             CCCCCCCCCHHHHHHHHHCC-CCEEEEECCCHHHHHHHHHHCCCC-EEECCCC-CCCHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             01135663057799886504-867998354366799999757888-8979999-87747999989999999732445550


Q ss_pred             CEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEECC
Q ss_conf             0010355443301334466420134205532775322211-----------21234330058456036862210001133
Q gi|254780300|r  160 HIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQQ  228 (316)
Q Consensus       160 ~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~  228 (316)
                      +++|+||. ++||++|++.+++++|+++++++|+++.|..           ..+..+++++|+++++++|||||+++||+
T Consensus       157 ~i~~~~~~-~~~v~~s~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvyt~~~~~  235 (333)
T 1duv_G          157 TLVYAGDA-RNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVS  235 (333)
T ss_dssp             EEEEESCT-TSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSC
T ss_pred             EEEECCCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCEEEEEEEEE
T ss_conf             58861765-43201258888876397179963765587678999999998762986798638999961698300346785


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHH-CCCCCEEECCCC------------------CCCCCCCCHHHHCCCCCHHHHH
Q ss_conf             123334444555420235758899983-799859955899------------------8768744767976997016868
Q gi|254780300|r  229 ERIPRSLIPSIREYKHVYSLDEKKLKY-AKKDALVMHPGP------------------INRNYEISSSVADGSQSIIQYQ  289 (316)
Q Consensus       229 e~~~~~~~~~~~~~~~~~~v~~~~l~~-a~~~ai~mHcLP------------------~~Rg~Ev~~~v~d~~~s~v~~Q  289 (316)
                      |+.......+..+++.+||||.++|+. ++++++||||||                  +|||+||++||+|+|+|+||+|
T Consensus       236 ~~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~~i~MHpLP~~~~~~~~~~~~~~~~~pv~rg~EI~~~V~d~~~s~i~~Q  315 (333)
T 1duv_G          236 MGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQ  315 (333)
T ss_dssp             TTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCCSSCSHHHHHHHHHTTCCSBSSBBHHHHTSTTBCHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCEECHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCEECHHHHCCCCCHHHHH
T ss_conf             02222235666665116378799998647999499599987751011223101034688787586588857875589999


Q ss_pred             HHHHHHHHHHHHHHHHCC
Q ss_conf             775699999999999778
Q gi|254780300|r  290 VEMGVAVRMAIIKELLEN  307 (316)
Q Consensus       290 a~Nrl~~~~AlL~~~l~~  307 (316)
                      |+||+|+|||||.++|+.
T Consensus       316 a~Ngl~vr~AlL~~~l~k  333 (333)
T 1duv_G          316 AENRMHTIKAVMVATLSK  333 (333)
T ss_dssp             HHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHCC
T ss_conf             871299999999998577


No 6  
>2rgw_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, pyrimidine biosynthesis, thermostability; 2.80A {Methanococcus jannaschii} PDB: 3e2p_A
Probab=100.00  E-value=0  Score=624.74  Aligned_cols=295  Identities=33%  Similarity=0.490  Sum_probs=269.9

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC-CCCCC
Q ss_conf             77417822389999999999999999644204877521289769999607873378999979876135211123-33321
Q gi|254780300|r    6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININ-TKNSA   84 (316)
Q Consensus         6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~-~~~s~   84 (316)
                      |||||+++||+++||..||++|.++|+.+.... ..+.|+||+++++|+|||||||+|||+|+.+|||++++++ .++++
T Consensus         1 Mkh~l~~~dls~~ei~~ll~~A~~lK~~~~~~~-~~~~L~gk~vallF~kpStRTR~SFe~A~~~LGg~~i~l~~~~~s~   79 (306)
T 2rgw_A            1 MKHLISMKDIGKEEILEILDEARKMEELLNTKR-PLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSS   79 (306)
T ss_dssp             CCCBCCGGGCCHHHHHHHHHHHHHHHHHHHTTS-CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECCSSTTT
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             988477000999999999999999988760699-7744699989998647875068899999998599621255431133


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf             01333422479998741367146520321005542001234211112345663122332222222012221000100103
Q gi|254780300|r   85 MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC  164 (316)
Q Consensus        85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v  164 (316)
                      +++||+++||++|+|+| +|+|++|++.++.+.++++++++| |||||+|..+||||+|+|++||+|++|+++|++|+|+
T Consensus        80 ~~~~Es~~Dta~vls~~-~d~iviR~~~~~~~~~~a~~~~vP-VINAg~~~~~HP~QaLaDl~Ti~E~~g~l~glki~~v  157 (306)
T 2rgw_A           80 VAKGESLIDTIRVISGY-ADIIVLRHPSEGAARLASEYSQVP-IINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFV  157 (306)
T ss_dssp             TTTTCCHHHHHHHHHHH-CSEEEEECSSTTHHHHHHHHCSSC-EEECC----CCHHHHHHHHHHHHHHHSCSSSCEEEEE
T ss_pred             CCCCCCHHHHHHHHCCC-CCEEEEECCCCCCCHHHHHCCCCC-EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             56871499999661446-856999722233135778627762-4527888766818999989999998588558889998


Q ss_pred             CCCCCCCHHHHHHHHHHCC-CCEEEECCCCCCCCC-C------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHH
Q ss_conf             5544330133446642013-420553277532221-1------2123433005845603686221000113312333444
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTM-GARIRVIAPITLLPK-D------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLI  236 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~-g~~v~~~~P~~~~~~-~------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~  236 (316)
                      ||+.||||+||++.+++.+ |+++++++|+++.+. .      ..+..+.++++++++++++||||+++||+|++.+.  
T Consensus       158 GD~~~~~v~~S~~~~~~~~~~~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aDvv~~~~~~~e~~~~~--  235 (306)
T 2rgw_A          158 GDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDP--  235 (306)
T ss_dssp             SCTTTCHHHHHHHHHHTTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESSGGGCCTTCSEEEECCCCGGGCSSH--
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHEEEECCCCCCCCCCCH--
T ss_conf             056435317989999998489706986854754756777777623743675002554311110685224322468858--


Q ss_pred             HHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             4555420235758899983799859955899876874476797699701686877569999999999977814
Q gi|254780300|r  237 PSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQN  309 (316)
Q Consensus       237 ~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~  309 (316)
                      ..+.+++.+||||.++|+  +++++||||||  ||+||+++|+|+|+|+||+||+||+|+|||||+++|+++.
T Consensus       236 ~~~~~~~~~~~v~~~~l~--~~~~i~mHclP--Rg~Ev~~~V~d~p~s~i~~QaeNrl~~~~AiL~~ll~~n~  304 (306)
T 2rgw_A          236 NEYEKVKGSYKIKREYVE--GKKFIIMHPLP--RVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE  304 (306)
T ss_dssp             HHHHHHHHHHCBCHHHHT--TCSCEEECCSC--CSSSBCGGGTTSTTBCHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHCCHHHHHHHHC--CCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             899987263788999716--99989959998--8884488773687368999998639999999999972468


No 7  
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=100.00  E-value=0  Score=623.11  Aligned_cols=299  Identities=23%  Similarity=0.259  Sum_probs=274.6

Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77777417822389999999999999999644204877521289769999607873378999979876135211123333
Q gi|254780300|r    3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKN   82 (316)
Q Consensus         3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~   82 (316)
                      .|++||||+++||+++||+.||++|.++|+.+.... ..+.|+||+++++|+|||||||+|||+||.+|||+++++++++
T Consensus        25 ~~~gk~~l~~~d~s~~ei~~Ll~~A~~lK~~~~~~~-~~~~L~gK~v~llF~epSTRTR~SFe~A~~~LGg~~i~l~~~~  103 (359)
T 2w37_A           25 VFQGRSVLAEKDFSAAELEYLIDFGLHLKALKKAGI-PHHYLEGKNIALLFEKSSTRTRSAFTTASIDLGAHPEYLGQND  103 (359)
T ss_dssp             TTTTCCBCCGGGSCHHHHHHHHHHHHHHHHHHHHTC-CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             788988086011899999999999999998875699-8745799989999568971069999999998599689888765


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf             21013334224799987413671465203210055420012342111123456631223322222220122210001001
Q gi|254780300|r   83 SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIA  162 (316)
Q Consensus        83 s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia  162 (316)
                      |+++||||++||++|+|+| +|++|+|++.++.+.++++++++| ||||+++ .+||||+|+|++||+|.+|.++|++++
T Consensus       104 ss~~kgEs~~Dt~~~ls~y-~D~iv~R~~~~~~~~~~a~~~~vP-vIN~~~~-~~HPtQaL~Dl~Ti~e~~g~l~~~~i~  180 (359)
T 2w37_A          104 IQLGKKESTSDTAKVLGSM-FDGIEFRGFKQSDAEILARDSGVP-VWNGLTD-EWHPTQMLADFMTVKENFGKLQGLTLT  180 (359)
T ss_dssp             CCTTTSSCHHHHHHHHHHH-CSEEEEESSCHHHHHHHHHHSSSC-EEEEECS-SCCHHHHHHHHHHHHHHHSCCTTCEEE
T ss_pred             CCCCCCHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHHCCCC-EECCCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             6577742288999986404-644655155055699998614885-6657777-457899999999999983963575599


Q ss_pred             ECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             03554433013344664201342055327753222112-----------1234330058456036862210001133123
Q gi|254780300|r  163 ICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       163 ~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      |+||. ++||++|++.+++++|+++++++|+++.|...           .+..+++++|++||+++|||||+++||+|+.
T Consensus       181 ~vgd~-~~~v~~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~eal~~aDvIyt~~w~~~~~  259 (359)
T 2w37_A          181 FMGDG-RNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGE  259 (359)
T ss_dssp             EESCT-TSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTC
T ss_pred             EECCC-CCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEECCEEECCC
T ss_conf             98688-65715568999864699899957833488688999999999973986999789999974699999754763144


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHC---CCCCEEECCCCCCCCC-----------------CCCHHHHCCCCCHHHHHHH
Q ss_conf             3344445554202357588999837---9985995589987687-----------------4476797699701686877
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYA---KKDALVMHPGPINRNY-----------------EISSSVADGSQSIIQYQVE  291 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a---~~~ai~mHcLP~~Rg~-----------------Ev~~~v~d~~~s~v~~Qa~  291 (316)
                      ...  .+..+++.+||||.++|+++   +++++||||||++||.                 ||+++|+|+|+|+||+||+
T Consensus       260 ~~~--~~~~~~~~~y~v~~~~~~~~~~a~~~~i~MHpLP~~rg~~~~~~~~~~~~~~~~~~Eis~~V~d~p~s~i~~Qa~  337 (359)
T 2w37_A          260 SNW--EERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLPAFHNTDTQYGKEIKEKYGITEMEVTDEVFTSKYARQFEEAE  337 (359)
T ss_dssp             TTH--HHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSCCCCSSCSHHHHHHHHHHCCCCCSBCHHHHTSTTBCHHHHHH
T ss_pred             CCH--HHHHHHHHCCEECHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCEECHHHHCCCCCHHHHHHH
T ss_conf             346--788988735163499999863899894995999888885433230012113776737658884787415999987


Q ss_pred             HHHHHHHHHHHHHHCCC
Q ss_conf             56999999999997781
Q gi|254780300|r  292 MGVAVRMAIIKELLENQ  308 (316)
Q Consensus       292 Nrl~~~~AlL~~~l~~~  308 (316)
                      ||+|+|||||+|+||+-
T Consensus       338 Ngl~vrmAlL~~~lg~~  354 (359)
T 2w37_A          338 NRMHSIKAMMAATLGNL  354 (359)
T ss_dssp             HHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHCCC
T ss_conf             03999999999996677


No 8  
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00  E-value=0  Score=621.39  Aligned_cols=299  Identities=23%  Similarity=0.304  Sum_probs=273.5

Q ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC-CC
Q ss_conf             77774178223899999999999999996442048775212897699996078733789999798761352111233-33
Q gi|254780300|r    4 FPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT-KN   82 (316)
Q Consensus         4 f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~-~~   82 (316)
                      ..+||||+++||+++|+..||++|.++|+.+.+.   .+.|+||+++++|+|||||||+|||+|+.+|||+++++++ .+
T Consensus         5 ~~~khll~i~dls~~ei~~ll~~A~~~k~~~~~~---~~~l~~k~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~~   81 (328)
T 3grf_A            5 KQTRHLLTISALCPKELAYLIDRALDMKKNPAKY---TARAANKTLLAFFAKPSLRTRVSLETAMTRLGGHAIYYELGAN   81 (328)
T ss_dssp             CCSCCBSSGGGSCHHHHHHHHHHHHHHHHCGGGG---TTTTTTCEEEEEESSCCHHHHHHHHHHHHHHTCEEEEEEC---
T ss_pred             CCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCC---CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf             8788715143199999999999999987374445---6556898899996578731699999999985994786673201


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-------C
Q ss_conf             210133342247999874136714652032100554200123421111234566312233222222201222-------1
Q gi|254780300|r   83 SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKG-------K  155 (316)
Q Consensus        83 s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g-------~  155 (316)
                      |+++||||++||++++++| +|++++|++.++.+.++++++++| |||||++ ++||||+|+|++||+|++|       .
T Consensus        82 s~~~kgEs~~Dt~~~ls~~-~d~ivvR~~~~~~~~~~a~~~~vp-VINa~~~-~~HPtQaL~Dl~Ti~e~~g~~~~~~~~  158 (328)
T 3grf_A           82 SNVGGKETVQDTAEVFSRM-VDICTARLATKEMMREMAQHASVP-CINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNG  158 (328)
T ss_dssp             -------CHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHCSSC-EEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTT
T ss_pred             CCCCCCEEHHHHHHHHHCC-CCEEEEECCCHHHHHHHHHHCCCC-EECCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             2367862199999987334-653456525033566777507862-3547765-668269999999999984653334675


Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC---------------CCCCCCCCCCCHHHCCCCCCE
Q ss_conf             00010010355443301334466420134205532775322211---------------212343300584560368622
Q gi|254780300|r  156 ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD---------------ISNMGVEVFHDMQKGLKNVDV  220 (316)
Q Consensus       156 l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~---------------~~~~~~~~~~d~~ea~~~aDv  220 (316)
                      +++++|+|+||. ++||++|++.+++++|+++++++|+++.+..               ..+.++++++|+++++++|||
T Consensus       159 ~~~l~i~~~gd~-~~~v~~S~~~~~~~~g~~v~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDv  237 (328)
T 3grf_A          159 FKGIKFAYCGDS-MNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV  237 (328)
T ss_dssp             GGGCCEEEESCC-SSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred             CCCCEEEECCCC-CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCE
T ss_conf             136247632777-6542679999999779969996365335576699999999998763259839999679999617998


Q ss_pred             EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             10001133123334444555420235758899983799859955899876874476797699701686877569999999
Q gi|254780300|r  221 IMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAI  300 (316)
Q Consensus       221 v~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~Al  300 (316)
                      ||+++||+|++.++......+|+.+||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+||||
T Consensus       238 vy~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vrmAl  317 (328)
T 3grf_A          238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAV  317 (328)
T ss_dssp             EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHH
T ss_pred             EEEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             98501120333055579999876424643999963699998989989998880188885798756999997209999999


Q ss_pred             HHHHHCCCC
Q ss_conf             999977814
Q gi|254780300|r  301 IKELLENQN  309 (316)
Q Consensus       301 L~~~l~~~~  309 (316)
                      |+++|++..
T Consensus       318 L~~lL~~~k  326 (328)
T 3grf_A          318 LDFFLHDCK  326 (328)
T ss_dssp             HHHHHSCCC
T ss_pred             HHHHHHHCC
T ss_conf             999984166


No 9  
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=100.00  E-value=0  Score=620.14  Aligned_cols=302  Identities=27%  Similarity=0.349  Sum_probs=276.2

Q ss_pred             CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99777774178223899999999999999996442048775212897699996078733789999798761352111233
Q gi|254780300|r    1 MYSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININT   80 (316)
Q Consensus         1 m~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~   80 (316)
                      +.++.+||||+++||++++++.||++|..+|..+... ...+.|+||+++++|+|||||||+|||+|+.+|||+++++++
T Consensus         2 ~~~l~gk~ll~i~dls~~~i~~ll~~A~~lk~~~~~~-~~~~~L~gk~v~llF~epSTRTR~SFe~A~~~LG~~vi~~~~   80 (315)
T 1pvv_A            2 VVSLAGRDLLCLQDYTAEEIWTILETAKMFKIWQKIG-KPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNA   80 (315)
T ss_dssp             CCCCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHT-CCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTSEEEEEEG
T ss_pred             CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC
T ss_conf             9888899827511189999999999999998776458-976336999899984489730589999999976995432042


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             33210133342247999874136714652032100554200123421111234566312233222222201222100010
Q gi|254780300|r   81 KNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLH  160 (316)
Q Consensus        81 ~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~  160 (316)
                      ++|+++||||++||++++++| +|+||+||+.++.+.++++++++| ||| |+|..+||||+|+|++||+|++|.++|++
T Consensus        81 ~~ss~~kgEs~~Dt~~~ls~y-~D~iviR~~~~~~~~~~a~~s~vP-VIN-g~~~~~HPtQaL~Dl~Ti~e~~g~~~~l~  157 (315)
T 1pvv_A           81 QDLQLRRGETIADTARVLSRY-VDAIMARVYDHKDVEDLAKYATVP-VIN-GLSDFSHPCQALADYMTIWEKKGTIKGVK  157 (315)
T ss_dssp             GGSTTTTTCCHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHCSSC-EEE-EECSSCCHHHHHHHHHHHHHHHSCCTTCE
T ss_pred             CCCCCCCCCHHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHCCCC-EEE-CCCCCCCHHHHHHHHHHHHHHHCCCCCCE
T ss_conf             223477886098999997525-887888605710699999867998-896-99986467789876789998728756877


Q ss_pred             EEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEECCH
Q ss_conf             0103554433013344664201342055327753222112-----------12343300584560368622100011331
Q gi|254780300|r  161 IAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQE  229 (316)
Q Consensus       161 ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~~e  229 (316)
                      |+|+||  ++||+||++.+++++|+++++++|+++.|...           .+..+++++|++++++++||||++.|.++
T Consensus       158 i~~vGd--~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~~aDvvyt~~~~~~  235 (315)
T 1pvv_A          158 VVYVGD--GNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASM  235 (315)
T ss_dssp             EEEESC--CCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCS
T ss_pred             EEEECC--CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEHHHHHC
T ss_conf             999678--753156899999984187899889866886899999999998719859997699998557999954188764


Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             23334444555420235758899983799859955899876874476797699701686877569999999999977814
Q gi|254780300|r  230 RIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQN  309 (316)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~  309 (316)
                      .. +....+..+|+..||||.++|+.++++++||||||++||+||+++|+|+|+|+||+||+||+|+|||||+++||+..
T Consensus       236 ~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~i~mHplP~~Rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~~lgg~~  314 (315)
T 1pvv_A          236 GQ-EAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGGIK  314 (315)
T ss_dssp             ST-TSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             CC-CCCHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             66-10259999877635633999944899989989999878870088886699776999997019999999999976886


No 10 
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=100.00  E-value=0  Score=617.33  Aligned_cols=299  Identities=23%  Similarity=0.294  Sum_probs=273.6

Q ss_pred             CC-CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             99-77777417822389999999999999999644204877521289769999607873378999979876135211123
Q gi|254780300|r    1 MY-SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININ   79 (316)
Q Consensus         1 m~-~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~   79 (316)
                      |. ++.+||||+++||+++|++.||++|.++|..+... ...+.|+||+++++|+|||||||+|||+|+.+|||++++++
T Consensus        13 m~~~l~gk~llsi~dls~~ei~~ll~~A~~lk~~~~~~-~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~~~   91 (325)
T 1vlv_A           13 MSVNLKGRSLLTLLDFSPEEIRYLLDISKQVKMENRSK-LRTERFKGMTLAMIFEKRSTRTRLAFETAFAEEGGHPIFLS   91 (325)
T ss_dssp             CCCCCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHT-CCCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECC
T ss_conf             56778899808511089999999999999997642247-77645799889998568975378999999998398589746


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             33321013334224799987413671465203210055420012342111123456631223322222220122210001
Q gi|254780300|r   80 TKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNL  159 (316)
Q Consensus        80 ~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l  159 (316)
                      +.+|+++||||++||++|+++| +|++++|++.++.+..+++++++| |||||++ .+||||+|+|+|||+|.+|.++|+
T Consensus        92 ~~~ss~~kgEsl~Dt~~~ls~y-~D~ivvR~~~~~~~~~~a~~~~vP-VINa~~~-~~HPtQaLlDl~Ti~e~~g~l~gl  168 (325)
T 1vlv_A           92 PNDIHLGAKESLEDTARVLGRM-VDAIMFRGYKQETVEKLAEYSGVP-VYNGLTD-EFHPTQALADLMTIEENFGRLKGV  168 (325)
T ss_dssp             TTTCCTTTSSCHHHHHHHHHTT-CSEEEEESSCHHHHHHHHHHHCSC-EEESCCS-SCCHHHHHHHHHHHHHHHSCSTTC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHCCCC-EECCCCC-CCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             6433567885368999999851-651577404420466666506764-1417888-777899999999999983974567


Q ss_pred             CEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEECC
Q ss_conf             00103554433013344664201342055327753222112-----------1234330058456036862210001133
Q gi|254780300|r  160 HIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQ  228 (316)
Q Consensus       160 ~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~~  228 (316)
                      +|+|+||+. +++++|++.+++++|+++++++|+++.|+..           .+..+++++++++|+++|||||+++|+.
T Consensus       169 ~i~~vGd~~-~~~~~s~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aDvvyt~~~~~  247 (325)
T 1vlv_A          169 KVVFMGDTR-NNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWAS  247 (325)
T ss_dssp             EEEEESCTT-SHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC-
T ss_pred             CCEEECCCC-CCEEEHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCEEEEHHHHH
T ss_conf             725766875-5375319999997598499973843388889999876554423764201069999970698664016667


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHH-CCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             123334444555420235758899983-79985995589987687447679769970168687756999999999997
Q gi|254780300|r  229 ERIPRSLIPSIREYKHVYSLDEKKLKY-AKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL  305 (316)
Q Consensus       229 e~~~~~~~~~~~~~~~~~~v~~~~l~~-a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l  305 (316)
                      ++.... .....+++.+||||.++|+. ++++++||||||++||+||+++|+|+|+|+||+||+||+|+|||||.++|
T Consensus       248 ~~~~~~-~~~~~~~~~~y~v~~~~l~~~ak~~~i~mHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vr~AlL~~lL  324 (325)
T 1vlv_A          248 MGEEDK-EKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKHTIKAVMIATL  324 (325)
T ss_dssp             ----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHHCCCCEECHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             545466-68998760375056999972189998996998489984828878569987399998725999999999986


No 11 
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=100.00  E-value=0  Score=613.07  Aligned_cols=302  Identities=22%  Similarity=0.236  Sum_probs=276.3

Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             97777741782238999999999999999964420487752128976999960787337899997987613521112333
Q gi|254780300|r    2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTK   81 (316)
Q Consensus         2 ~~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~   81 (316)
                      .|+.+||||+++||+++||+.||++|.++|+.+.+... .+.|+||+++++|+|||||||+|||+|+.+|||++++++++
T Consensus         2 ~~m~~k~llsi~dls~~ei~~ll~~A~~lk~~~~~~~~-~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~~~~~   80 (335)
T 1dxh_A            2 FNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTE-QQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPN   80 (335)
T ss_dssp             CCCTTCCBSSSTTCCHHHHHHHHHHHHHHHHHHHHTCC-CCCCTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCC
T ss_conf             99999895770129999999999999999866645887-65579998999956897017999999999859909978853


Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf             32101333422479998741367146520321005542001234211112345663122332222222012221000100
Q gi|254780300|r   82 NSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHI  161 (316)
Q Consensus        82 ~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~i  161 (316)
                      +||++||||++||++|+|+| +|++++|++.++.+..+++++++| ||||+++ ++||||+|+|+|||+|++|.+.+.++
T Consensus        81 ~ss~~kgEsl~Dt~~~ls~y-~D~iviR~~~~~~~~~~a~~~~vP-VIN~~~~-~~HPtQaLlDl~Ti~e~~g~~~~~~~  157 (335)
T 1dxh_A           81 SSQIGHKESMKDTARVLGRM-YDAIEYRGFKQEIVEELAKFAGVP-VFNGLTD-EYHPTQMLADVLTMREHSDKPLHDIS  157 (335)
T ss_dssp             TCCBTTTBCHHHHHHHHHHH-CSEEEEECSCHHHHHHHHHHSSSC-EEEEECS-SCCHHHHHHHHHHHHHTCSSCGGGCE
T ss_pred             CCCCCCCCCHHHHHHHHHHC-CCCEEEECHHHHHHHHHHHHCCCC-EEECCCC-CCCHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             34356674588999987622-560355410577799986414786-6626998-75556999999999986174436857


Q ss_pred             EECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEECCHH
Q ss_conf             103554433013344664201342055327753222112-----------123433005845603686221000113312
Q gi|254780300|r  162 AICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQER  230 (316)
Q Consensus       162 a~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~  230 (316)
                      +++||..++||+||++.+++++|+++++++|+++.|.+.           .+..+++++|++++++++||||+++|++|+
T Consensus       158 ~~~~~~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvv~t~~~~~~~  237 (335)
T 1dxh_A          158 YAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMG  237 (335)
T ss_dssp             EEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSS
T ss_pred             EEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEECC
T ss_conf             99856887651479999999779869996685457878999999999997499899984999983679889877777524


Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHH-HCCCCCEEECCCCCC-------------------CCCCCCHHHHCCCCCHHHHHH
Q ss_conf             333444455542023575889998-379985995589987-------------------687447679769970168687
Q gi|254780300|r  231 IPRSLIPSIREYKHVYSLDEKKLK-YAKKDALVMHPGPIN-------------------RNYEISSSVADGSQSIIQYQV  290 (316)
Q Consensus       231 ~~~~~~~~~~~~~~~~~v~~~~l~-~a~~~ai~mHcLP~~-------------------Rg~Ev~~~v~d~~~s~v~~Qa  290 (316)
                      +..+......+++.+||||.++|+ .++++++||||||++                   ||+||+++|+|+|+|+||+||
T Consensus       238 ~~~~~~~~~~~~~~~~~v~~e~l~~~a~~~~i~mH~lP~~~~~~~~~~~~~~~~~p~~~rg~Ei~~~v~d~p~s~i~~Qa  317 (335)
T 1dxh_A          238 EPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQA  317 (335)
T ss_dssp             SCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSCCCCSSSSHHHHHHHHHCGGGGGBSSBBHHHHTSTTBCHHHHH
T ss_pred             CHHHHHHHHHHHHCCCEECHHHHHHCCCCCEEEECCCCCCCCHHHCCCCHHHHHCCCCCCCCEECHHHHCCCCCHHHHHH
T ss_conf             21333467776521223339999851799959968997764112102430133178888771865889579975799999


Q ss_pred             HHHHHHHHHHHHHHHCC
Q ss_conf             75699999999999778
Q gi|254780300|r  291 EMGVAVRMAIIKELLEN  307 (316)
Q Consensus       291 ~Nrl~~~~AlL~~~l~~  307 (316)
                      +||+|+|||||+++|++
T Consensus       318 ~Ng~~vrmAiL~~llg~  334 (335)
T 1dxh_A          318 ENRMHTIKAILVSTLAD  334 (335)
T ss_dssp             HHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHCC
T ss_conf             73499999999998615


No 12 
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=100.00  E-value=0  Score=610.37  Aligned_cols=304  Identities=20%  Similarity=0.220  Sum_probs=276.9

Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77777417822389999999999999999644204877521289769999607873378999979876135211123333
Q gi|254780300|r    3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKN   82 (316)
Q Consensus         3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~   82 (316)
                      ++++||||+++||+++|++.||++|.++|....+.+...+.|+||+++++|+|||||||+|||+|+.+|||+++++++.+
T Consensus         3 ~l~~k~lLsi~dls~~ei~~ll~~A~~~k~~~~~~~~~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~   82 (321)
T 1oth_A            3 QLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQD   82 (321)
T ss_dssp             CCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHTTCCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred             CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             89999928700089999999999999999887527876744699889998668975549999999997799779567421


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf             21013334224799987413671465203210055420012342111123456631223322222220122210001001
Q gi|254780300|r   83 SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIA  162 (316)
Q Consensus        83 s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia  162 (316)
                      |+++||||++||++|+++|+ |++++|++.++.+.++++++++| |||| +|.++||||+|+|+|||+|++|.++|++|+
T Consensus        83 ss~~kgEsl~Dt~~~ls~~~-d~ivvR~~~~~~~~~~~~~~~vp-Ving-~~~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~  159 (321)
T 1oth_A           83 IHLGVNESLTDTARVLSSMA-DAVLARVYKQSDLDTLAKEASIP-IING-LSDLYHPIQILADYLTLQEHYSSLKGLTLS  159 (321)
T ss_dssp             SCBTTTBCHHHHHHHHHHHC-SEEEEECSCHHHHHHHHHHCSSC-EEES-CCSSCCHHHHHHHHHHHHHHHSCCTTCEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHCCCC-EECC-CCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             34676402899999998616-51588730230088886405787-5647-886546889999999999986887787799


Q ss_pred             ECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----------CCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             03554433013344664201342055327753222112-----------1234330058456036862210001133123
Q gi|254780300|r  163 ICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       163 ~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~-----------~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      ||||  ++||+||++.+++++|+++++++|+++.|...           .+..+.+++|+.+++.++|+||++.|.+++.
T Consensus       160 ~vGD--~~~v~~S~~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~~d~v~~~~~~~~~~  237 (321)
T 1oth_A          160 WIGD--GNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGR  237 (321)
T ss_dssp             EESC--SSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTC
T ss_pred             EECC--CCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEEEEECHH
T ss_conf             9768--76635699999875088479984577687589999999999964998999738899850688799986673115


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             33444455542023575889998379985995589987687447679769970168687756999999999997781422
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNKI  311 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~~  311 (316)
                      ..+ .....+++..|+||.++|+.++++++|||||| +||+||+++|+++|+|+||+||+||+|+|||||+++|++.+.-
T Consensus       238 ~~~-~~~~~~~~~~y~i~~~~l~~~~~~~i~mHplP-~rg~EI~~~V~~~~~s~i~~Qa~Ngl~vrmAlL~~lL~~~~~~  315 (321)
T 1oth_A          238 EEE-KKKRLQAFQGYQVTMKTAKVAASDWTFLHCLP-RKPEEVDDEVFYSPRSLVFPEAENRKWTIMAVMVSLLTDYSPQ  315 (321)
T ss_dssp             GGG-HHHHHHHTTTCCBCHHHHHTSCTTCEEEECSC-CCTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC-CCCCCCCHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCC
T ss_conf             555-78888888888888999955799989979999-9998208888579987799998640999999999986576775


Q ss_pred             CC
Q ss_conf             20
Q gi|254780300|r  312 TQ  313 (316)
Q Consensus       312 ~~  313 (316)
                      -|
T Consensus       316 ~~  317 (321)
T 1oth_A          316 LQ  317 (321)
T ss_dssp             SC
T ss_pred             CC
T ss_conf             57


No 13 
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis; 2.10A {Gloeobacter violaceus pcc 7421}
Probab=100.00  E-value=0  Score=613.33  Aligned_cols=297  Identities=25%  Similarity=0.336  Sum_probs=272.8

Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77777417822389999999999999999644204877521289769999607873378999979876135211123333
Q gi|254780300|r    3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKN   82 (316)
Q Consensus         3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~   82 (316)
                      +-.+||||+++||+++||..||++|.++|+.+     ..+.|+||+++++|+|||||||+|||+|+.+|||+++++++++
T Consensus        10 ~~~~k~ll~i~dls~~ei~~ll~~A~~lk~~~-----~~~~L~gK~v~llF~epSTRTR~SFe~A~~~LGg~vi~~~~~~   84 (323)
T 3gd5_A           10 TRFRPDLLSLDDLDEAQLHALLTLAHQLKRGE-----RVANLHGKVLGLVFLKASTRTRVSFTVAMYQLGGQVIDLSPSN   84 (323)
T ss_dssp             CCCCSCBSSGGGSCHHHHHHHHHHHHHHHHTS-----SCCCCTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEC----
T ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCC-----CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             66688874222189999999999999987367-----6777899989999668971169999999998599199635422


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf             21013334224799987413671465203210055420012342111123456631223322222220122210001001
Q gi|254780300|r   83 SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIA  162 (316)
Q Consensus        83 s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia  162 (316)
                      |+++||||++||++++++| .|++++|++.++.+.++++++++| |||||++ .+||||+|+|++||+|.+|.++|++|+
T Consensus        85 ss~~kgEs~~Dt~~~ls~~-~d~iv~R~~~~~~~~~~a~~s~vP-VINag~~-~~HPtQaLlDl~Ti~e~~g~l~gl~i~  161 (323)
T 3gd5_A           85 TQVGRGEPVRDTARVLGRY-VDGLAIRTFAQTELEEYAHYAGIP-VINALTD-HEHPCQVVADLLTIRENFGRLAGLKLA  161 (323)
T ss_dssp             ------CCHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHHCSC-EEEEECS-SCCHHHHHHHHHHHHHHHSCCTTCEEE
T ss_pred             CCCCCCCCHHHHHHHHHCC-CHHHHEECCHHHHHHHHHHCCCCC-EEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             4457763037799998522-114321000056799985217977-6858887-416899998899999985874688799


Q ss_pred             ECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             0355443301334466420134205532775322211-----------21234330058456036862210001133123
Q gi|254780300|r  163 ICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       163 ~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      |+||  ++||++|++.+++++|+++.+++|+++.+..           ..+..+.+++|++++++++|+||+++|++++.
T Consensus       162 ~vGd--~~~v~~S~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDviyt~~~~~~~~  239 (323)
T 3gd5_A          162 YVGD--GNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQ  239 (323)
T ss_dssp             EESC--CCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC----
T ss_pred             EECC--CCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCEEEEEHHHHHCC
T ss_conf             9788--65534559999864698089973876688789999999987633881000278999955798766311323101


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             3344445554202357588999837998599558998768744767976997016868775699999999999778142
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLENQNK  310 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~~~  310 (316)
                      .... ....+|+.+||||+++|+.++++++||||||++||+||+++|+|+|+|+||+||+||+|+|||||+++||++.-
T Consensus       240 ~~~~-~~~~~~~~~y~vt~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~~~~Qa~Ngl~vr~AlL~~llgg~~~  317 (323)
T 3gd5_A          240 EAET-QHRLQLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDEVMEGPRSRIWDEAENRLHAQKAVLAALMGGREG  317 (323)
T ss_dssp             ------CCHHHHTTCCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             CHHH-HHHHHHHCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             0334-56887640002529999537989899898999888534878865998679999971199999999999778967


No 14 
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=100.00  E-value=0  Score=608.60  Aligned_cols=295  Identities=25%  Similarity=0.285  Sum_probs=270.5

Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             77741782238999999999999999964420487752128976999960787337899997987613521112333321
Q gi|254780300|r    5 PLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSA   84 (316)
Q Consensus         5 ~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~   84 (316)
                      -|||||+++||+++||..||++|.++|+.+.+.   ...++||+++++|+|||||||+|||+|+.+|||+++++++.+++
T Consensus         1 ~mkh~l~i~dls~~ei~~ll~~A~~lk~~~~~~---~~~l~~k~v~llF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ss   77 (307)
T 2i6u_A            1 VIRHFLRDDDLSPAEQAEVLELAAELKKDPVSR---RPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQ   77 (307)
T ss_dssp             CCCCBSSGGGSCHHHHHHHHHHHHHHHHSTTSC---CTTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEEGGGSG
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC---CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf             973569810099999999999999986274346---74467977999967997543999999999869918517754356


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf             01333422479998741367146520321005542001234211112345663122332222222012221000100103
Q gi|254780300|r   85 MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC  164 (316)
Q Consensus        85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v  164 (316)
                      ++||||++||+++++.| +|++|+|++.++.+.++++++++| |||||++ .+||||+|+|++||+|.+|.++|++|+||
T Consensus        78 ~~kgEs~~Dt~~~l~~~-~d~iv~R~~~~~~~~~~a~~~~vP-VINag~~-~~HPtQaLlDl~Ti~e~~g~l~gl~i~~v  154 (307)
T 2i6u_A           78 LGRDETLQDTAKVLSRY-VDAIVWRTFGQERLDAMASVATVP-VINALSD-EFHPCQVLADLQTIAERKGALRGLRLSYF  154 (307)
T ss_dssp             GGGTCCHHHHHHHHHHH-EEEEEEECSSHHHHHHHHHHCSSC-EEESCCS-SCCHHHHHHHHHHHHHHHSCCTTCEEEEE
T ss_pred             CCCCCCHHHHHHHHHCC-CCCEEEECHHHHHHHHHHHHCCCC-EEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             78898599999997442-220134102345699998727876-4647998-87768999999999998589789889997


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-----------CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHH
Q ss_conf             55443301334466420134205532775322211-----------2123433005845603686221000113312333
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-----------ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPR  233 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-----------~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~  233 (316)
                      ||+.| ++++|++.++.++|+++++++|+++.|..           ..+..++++++++++++++||||+++|++++...
T Consensus       155 Gd~~~-~~~~s~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvv~~~~~~~~~~~~  233 (307)
T 2i6u_A          155 GDGAN-NMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQEN  233 (307)
T ss_dssp             SCTTS-HHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTT
T ss_pred             CCCCC-CHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEEEEEEEECCCC
T ss_conf             78887-71507999998669858725872348888999999988886188518964688886489889975215301323


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             44445554202357588999837998599558998768744767976997016868775699999999999778
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLEN  307 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~  307 (316)
                      ... ...++...||+|.++|+.++++++||||||++||+||+++|+|+|+|+||+||+||+|+|||||+++|+.
T Consensus       234 ~~~-~~~~~~~~~~l~~~~l~~a~~~~ivmHplP~~R~~Ei~~~v~~~~~s~~~~Qa~ngl~vrmAlL~~ll~~  306 (307)
T 2i6u_A          234 DGL-DRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLER  306 (307)
T ss_dssp             SCC-CSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCH-HHCCCCCCEEECHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHC
T ss_conf             320-1124466256669999517989699898998678766867856996579999876299999999999826


No 15 
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=100.00  E-value=0  Score=604.09  Aligned_cols=293  Identities=31%  Similarity=0.456  Sum_probs=264.7

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC-CCCCCC
Q ss_conf             7741782238999999999999999964420487752128976999960787337899997987613521112-333321
Q gi|254780300|r    6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVINI-NTKNSA   84 (316)
Q Consensus         6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l-~~~~s~   84 (316)
                      |||||+++||+++|+..||++|.++|+.+..   ..+.|+||+++++|+|||||||+|||+|+++|||+++++ ++++++
T Consensus         1 mkh~l~~~dls~~ei~~ll~~A~~~k~~~~~---~~~~l~gk~v~llF~k~StRTR~SFe~A~~~LGg~~i~~~~~~~~~   77 (299)
T 1pg5_A            1 LKHIISAYNFSRDELEDIFALTDKYSKNLND---TRKILSGKTISIAFFEPSTRTYLSFQKAIINLGGDVIGFSGEESTS   77 (299)
T ss_dssp             CCCBCSGGGCCHHHHHHHHHHHHHHHSCCTT---CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEECC----
T ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC---CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             9884860118999999999999999760166---6655799989999627873169999999998099621366631100


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf             01333422479998741367146520321005542001234211112345663122332222222012221000100103
Q gi|254780300|r   85 MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC  164 (316)
Q Consensus        85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v  164 (316)
                      +++|||++||++|+|+| +|+|++|++.+..+.++++++++| |||||++.++||||+|+|++||+|++|++++++++|+
T Consensus        78 ~~~~Es~~Dt~~vls~~-~d~i~~R~~~~~~~~~~~~~s~vP-vINAg~~~~~HPtQ~LaDl~Ti~e~~g~~~~l~i~~~  155 (299)
T 1pg5_A           78 VAKGENLADTIRMLNNY-SDGIVMRHKYDGASRFASEISDIP-VINAGDGKHEHPTQAVIDIYTINKHFNTIDGLVFALL  155 (299)
T ss_dssp             ---CCCHHHHHHHHHHH-CSEEEEEESSBTHHHHHHHHCSSC-EEEEEETTTBCHHHHHHHHHHHHHHHSCSTTCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHCCCC-EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             57875199999998625-744898842320688877635773-1117776777856899999999998388555637885


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCEEE-ECCCCCCCCCC----CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHH
Q ss_conf             554433013344664201342055-32775322211----2123433005845603686221000113312333444455
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTMGARIR-VIAPITLLPKD----ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSI  239 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~g~~v~-~~~P~~~~~~~----~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~  239 (316)
                      ||..|+||+||++.+++++|+.+. +++|+.+.+..    ..+..+..++++.++++++|+||+++|+.|++....  ..
T Consensus       156 gd~~~~~v~~S~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvvy~~~~~~~~~~~~~--~~  233 (299)
T 1pg5_A          156 GDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEM--EY  233 (299)
T ss_dssp             ECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHH--HH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCHHH--HH
T ss_conf             1776105778899999874886311258301354577765406874335698887078766875032224543078--88


Q ss_pred             HHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             54202357588999837998599558998768744767976997016868775699999999999778
Q gi|254780300|r  240 REYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLEN  307 (316)
Q Consensus       240 ~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~~  307 (316)
                      ++++..||||.++|+.++++++||||||  ||+||+++|+|+|+|+||+||+||+|+|||||.|+||.
T Consensus       234 ~~~~~~~~v~~~~~~~~~~~~ifmHcLP--rg~Ev~~~V~d~~~s~v~~Qa~Nrl~~~~AlL~~llg~  299 (299)
T 1pg5_A          234 EKIKGSYIVSLDLANKMKKDSIILHPLP--RVNEIDRKVDKTTKAKYFEQASYGVPVRMSILTKIYGE  299 (299)
T ss_dssp             HHHGGGGSBCHHHHHTSCTTCEEECCSC--CSSSBCGGGGGSTTBCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEECCCC--CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             8988887641999972698979979999--98762877746874779999981499999999998088


No 16 
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=100.00  E-value=0  Score=596.59  Aligned_cols=296  Identities=23%  Similarity=0.337  Sum_probs=256.5

Q ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             77777417822389999999999999999644204877521289769999607873378999979876135211123333
Q gi|254780300|r    3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKN   82 (316)
Q Consensus         3 ~f~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~   82 (316)
                      ++.|||||+++||+++|++.||++|.++|+.+     ..+.|+||+++++|+|||||||+|||+||.+|||+++++++..
T Consensus        20 ~m~mkhlLsi~dls~~ei~~l~~~A~~~k~~~-----~~~~L~gk~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~   94 (359)
T 1zq6_A           20 HMSLKHFLNTQDWSRAELDALLTQAALFKRNK-----LGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGK   94 (359)
T ss_dssp             ---CCCBSCGGGSCHHHHHHHHHHHHHHHHCC-----CCCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECHHH
T ss_pred             CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCC-----CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             88666507523399999999999999998367-----8766899989998558971089999999998599589827877


Q ss_pred             ------------CCCCCCCCCCCHHHHHHHHCCCCEEEECC----------CCCHHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf             ------------21013334224799987413671465203----------21005542001234211112345663122
Q gi|254780300|r   83 ------------SAMKKGENIADTIATLNALRPNIIVIRHP----------YSGAVNSLMHKIKGPSIINAGDGTHEHPS  140 (316)
Q Consensus        83 ------------s~~~kgEs~~Dta~vls~~~~d~iv~R~~----------~~~~~~~~a~~~s~ppVINag~~~~~HP~  140 (316)
                                  ++.++|||++||++++++| +|+||+|++          .++.+.++++++++| |||+|  .++|||
T Consensus        95 s~~~~~~~~~s~~~~~~~Es~~Dt~~~ls~y-~D~iviR~~~~~~~~~~~~~~~~~~~~a~~~~vp-vin~g--~~~HPt  170 (359)
T 1zq6_A           95 DAWPIEFNLGTVMDGDTEEHIAEVARVLGRY-VDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVP-VINME--TITHPC  170 (359)
T ss_dssp             HSCCEECSSSCCCCSSCCEEHHHHHHHHHHH-CSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSC-EEESS--SSCCHH
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC-CCCCC--CCCCCH
T ss_conf             6442134666320366415799999987524-8789996364322200460168999999767986-21688--877854


Q ss_pred             HHHHHHHHHHCCCCC--CCCCC----EEECCCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCCCCC-----------CCC
Q ss_conf             332222222012221--00010----010355443301334466420134205532775-322211-----------212
Q gi|254780300|r  141 QALLDAFAIRHFKGK--ISNLH----IAICGDILHSRVARSDIMLLNTMGARIRVIAPI-TLLPKD-----------ISN  202 (316)
Q Consensus       141 Q~LaDl~Ti~e~~g~--l~~l~----ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~-~~~~~~-----------~~~  202 (316)
                      |+|+|+|||+|.||.  ++|++    ++|+||+.||||++|++.+++++|+++++++|+ .+.|..           ..+
T Consensus       171 QaLlDl~Ti~e~~g~~~~~g~~~~~~~~~~gd~~~~~v~~S~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g  250 (359)
T 1zq6_A          171 QELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG  250 (359)
T ss_dssp             HHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             78999999999719832258637898511478554378888888898759879998068435888899999877788708


Q ss_pred             CCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHH--HHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHC
Q ss_conf             3433005845603686221000113312333444--45554202357588999837998599558998768744767976
Q gi|254780300|r  203 MGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLI--PSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVAD  280 (316)
Q Consensus       203 ~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~--~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d  280 (316)
                      ..+++++|+++++++|||||+++||+|++.+...  ....++...|++|+++++.+ ++++||||||++||+||+++|+|
T Consensus       251 ~~i~~~~d~~ea~~~aDvvyt~~~q~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~~~i~MHplP~~Rg~EI~~eV~d  329 (359)
T 1zq6_A          251 GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALT-NNGVFSHCLPLRRNVKATDAVMD  329 (359)
T ss_dssp             CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTS-SSCEEECCSCCCBTTTBCHHHHT
T ss_pred             CCEEEECCHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCC-CCCEEECCCCCCCCCCCCHHHHC
T ss_conf             86189558889845966999853773011540356799999876348279996378-99989899999998833876757


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9970168687756999999999997781
Q gi|254780300|r  281 GSQSIIQYQVEMGVAVRMAIIKELLENQ  308 (316)
Q Consensus       281 ~~~s~v~~Qa~Nrl~~~~AlL~~~l~~~  308 (316)
                      +|+|+||+||+||+|+|||||+++||..
T Consensus       330 ~p~s~i~~Qa~Ngl~vrmAlL~~llg~~  357 (359)
T 1zq6_A          330 SPNCIAIDEAENRLHVQKAIMAALVGQS  357 (359)
T ss_dssp             STTBCHHHHHHHHHHHHHHHHHHHC---
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9975699998730999999999985788


No 17 
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8}
Probab=100.00  E-value=0  Score=595.63  Aligned_cols=292  Identities=22%  Similarity=0.290  Sum_probs=268.4

Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             77741782238999999999999999964420487752128976999960787337899997987613521112333321
Q gi|254780300|r    5 PLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSA   84 (316)
Q Consensus         5 ~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~   84 (316)
                      .+||||+++||+++||+.||++|.++|+.+..    .+.|+||+++++|+|||||||+|||.|+.+|||++++++..+||
T Consensus         8 m~k~ll~i~dls~~~i~~ll~~A~~lk~~~~~----~~~L~gk~v~llF~epSTRTR~SFe~A~~~LGg~~i~~~~~~ss   83 (301)
T 2ef0_A            8 LPKDLLDFSGYGPKELQALLDLAEQLKRERYR----GEDLKGKVLALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQKQVG   83 (301)
T ss_dssp             CCSCBSSSTTCCHHHHHHHHHHHHHHHHHTCC----CCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEGGGSC
T ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCC----CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCC
T ss_conf             77464862229999999999999998746335----77579988999854787306999999999679988975643334


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEC
Q ss_conf             01333422479998741367146520321005542001234211112345663122332222222012221000100103
Q gi|254780300|r   85 MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAIC  164 (316)
Q Consensus        85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~v  164 (316)
                      ++||||++||++|+++| .|++++|++.++.+.++++++++| |||||++ .+||||+|+|+|||+|.+|.++|++|+|+
T Consensus        84 ~~kgEs~~Dt~~~l~~~-~d~iviR~~~~~~~~~~a~~s~vp-VINa~~~-~~HPtQaLlDl~Ti~e~~g~~~~l~i~~v  160 (301)
T 2ef0_A           84 IGEREPVRDVAKNLERF-VEGIAARVFRHETVEALARHAKVP-VVNALSD-RAHPLQALADLLTLKEVFGGLAGLEVAWV  160 (301)
T ss_dssp             TTTCCCHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHCSSC-EEEEECS-SCCHHHHHHHHHHHHHHHSCCTTCEEEEE
T ss_pred             CCCCCCHHHHHHHHHHC-CCCCEEEEECCHHHHHHHHHCCCC-EEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             45445199999986512-674007983400099999867898-7838887-52598999889999998687568705986


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC--CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf             55443301334466420134205532775322211--2123433005845603686221000113312333444455542
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD--ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREY  242 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~--~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~  242 (316)
                      ||  ++||.+|++.++..+|+++++++|+++.+..  ........++|+++++.++|+||+++|+.++...++....++|
T Consensus       161 Gd--~~~v~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~d~~e~~~~ad~v~~d~~~~~~~~~e~~~~~~~~  238 (301)
T 2ef0_A          161 GD--GNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDF  238 (301)
T ss_dssp             SC--CCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC--------CHHHHHT
T ss_pred             CC--CCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCEECCHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHH
T ss_conf             37--6752678999999739955760587677898998642673004688864588778975154432367789999988


Q ss_pred             CCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             0235758899983799859955899876874476797699701686877569999999999977
Q gi|254780300|r  243 KHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLE  306 (316)
Q Consensus       243 ~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~AlL~~~l~  306 (316)
                       ..||||.++|+.++++++||||||++||+||+++|+|+|+|+||+||+||+|+|||||+++|+
T Consensus       239 -~~y~l~~~~l~~~~~~~i~mHplP~~rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~lLk  301 (301)
T 2ef0_A          239 -QGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRVFDQAENRLHTAKAVLLTLLK  301 (301)
T ss_dssp             -TTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -HHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             -756463999960898969979999988976787784698568999998439999999999869


No 18 
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=100.00  E-value=0  Score=594.08  Aligned_cols=294  Identities=20%  Similarity=0.244  Sum_probs=263.0

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-
Q ss_conf             7741782238999999999999999964420487752128976999960787337899997987613521112333321-
Q gi|254780300|r    6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSA-   84 (316)
Q Consensus         6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~-   84 (316)
                      |||||+++||+  ||..||++|.++|+.+.++   .+.|+||+++++|+|||||||+|||+|+.+|||+++++++.+|+ 
T Consensus         1 Mk~~i~i~Dls--di~~ll~~a~~~k~~~~~~---~~~l~gK~va~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~   75 (324)
T 1js1_X            1 MKKFTCVQDIG--DLKSALAESFEIKKDRFKY---VELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAW   75 (324)
T ss_dssp             CCCBSSGGGGC--CHHHHHHHHHHHHHSTTTT---TTTTTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEECCGGGC
T ss_pred             CCCCCCHHHHH--HHHHHHHHHHHHHHCCCCC---CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf             98747523389--9999999999998374435---655799889999678971269999999998499699737887632


Q ss_pred             -----------CCCCCCCCCHHHHHHHHCCCCEEEECCCC----------CHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             -----------01333422479998741367146520321----------005542001234211112345663122332
Q gi|254780300|r   85 -----------MKKGENIADTIATLNALRPNIIVIRHPYS----------GAVNSLMHKIKGPSIINAGDGTHEHPSQAL  143 (316)
Q Consensus        85 -----------~~kgEs~~Dta~vls~~~~d~iv~R~~~~----------~~~~~~a~~~s~ppVINag~~~~~HP~Q~L  143 (316)
                                 .+||||++||++++|+| +|+|++|++.+          ..+.++++++++| ||| |+|..+||||+|
T Consensus        76 ~~~~~~~~~~~~~k~Es~~DT~~vls~~-~D~iv~R~~~~~~~~~~~~~~~~~~~~a~~s~vP-ViN-g~~~~~HPtQaL  152 (324)
T 1js1_X           76 KLETERGVIMDGDKPEHLLEAIPVMGCY-CDIIGVRSFARFENREYDYNEVIINQFIQHSGRP-VFS-MEAATRHPLQSF  152 (324)
T ss_dssp             CEECCSSCCCCSSCCEEHHHHHHHHHHT-CSEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSC-EEE-SSCSSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHH-CCEEEEEECCHHHHHHHCCHHHHHHHHHHHCCCC-EEC-CCCCCCCHHHHH
T ss_conf             1234543000377776499999999861-6425887322134343100057999999852785-347-888766768999


Q ss_pred             HHHHHHHCCCCCCCCCCEEECCC---CCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCE
Q ss_conf             22222201222100010010355---443301334466420134205532775322211212343300584560368622
Q gi|254780300|r  144 LDAFAIRHFKGKISNLHIAICGD---ILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDV  220 (316)
Q Consensus       144 aDl~Ti~e~~g~l~~l~ia~vGD---~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDv  220 (316)
                      +|+|||+|++|.++|++++++|+   .+++||++|++.+++++|+++.+++|+++.+.......+++++|+.+++++||+
T Consensus       153 ~Dl~Ti~e~~g~~~~~~~~~~~~~~~~~~~~v~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~d~~~a~~~aDv  232 (324)
T 1js1_X          153 ADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADF  232 (324)
T ss_dssp             HHHHHHHHHCSSSSCEEEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSE
T ss_pred             HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCEECCCHHHHHCCCCE
T ss_conf             99999999637655653899984388540104789999998559764531476446530111351221117766337766


Q ss_pred             EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             10001133123334444555420235758899983799859955899876874476797699701686877569999999
Q gi|254780300|r  221 IMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAI  300 (316)
Q Consensus       221 v~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~~~s~v~~Qa~Nrl~~~~Al  300 (316)
                      ||+++|+.|+....  ....++...||||+++|+ ++++++||||||++||+||++||+|+|+|+||+||+||+|+||||
T Consensus       233 V~t~~~~~~~~~~~--~~~~~~~~~y~v~~~ll~-~~~dai~MHpLP~~Rg~EIs~eV~d~p~S~if~QaeNgl~~rmAl  309 (324)
T 1js1_X          233 IYAKNWAAYTGDNY--GQILSTDRNWTVGDRQMA-VTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVV  309 (324)
T ss_dssp             EEECCCCCCSTTCT--TCCCCCCTTSSBCHHHHT-TSSSCEEECCSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEECCCCHH--HHHHHHHCCCEECHHHHC-CCCCCEEECCCCCCCCCEECHHHHCCCCCHHHHHHHCCHHHHHHH
T ss_conf             89988886367307--779987418725499874-799999979999988866377675689872999986209999999


Q ss_pred             HHHHHCCCCC
Q ss_conf             9999778142
Q gi|254780300|r  301 IKELLENQNK  310 (316)
Q Consensus       301 L~~~l~~~~~  310 (316)
                      |+++|+|-..
T Consensus       310 L~~lL~n~~~  319 (324)
T 1js1_X          310 LKRLLENLPH  319 (324)
T ss_dssp             HHHHHHTSCS
T ss_pred             HHHHHHCCCC
T ss_conf             9999843986


No 19 
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.08  E-value=0.0015  Score=41.72  Aligned_cols=92  Identities=17%  Similarity=0.291  Sum_probs=65.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..||+++....|....+......++....++++.++.+|+|... ..-.     
T Consensus       161 ~L~gk~vgIiG---~G~IG~~va~~l~~fgm~V~~~d~~~~~~~~~~~~~~~~~~~l~ell~~sDvI~l~~Plt~-----  232 (351)
T 3jtm_A          161 DLEGKTIGTVG---AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTE-----  232 (351)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCT-----
T ss_pred             ECCCCEEEEEC---CCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCCHHHHHHHCCEEEEECCCCC-----
T ss_conf             11587666777---4652999999998638867844587776666775196004789999854999999367874-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             444455542023575889998379985995
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                             +.  ..-++.+.++.+|++++|-
T Consensus       233 -------~T--~~li~~~~~~~mk~~a~lI  253 (351)
T 3jtm_A          233 -------KT--RGMFNKELIGKLKKGVLIV  253 (351)
T ss_dssp             -------TT--TTCBSHHHHHHSCTTEEEE
T ss_pred             -------CC--CCCCCHHHHHHCCCCCEEE
T ss_conf             -------33--2563999997379997899


No 20 
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.43  E-value=0.005  Score=38.36  Aligned_cols=94  Identities=13%  Similarity=0.157  Sum_probs=64.3

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..||+++....|...-.............++++.+..+|+|+.. ..-.     
T Consensus       143 ~l~gk~vgIiG---~G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~D~v~~~~plt~-----  214 (320)
T 1gdh_A          143 KLDNKTLGIYG---FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTP-----  214 (320)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCT-----
T ss_pred             EECCCEEEEEE---ECHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCH-----
T ss_conf             62598899981---6669999999987428768886687775455531263323779999623998998689982-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             44445554202357588999837998599558
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                             +.  ..-++.+.++.+|++++|.-.
T Consensus       215 -------~T--~~li~~~~l~~mk~~a~liN~  237 (320)
T 1gdh_A          215 -------ET--RYFFNKATIKSLPQGAIVVNT  237 (320)
T ss_dssp             -------TT--TTCBSHHHHTTSCTTEEEEEC
T ss_pred             -------HH--HHEECHHHHHHCCCCEEEEEC
T ss_conf             -------66--421189999437753799975


No 21 
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepressor, transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.38  E-value=0.0066  Score=37.54  Aligned_cols=93  Identities=14%  Similarity=0.182  Sum_probs=64.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++.++|   .+++.......+..||+++....|..-. ......++....++++.++.+|+|...-=..      
T Consensus       165 ~L~gktvGIiG---~G~IG~~va~~l~~fG~~V~~~d~~~~~-~~~~~~~~~~~~~l~ell~~sDivslh~Plt------  234 (347)
T 1mx3_A          165 RIRGETLGIIG---LGRVGQAVALRAKAFGFNVLFYDPYLSD-GVERALGLQRVSTLQDLLFHSDCVTLHCGLN------  234 (347)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHTTTCEEEEECTTSCT-THHHHHTCEECSSHHHHHHHCSEEEECCCCC------
T ss_pred             EEECCCCCEEC---CCHHHHHHHHHHHHCCCEEEEECCCCCC-HHHHHCCCCCCCCHHHHHHHCCEEEEECCCC------
T ss_conf             23276602104---5816999999998769989985566550-2344307633576878675488899705542------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             444555420235758899983799859955
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                           .+.  ..-++.+.++.+|++++|-.
T Consensus       235 -----~~T--~~li~~~~l~~mk~gailIN  257 (347)
T 1mx3_A          235 -----EHN--HHLINDFTVKQMRQGAFLVN  257 (347)
T ss_dssp             -----TTC--TTSBSHHHHTTSCTTEEEEE
T ss_pred             -----CCC--CCCCCHHHHHHCCCCCEEEE
T ss_conf             -----122--46457999973789978998


No 22 
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.29  E-value=0.014  Score=35.35  Aligned_cols=96  Identities=16%  Similarity=0.195  Sum_probs=69.8

Q ss_pred             HCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC--CCCCCCCCCCHHHCCCCCCEEEEEEEC
Q ss_conf             012221000100103554433013344664201342055327753222112--123433005845603686221000113
Q gi|254780300|r  150 RHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI--SNMGVEVFHDMQKGLKNVDVIMILRMQ  227 (316)
Q Consensus       150 ~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~--~~~~~~~~~d~~ea~~~aDvv~~~~~~  227 (316)
                      +...+.+.|.+++++|   .+++.......+..+|++++++....-..+..  .+.....+.++.+.+.++|+|+... .
T Consensus       149 ~~~~~~l~~~~v~viG---~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~divi~~~-p  224 (300)
T 2rir_A          149 QHTDYTIHGSQVAVLG---LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTI-P  224 (300)
T ss_dssp             HTCSSCSTTSEEEEEC---CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECC-S
T ss_pred             HHCCCCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEC-C
T ss_conf             7279665788899988---87889999999998799899996988879999973993797233676632688899607-8


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCC
Q ss_conf             312333444455542023575889998379985995589
Q gi|254780300|r  228 QERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPG  266 (316)
Q Consensus       228 ~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcL  266 (316)
                                       .-.++++.++..++++++.-+-
T Consensus       225 -----------------~~~i~~~~l~~m~~g~viiD~a  246 (300)
T 2rir_A          225 -----------------SMILNQTVLSSMTPKTLILDLA  246 (300)
T ss_dssp             -----------------SCCBCHHHHTTSCTTCEEEECS
T ss_pred             -----------------CCEECHHHHHHCCCCCEEEEEC
T ss_conf             -----------------5101298996179996899957


No 23 
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.14  E-value=0.014  Score=35.41  Aligned_cols=93  Identities=12%  Similarity=0.190  Sum_probs=62.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..||+++....|.................++++.+..+|+|... ....+    
T Consensus       188 ~l~gk~vGIiG---~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~~~sl~ell~~sDvV~lh~PLt~~----  260 (393)
T 2nac_A          188 DLEAMHVGTVA---AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE----  260 (393)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT----
T ss_pred             CCCCCEEEEEC---CCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCEEECCHHHHHHHCCEEEEECCCCCC----
T ss_conf             11153799876---72015689998521585699971446735532102302314688876415635550578710----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             4444555420235758899983799859955
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                              .  ..-++.+.++.+|++++|-.
T Consensus       261 --------T--~~lin~~~l~~MK~ga~LIN  281 (393)
T 2nac_A          261 --------T--EHMINDETLKLFKRGAYIVN  281 (393)
T ss_dssp             --------T--TTCBSHHHHTTSCTTEEEEE
T ss_pred             --------C--CCEECHHHHHHCCCCCEEEE
T ss_conf             --------1--57077899974599978997


No 24 
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii OT3}
Probab=96.13  E-value=0.011  Score=36.14  Aligned_cols=92  Identities=23%  Similarity=0.357  Sum_probs=66.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..||++|..+.|... +......++ ...++++.++.+|+|... ..-.     
T Consensus       139 ~l~~~~vgIiG---~G~IG~~va~~l~~fg~~v~~~~~~~~-~~~~~~~~~-~~~~l~~ll~~sDiv~l~lplt~-----  208 (307)
T 1wwk_A          139 ELEGKTIGIIG---FGRIGYQVAKIANALGMNILLYDPYPN-EERAKEVNG-KFVDLETLLKESDVVTIHVPLVE-----  208 (307)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHTTC-EECCHHHHHHHCSEEEECCCCST-----
T ss_pred             ECCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEECCCCC-HHHHHHCCC-EECCHHHHHHHCCEEEECCCCCC-----
T ss_conf             04698999979---288899999999877998999879997-666764294-46789999975999999789983-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             44445554202357588999837998599558
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                             +.  ..-++.+.++..+++++|-..
T Consensus       209 -------~T--~~li~~~~l~~mk~~~~liN~  231 (307)
T 1wwk_A          209 -------ST--YHLINEERLKLMKKTAILINT  231 (307)
T ss_dssp             -------TT--TTCBCHHHHHHSCTTCEEEEC
T ss_pred             -------CC--CCCCCHHHHHHCCCCEEEEEC
T ss_conf             -------11--265699999737998099977


No 25 
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens}
Probab=95.98  E-value=0.021  Score=34.32  Aligned_cols=100  Identities=17%  Similarity=0.226  Sum_probs=67.1

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.+.....+..||+++....|..- +......++ ...++++.++.+|+|..- ..-.     
T Consensus       162 eL~gktvgIiG---~G~IG~~va~~l~~fg~~v~~yd~~~~-~~~~~~~~~-~~~~l~~ll~~sDivslh~plt~-----  231 (335)
T 2g76_A          162 ELNGKTLGILG---LGRIGREVATRMQSFGMKTIGYDPIIS-PEVSASFGV-QQLPLEEIWPLCDFITVHTPLLP-----  231 (335)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHTTTCEEEEECSSSC-HHHHHHTTC-EECCHHHHGGGCSEEEECCCCCT-----
T ss_pred             CCCCCEEEEEC---CCHHHHHHHHHHCCCCCEEECCCCCCC-HHHHHHHCC-CHHHHHHHHHHCCEEEECCCCCC-----
T ss_conf             35688899989---878999999985668987866788755-034555332-04348776531899997068853-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCH
Q ss_conf             4444555420235758899983799859955899876874476
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISS  276 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~  276 (316)
                             +.  ..-++.+.++.+|++++|--+-   ||.=|++
T Consensus       232 -------~T--~~li~~~~l~~mk~ga~lIN~a---RG~iVde  262 (335)
T 2g76_A          232 -------ST--TGLLNDNTFAQCKKGVRVVNCA---RGGIVDE  262 (335)
T ss_dssp             -------TT--TTSBCHHHHTTSCTTEEEEECS---CTTSBCH
T ss_pred             -------CC--CCHHHHHHHHHCCCCCEEEECC---CCCCCCH
T ss_conf             -------22--1032299998579998899716---8733467


No 26 
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.95  E-value=0.012  Score=35.95  Aligned_cols=93  Identities=17%  Similarity=0.257  Sum_probs=62.9

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++.++|   .+++.+.....+..||+++..+.|..-.+.  .........++++.++.+|+|...-=-.      
T Consensus       139 ~L~gktvgIiG---~G~IG~~va~~l~~fg~~v~~~~~~~~~~~--~~~~~~~~~~l~ell~~sDiv~~~~plt------  207 (313)
T 2ekl_A          139 ELAGKTIGIVG---FGRIGTKVGIIANAMGMKVLAYDILDIREK--AEKINAKAVSLEELLKNSDVISLHVTVS------  207 (313)
T ss_dssp             CCTTCEEEEES---CSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HHHTTCEECCHHHHHHHCSEEEECCCCC------
T ss_pred             CCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEECCCCCHHH--HCCCCCCCCCHHHHHHHCCEEEECCCCC------
T ss_conf             67999999989---798999999999866986897268775666--3025655588999986499998526333------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             4445554202357588999837998599558
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                           .+.  ..-++.+.++.++++++|--+
T Consensus       208 -----~~T--~~li~~~~l~~mk~~a~lIN~  231 (313)
T 2ekl_A          208 -----KDA--KPIIDYPQFELMKDNVIIVNT  231 (313)
T ss_dssp             -----TTS--CCSBCHHHHHHSCTTEEEEES
T ss_pred             -----CCC--CCCCCHHHHHCCCCCCCEEEC
T ss_conf             -----223--465375786321578714406


No 27 
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.89  E-value=0.012  Score=35.92  Aligned_cols=95  Identities=22%  Similarity=0.237  Sum_probs=68.7

Q ss_pred             HCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC--CCCCCCCCCCHHHCCCCCCEEEEEEEC
Q ss_conf             012221000100103554433013344664201342055327753222112--123433005845603686221000113
Q gi|254780300|r  150 RHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI--SNMGVEVFHDMQKGLKNVDVIMILRMQ  227 (316)
Q Consensus       150 ~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~--~~~~~~~~~d~~ea~~~aDvv~~~~~~  227 (316)
                      ......+.|.+++.+|   .+++.......+..+|++++++.-..-.....  .+..+..+.++.+.+.++|+|+...  
T Consensus       147 ~~~~~~l~g~~v~i~G---~G~~g~~~~~~~~~~g~~v~v~~r~~~~~~~~~~~g~~~~~~~~l~~~~~~aDvvi~~~--  221 (293)
T 3d4o_A          147 QHTDFTIHGANVAVLG---LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTI--  221 (293)
T ss_dssp             HHCSSCSTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECC--
T ss_pred             HHCCCCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCEEEECCHHHHHHCCCCEEEECC--
T ss_conf             7378354787899988---88899999999997699799995773008999851883485330677757699999899--


Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             31233344445554202357588999837998599558
Q gi|254780300|r  228 QERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       228 ~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                          +            ..-|+++.++..++++++...
T Consensus       222 ----p------------~~~i~~~~l~~~~~gaviiDv  243 (293)
T 3d4o_A          222 ----P------------ALVVTANVLAEMPSHTFVIDL  243 (293)
T ss_dssp             ----S------------SCCBCHHHHHHSCTTCEEEEC
T ss_pred             ----C------------CCCCCHHHHHHCCCCCEEEEE
T ss_conf             ----9------------875889999728999799994


No 28 
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=95.88  E-value=0.016  Score=35.01  Aligned_cols=96  Identities=18%  Similarity=0.222  Sum_probs=65.0

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHH
Q ss_conf             100010010355443301334466420134205532775322211-2123433005845603686221000113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-ISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~  233 (316)
                      .+.|.++..+|   .+++....+..+..||+++....|....+.. ....++....++++.++.+|+|....=..     
T Consensus       161 ~l~gk~~giiG---~G~IG~~va~~l~~fg~~v~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~sDiV~l~~Plt-----  232 (364)
T 2j6i_A          161 DIEGKTIATIG---AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLH-----  232 (364)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCS-----
T ss_pred             CCCCCEEEEEE---EEHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHCCEEEECCCCC-----
T ss_conf             45498899995---3389999999975303634763145555400465328512568999985398988636774-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCC
Q ss_conf             444455542023575889998379985995589
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPG  266 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcL  266 (316)
                            .+..  .-++.+.++.+|++++|-.+-
T Consensus       233 ------~~T~--~li~~~~f~~mK~ga~lIN~a  257 (364)
T 2j6i_A          233 ------AGTK--GLINKELLSKFKKGAWLVNTA  257 (364)
T ss_dssp             ------TTTT--TCBCHHHHTTSCTTEEEEECS
T ss_pred             ------CCCC--CCCCHHHHHHCCCCCEEEEEC
T ss_conf             ------3440--300099997279998799606


No 29 
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, structural genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.82  E-value=0.016  Score=35.08  Aligned_cols=91  Identities=18%  Similarity=0.276  Sum_probs=64.5

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.+.....+..||++|....|..- +......++ ...++++.++.+|+|... ..-.     
T Consensus       147 ~L~g~~vgiiG---~G~IG~~va~~l~~fg~~v~~~~~~~~-~~~~~~~~~-~~~~l~ell~~sDii~~~~plt~-----  216 (334)
T 2dbq_A          147 DVYGKTIGIIG---LGRIGQAIAKRAKGFNMRILYYSRTRK-EEVERELNA-EFKPLEDLLRESDFVVLAVPLTR-----  216 (334)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHCC-EECCHHHHHHHCSEEEECCCCCT-----
T ss_pred             CCCCCEEEEEE---ECHHHHHHHHHHHCCCCEEEEECCCCC-HHHHHHCCC-EECCHHHHHHHCCEEEECCCCCC-----
T ss_conf             05799899981---788999999997607878997368873-334765294-45789999866999999289973-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             4444555420235758899983799859955
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                             +.  ..-++.+.++.+|++++|--
T Consensus       217 -------~T--~~li~~~~~~~mk~ga~lIN  238 (334)
T 2dbq_A          217 -------ET--YHLINEERLKLMKKTAILIN  238 (334)
T ss_dssp             -------TT--TTCBCHHHHHHSCTTCEEEE
T ss_pred             -------CC--CCCCCHHHHHHCCCCEEEEE
T ss_conf             -------01--25659999972189819999


No 30 
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosphate ION, oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=95.66  E-value=0.016  Score=35.01  Aligned_cols=129  Identities=17%  Similarity=0.239  Sum_probs=79.3

Q ss_pred             CCCCCCCCCCCCHH--HHHHHHHHHHCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
Q ss_conf             11112345663122--33222222201222-1000100103554433013344664201342055327753222112123
Q gi|254780300|r  127 SIINAGDGTHEHPS--QALLDAFAIRHFKG-KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNM  203 (316)
Q Consensus       127 pVINag~~~~~HP~--Q~LaDl~Ti~e~~g-~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~  203 (316)
                      +|.|+- |.+..+.  .+++=++.+.+..| .+.|.++.++|   .+++..-....+..+|+++..+.|......     
T Consensus        83 ~v~n~p-g~na~aVAE~vl~~~l~~~r~~~~~l~~~tvGIvG---~G~IG~~va~~l~~~g~~v~~~d~~~~~~~-----  153 (380)
T 2o4c_A           83 AWSSAP-GCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVG---AGQVGGRLVEVLRGLGWKVLVCDPPRQARE-----  153 (380)
T ss_dssp             EEECCT-TTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECHHHHHHS-----
T ss_pred             EEEECC-CCCCHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEC---CCCCHHHHHHHHHHCCCCCCCCCCCCCCCC-----
T ss_conf             799579-86808999999983335666523053077883879---881399999999864962102477422234-----


Q ss_pred             CCCCCCCHHHCCCCCCEEEE-EEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHH
Q ss_conf             43300584560368622100-011331233344445554202357588999837998599558998768744767
Q gi|254780300|r  204 GVEVFHDMQKGLKNVDVIMI-LRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSS  277 (316)
Q Consensus       204 ~~~~~~d~~ea~~~aDvv~~-~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~  277 (316)
                      ......++++.+..+|+|.. ...-...          .+....-++.+.++.++++++|..+.   ||.-|+++
T Consensus       154 ~~~~~~~l~e~l~~~Divslh~plt~~~----------~~~T~~lin~~~l~~mk~ga~lIN~s---RG~vVde~  215 (380)
T 2o4c_A          154 PDGEFVSLERLLAEADVISLHTPLNRDG----------EHPTRHLLDEPRLAALRPGTWLVNAS---RGAVVDNQ  215 (380)
T ss_dssp             TTSCCCCHHHHHHHCSEEEECCCCCSSS----------SSCCTTSBCHHHHHTSCTTEEEEECS---CGGGBCHH
T ss_pred             CCCCCCCHHHHHHCCCEEEEECCCCCCC----------CHHHHHHHHHHHHHHCCCCCEEEEEC---CCCCCCHH
T ss_conf             4232256888640078899956688765----------40157675099997379996899805---77666999


No 31 
>3kbo_A Glyoxylate/hydroxypyruvate reductase A; NADP, cytoplasm, NAD, structural genomics; HET: NDP NDB EPE; 2.14A {Salmonella enterica subsp}
Probab=95.60  E-value=0.036  Score=32.77  Aligned_cols=92  Identities=12%  Similarity=0.072  Sum_probs=61.1

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHH
Q ss_conf             21000100103554433013344664201342055327753222112123433005845603686221000-11331233
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIP  232 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~  232 (316)
                      ..+.|.++.++|   .+++.+.....+..||+++..+.|.........  ......++++.+..+|+|... ..-.    
T Consensus       135 ~~l~g~tvgIvG---~G~IG~~va~~l~~fG~~v~~~~~~~~~~~~~~--~~~~~~~l~~ll~~sD~v~~~~Plt~----  205 (315)
T 3kbo_A          135 YTREEFSVGIMG---AGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE--SYVGREELRAFLNQTRVLINLLPNTA----  205 (315)
T ss_dssp             CCGGGCCEEEES---CSHHHHHHHHHHHTTTCCEEEEESSCCCCTTEE--EEESGGGHHHHHHTCSEEEECCCCCT----
T ss_pred             CCCCCCEEEEEC---CCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--CEEEECCCEEECCCCCEEECCCCCCC----
T ss_conf             354675789976---183899999999874992552023443232312--12331010000320337840478853----


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             34444555420235758899983799859955
Q gi|254780300|r  233 RSLIPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                              +..  --++.+.++.++++++|--
T Consensus       206 --------~T~--~li~~~~l~~mk~~a~lIN  227 (315)
T 3kbo_A          206 --------QTV--GIINSELLDQLPDGAYVLN  227 (315)
T ss_dssp             --------TTT--TCBSHHHHTTSCTTEEEEE
T ss_pred             --------CCC--CHHHHHHHHHHCCCCEEEE
T ss_conf             --------333--6232999986145425885


No 32 
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.58  E-value=0.054  Score=31.65  Aligned_cols=87  Identities=13%  Similarity=0.171  Sum_probs=59.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++..+|   .+++.......+..||+++..+.|....      .......++++.++++|+|... ..-.     
T Consensus       121 ~l~gk~vgIiG---~G~IG~~va~~l~~fg~~V~~~d~~~~~------~~~~~~~~l~~ll~~sDvv~~~~Plt~-----  186 (303)
T 1qp8_A          121 LIQGEKVAVLG---LGEIGTRVGKILAALGAQVRGFSRTPKE------GPWRFTNSLEEALREARAAVCALPLNK-----  186 (303)
T ss_dssp             CCTTCEEEEES---CSTHHHHHHHHHHHTTCEEEEECSSCCC------SSSCCBSCSHHHHTTCSEEEECCCCST-----
T ss_pred             CCCCCEEEEEE---ECHHHHHHHHHHHHCCCEEEEECCCCCC------CCCCCCCCHHHHHHCCCEEEECCCCCH-----
T ss_conf             35899999990---3899999999887359779974488422------333233879999725799986167970-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             4444555420235758899983799859955
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                             +.  ..-++.+.++.+|++++|--
T Consensus       187 -------~T--~~li~~~~l~~mk~ga~lIN  208 (303)
T 1qp8_A          187 -------HT--RGLVKYQHLALMAEDAVFVN  208 (303)
T ss_dssp             -------TT--TTCBCHHHHTTSCTTCEEEE
T ss_pred             -------HC--CCCCCHHHHHHHCCCEEEEE
T ss_conf             -------00--57458889751015507999


No 33 
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=95.46  E-value=0.02  Score=34.39  Aligned_cols=128  Identities=18%  Similarity=0.272  Sum_probs=79.3

Q ss_pred             CCCCCCCCCCCCCCHHHHHHH-----HHHHHCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf             421111234566312233222-----222201222-10001001035544330133446642013420553277532221
Q gi|254780300|r  125 GPSIINAGDGTHEHPSQALLD-----AFAIRHFKG-KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPK  198 (316)
Q Consensus       125 ~ppVINag~~~~~HP~Q~LaD-----l~Ti~e~~g-~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~  198 (316)
                      .++|.|+- |.+   .++.|+     ++......| .+.|.++.++|   .+++.......+..||+++..+.|..-.. 
T Consensus        84 gI~v~n~~-g~~---a~aVAe~~l~~~l~~~~~~~~~~~~ktvGIiG---~G~IG~~va~~l~~~g~~V~~~d~~~~~~-  155 (381)
T 3oet_A           84 GIGFSAAP-GCN---AIAVVEYVFSALLMLAERDGFSLRDRTIGIVG---VGNVGSRLQTRLEALGIRTLLCDPPRAAR-  155 (381)
T ss_dssp             TCEEECCT-TTT---HHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECHHHHHT-
T ss_pred             EEEEEECC-CCC---HHHHHHHHHHHHHHHHHHCCHHHHCCEEEECC---CCCHHHHHHHHHHCCCCEEEEECCCCCCC-
T ss_conf             43899567-646---89999999998789987413554186884437---67578999998754785799986632334-


Q ss_pred             CCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHH
Q ss_conf             12123433005845603686221000-11331233344445554202357588999837998599558998768744767
Q gi|254780300|r  199 DISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSS  277 (316)
Q Consensus       199 ~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~  277 (316)
                          .......++++.++.+|+|..- ..-.+.          ++....-++.+.++.+|+++++..+.   ||.-|+++
T Consensus       156 ----~~~~~~~~l~~ll~~sDiislh~plt~~~----------~~~T~~li~~~~l~~mk~~a~lIN~s---RG~vVde~  218 (381)
T 3oet_A          156 ----GDEGDFRTLDELVQEADVLTFHTPLYKDG----------PYKTLHLADETLIRRLKPGAILINAC---RGPVVDNA  218 (381)
T ss_dssp             ----TCCSCBCCHHHHHHHCSEEEECCCCCCSS----------TTCCTTSBCHHHHHHSCTTEEEEECS---CGGGBCHH
T ss_pred             ----CCCCCCCCHHHHHHHCCCEEEECCCCCCC----------CCCCCCHHHHHHHHHCCCCCEEEEEC---CCCCCCHH
T ss_conf             ----43344577999997478314532677655----------44341347788886308995799806---73410899


No 34 
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.36  E-value=0.04  Score=32.49  Aligned_cols=93  Identities=10%  Similarity=0.175  Sum_probs=62.7

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++.++|   .+++.+.....+..||++|..+.|......... ..+ ...++++.++.+|+|+.. ....     
T Consensus       134 ~l~gktvgIiG---~G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~-~~~-~~~~l~e~l~~sDiv~~~-lPlt-----  202 (324)
T 3evt_A          134 TLTGQQLLIYG---TGQIGQSLAAKASALGMHVIGVNTTGHPADHFH-ETV-AFTATADALATANFIVNA-LPLT-----  202 (324)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS-EEE-EGGGCHHHHHHCSEEEEC-CCCC-----
T ss_pred             CEECCEEEEEE---ECHHHHHHHHHHHCCCCEEECCCCCCCCCCCHH-HCE-EEEEHHHHCCCCEEEEEC-CCCC-----
T ss_conf             30078899990---552569998876227855642588632110022-031-243113321431025632-5797-----


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             4445554202357588999837998599558
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                           .+..  .-++.+.++.++++++|.-.
T Consensus       203 -----~~T~--~li~~~~~~~mk~~a~lIN~  226 (324)
T 3evt_A          203 -----PTTH--HLFSTELFQQTKQQPMLINI  226 (324)
T ss_dssp             -----GGGT--TCBSHHHHHTCCSCCEEEEC
T ss_pred             -----CCCC--CCCHHHHHHHHCCCCCEEEE
T ss_conf             -----0035--86379997532135414541


No 35 
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=95.34  E-value=0.04  Score=32.45  Aligned_cols=92  Identities=12%  Similarity=0.248  Sum_probs=64.4

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..||+++....|... +.. ...++ ...++++.++.+|+|... ..-      
T Consensus       143 ~l~gk~vgIiG---~G~IG~~va~~l~~fg~~V~~~d~~~~-~~~-~~~~~-~~~~l~~ll~~aDiv~~~lPlt------  210 (333)
T 1j4a_A          143 EVRDQVVGVVG---TGHIGQVFMQIMEGFGAKVITYDIFRN-PEL-EKKGY-YVDSLDDLYKQADVISLHVPDV------  210 (333)
T ss_dssp             CGGGSEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCC-HHH-HHTTC-BCSCHHHHHHHCSEEEECSCCC------
T ss_pred             EECCCEEEEEE---CCCCCHHHHHHHCCCCCCEEEECCCCC-CCH-HCCCC-CCCCHHHHHHHCCEEEEECCCC------
T ss_conf             40288899992---465147488763366770110078777-102-10560-0387999986499899916898------


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCC
Q ss_conf             444455542023575889998379985995589
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPG  266 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcL  266 (316)
                            .+..  .-++.+.++.+|++++|--.-
T Consensus       211 ------~~T~--~li~~~~~~~mk~~a~lIN~a  235 (333)
T 1j4a_A          211 ------PANV--HMINDESIAKMKQDVVIVNVS  235 (333)
T ss_dssp             ------GGGT--TCBSHHHHHHSCTTEEEEECS
T ss_pred             ------CCHH--CEECHHHHHHCCCCCEEEECC
T ss_conf             ------5112--010599995258998899854


No 36 
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=95.19  E-value=0.042  Score=32.34  Aligned_cols=95  Identities=8%  Similarity=0.059  Sum_probs=62.7

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHC-CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHH
Q ss_conf             1000100103554433013344664201-342055327753222112123433005845603686221000113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNT-MGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~-~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+.. +|+++....+....+......+.....++++.++.+|+|...-=..     
T Consensus       160 ~l~g~tvGIiG---~G~IG~~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~sDiv~l~~plt-----  231 (348)
T 2w2k_A          160 NPRGHVLGAVG---LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYM-----  231 (348)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCS-----
T ss_pred             CCCCCEEEEEC---CCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEECCHHHHHHHCCEEEEECCCC-----
T ss_conf             45466899978---6663167677677426607999647410001243037455267999963177555506785-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             44445554202357588999837998599558
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                            .+.  ..-|+.+.++.++++++|--+
T Consensus       232 ------~~T--~~li~~~~l~~mk~ga~lIN~  255 (348)
T 2w2k_A          232 ------KLT--HHLIDEAFFAAMKPGSRIVNT  255 (348)
T ss_dssp             ------GGG--TTCBCHHHHHHSCTTEEEEEC
T ss_pred             ------CCH--HHHHHHHHHHHHCCCCEEEEE
T ss_conf             ------220--557777686540368568971


No 37 
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydrolase, cytoplasm, NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei 1710B} PDB: 3glq_A*
Probab=95.06  E-value=0.067  Score=31.02  Aligned_cols=100  Identities=18%  Similarity=0.245  Sum_probs=73.7

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHH
Q ss_conf             10001001035544330133446642013420553277532--2211212343300584560368622100011331233
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIP  232 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~  232 (316)
                      -+.|.+++.+|   ++.+-+.....+..+|+.|+++.-+..  +.....  |+++ ..+++++..+|++++..-..    
T Consensus       274 ~laGK~vvV~G---YG~~GrGvA~~~rg~Ga~V~V~EiDPi~ALeA~md--Gf~V-~~~~eaa~~aDi~VTaTG~~----  343 (494)
T 3d64_A          274 MIAGKIAVVAG---YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAME--GYRV-VTMEYAADKADIFVTATGNY----  343 (494)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTT--TCEE-CCHHHHTTTCSEEEECSSSS----
T ss_pred             EECCCEEEEEC---CCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHC--CCEE-EHHHHHHCCCCEEEECCCCC----
T ss_conf             11685799952---54111768998863698699996790678998865--9874-22654221088999906986----


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHH
Q ss_conf             34444555420235758899983799859955899876874476797
Q gi|254780300|r  233 RSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVA  279 (316)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~  279 (316)
                                   --|+.+.|+.+|++||+.-..-  ...||+-+..
T Consensus       344 -------------~vi~~eh~~~MKdGaIlaN~GH--fd~EId~~~l  375 (494)
T 3d64_A          344 -------------HVINHDHMKAMRHNAIVCNIGH--FDSEIDVAST  375 (494)
T ss_dssp             -------------CSBCHHHHHHCCTTEEEEECSS--SSCSBCCGGG
T ss_pred             -------------CCCCHHHHHHHCCCCEEECCCC--CHHHEEHHHH
T ss_conf             -------------6355999998538979966667--4153015555


No 38 
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus HB8}
Probab=95.03  E-value=0.073  Score=30.78  Aligned_cols=86  Identities=20%  Similarity=0.300  Sum_probs=58.4

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE-EEECCHHHHH
Q ss_conf             100010010355443301334466420134205532775322211212343300584560368622100-0113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMI-LRMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~-~~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.+.....+..||+++....|..- +.     . ....++++.+.++|+|.. ...-.+    
T Consensus       141 ~l~gk~vgIiG---~G~IG~~~a~~l~~fg~~v~~~~~~~~-~~-----~-~~~~~l~ell~~sDiv~~~~plt~~----  206 (311)
T 2cuk_A          141 DLQGLTLGLVG---MGRIGQAVAKRALAFGMRVVYHARTPK-PL-----P-YPFLSLEELLKEADVVSLHTPLTPE----  206 (311)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCC-SS-----S-SCBCCHHHHHHHCSEEEECCCCCTT----
T ss_pred             CCCCCEEEEEE---ECHHHHHHHHHHHHCCCEEEEECCCCC-CC-----C-CCCCCHHHHHHHCCEEEECCCCCHH----
T ss_conf             24699899980---788999999999858998999889844-46-----8-7667999999769999993889847----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             4444555420235758899983799859955
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                              .  ..-++.+.++.+|++++|.-
T Consensus       207 --------t--~~li~~~~l~~mk~~a~liN  227 (311)
T 2cuk_A          207 --------T--HRLLNRERLFAMKRGAILLN  227 (311)
T ss_dssp             --------T--TTCBCHHHHTTSCTTCEEEE
T ss_pred             --------H--CCCCCHHHHHHCCCCEEEEE
T ss_conf             --------6--27748999974199849997


No 39 
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.94  E-value=0.2  Score=27.93  Aligned_cols=191  Identities=18%  Similarity=0.171  Sum_probs=104.3

Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHH-HHHHHHHCCCCC--CCCCC
Q ss_conf             777417822389999999999999999644204877521289769999607873378999-979876135211--12333
Q gi|254780300|r    5 PLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSF-EVAGKLLGVHVI--NINTK   81 (316)
Q Consensus         5 ~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SF-e~A~~~LGg~~i--~l~~~   81 (316)
                      .|+ +|+-+.+..+=.+.|-+.-..+++   + +..    ++-.+.++=..|+.++.+.. ..++.++|..+.  .|+.+
T Consensus         3 ~M~-iLdGk~iA~~i~~~lk~~v~~l~~---~-g~~----P~LaiIlvgdd~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~   73 (285)
T 3p2o_A            3 AMT-LLDGKALSAKIKEELKEKNQFLKS---K-GIE----SCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNEN   73 (285)
T ss_dssp             CCE-ECCHHHHHHHHHHHHHHHHHHHHT---T-TCC----CEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTT
T ss_pred             CCE-EEECHHHHHHHHHHHHHHHHHHHH---C-CCC----CCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             889-810499999999999999999984---7-999----8379999699877899999999998436743899841566


Q ss_pred             CCCCCCCCCCCCHHHHHHHHC-CCCEEEECCCCCHHH--HHHCCC---CC---CCCCCC-----CCCCCCCHHHHHHHHH
Q ss_conf             321013334224799987413-671465203210055--420012---34---211112-----3456631223322222
Q gi|254780300|r   82 NSAMKKGENIADTIATLNALR-PNIIVIRHPYSGAVN--SLMHKI---KG---PSIINA-----GDGTHEHPSQALLDAF  147 (316)
Q Consensus        82 ~s~~~kgEs~~Dta~vls~~~-~d~iv~R~~~~~~~~--~~a~~~---s~---ppVINa-----g~~~~~HP~Q~LaDl~  147 (316)
                      .++    |.+.+.+..++.-- ++.|++-.|..+.+.  ......   ..   ..-.|.     +....-.||-++|=+-
T Consensus        74 ~t~----~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~PcTp~av~~  149 (285)
T 3p2o_A           74 ITQ----NELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMK  149 (285)
T ss_dssp             CCH----HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHH
T ss_pred             CCH----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf             778----9999999987335762179985589854254889862887436563575555456517988877987799999


Q ss_pred             HHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             22012221000100103554433013344664201342055327753222112123433005845603686221000
Q gi|254780300|r  148 AIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       148 Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      -+.+..-+++|.+++.+|.  ..-|.+-+..++..-|+.+++|...              +.++.+..+.||+++..
T Consensus       150 lL~~~~i~l~Gk~vvVvGr--S~iVG~Pla~lL~~~~atVt~~h~~--------------t~~l~~~~~~ADivi~a  210 (285)
T 3p2o_A          150 LLKAYEIDLEGKDAVIIGA--SNIVGRPMATMLLNAGATVSVCHIK--------------TKDLSLYTRQADLIIVA  210 (285)
T ss_dssp             HHHHTTCCCTTCEEEEECC--CTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHTTCSEEEEC
T ss_pred             HHHHHCCCCCCCEEEEECC--CCCCHHHHHHHHHHCCCCEEEECCC--------------CHHHHHHHHHCHHHHHH
T ss_conf             9999699988988999878--7533499999986463737752366--------------53477776411032231


No 40 
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding domain, 37 amino acid insertional region; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis H37RV} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.86  E-value=0.077  Score=30.63  Aligned_cols=100  Identities=19%  Similarity=0.276  Sum_probs=71.9

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHH
Q ss_conf             10001001035544330133446642013420553277532--2211212343300584560368622100011331233
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIP  232 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~  232 (316)
                      -+.|.+++.+|   ++.+-+.....+..+|++|+++.-+..  +.....  |+++ ..++++++.+|++++..-..    
T Consensus       271 ~laGk~vvV~G---YG~vGkGvA~~~rg~Ga~V~V~EvDPi~ALeA~md--Gf~V-~~~~ea~~~~DifVTaTG~~----  340 (494)
T 3ce6_A          271 LIGGKKVLICG---YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMME--GFDV-VTVEEAIGDADIVVTATGNK----  340 (494)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TCEE-CCHHHHGGGCSEEEECSSSS----
T ss_pred             HHCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHC--CCCC-CCHHHHHCCCCEEEEECCCC----
T ss_conf             61672699965---43040589999852899899983581887787753--8841-33999860099999916998----


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHH
Q ss_conf             34444555420235758899983799859955899876874476797
Q gi|254780300|r  233 RSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVA  279 (316)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~  279 (316)
                                   --|+.+.|+.+|++||+.-..-  ...||+-+.+
T Consensus       341 -------------~vi~~eh~~~MKdgaIlaN~GH--fd~EId~~~L  372 (494)
T 3ce6_A          341 -------------DIIMLEHIKAMKDHAILGNIGH--FDNEIDMAGL  372 (494)
T ss_dssp             -------------CSBCHHHHHHSCTTCEEEECSS--SGGGBCHHHH
T ss_pred             -------------CCCCHHHHHHHCCCCEEECCCC--CCCEEEHHHH
T ss_conf             -------------8767999983237978963466--6412338888


No 41 
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosynthesis, structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.78  E-value=0.051  Score=31.77  Aligned_cols=93  Identities=17%  Similarity=0.300  Sum_probs=64.5

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.+.....+..||+++....|..- +......+++ ..++++.+..+|+|... ..-      
T Consensus       139 ~L~gktvGIiG---~G~IG~~va~~~~~fgm~v~~~d~~~~-~~~~~~~~~~-~~~l~ell~~sD~v~lh~Plt------  207 (529)
T 1ygy_A          139 EIFGKTVGVVG---LGRIGQLVAQRIAAFGAYVVAYDPYVS-PARAAQLGIE-LLSLDDLLARADFISVHLPKT------  207 (529)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHTTTCEEEEECTTSC-HHHHHHHTCE-ECCHHHHHHHCSEEEECCCCS------
T ss_pred             CCCCCEEEEEC---CCCHHHHHHHHHHCCCCEEEEECCCCC-CCHHHHCCCC-CCCHHHHHHHCCEEEEECCCC------
T ss_conf             13687899976---472689999997467977999448744-3302223722-167999984499999907998------


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCC
Q ss_conf             444455542023575889998379985995589
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPG  266 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcL  266 (316)
                            .+.  ..-++.+.++++|++++|..|-
T Consensus       208 ------~~T--~~li~~~~~~~mK~ga~lIN~a  232 (529)
T 1ygy_A          208 ------PET--AGLIDKEALAKTKPGVIIVNAA  232 (529)
T ss_dssp             ------TTT--TTCBCHHHHTTSCTTEEEEECS
T ss_pred             ------CCC--CCCCCHHHHHHCCCCCEEEECC
T ss_conf             ------533--1510799995258998687414


No 42 
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=94.70  E-value=0.14  Score=29.00  Aligned_cols=90  Identities=10%  Similarity=0.108  Sum_probs=61.6

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++.++|   .+++.......+..+|+++....|.....     .....+.++++.+..+|+|...-=..      
T Consensus       161 ~l~gk~vgIiG---~G~IG~~va~~~~~fg~~v~~~~~~~~~~-----~~~~~~~~l~ell~~sDvi~l~~Plt------  226 (333)
T 3ba1_A          161 KFSGKRVGIIG---LGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLT------  226 (333)
T ss_dssp             CCTTCCEEEEC---CSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCC------
T ss_pred             EECCCEEEEEC---CCHHHHHHHHHHHCCCCEEEEECCCCCHH-----HCCCCCCCHHHHHCCCCEEEEECCCC------
T ss_conf             23599999988---18899999998743697798640456622-----21343430333203399999918997------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             4445554202357588999837998599558
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                           .+.  ..-++.+.++.+|++++|-.+
T Consensus       227 -----~~T--~~li~~~~l~~mk~~a~lIN~  250 (333)
T 3ba1_A          227 -----PET--THIINREVIDALGPKGVLINI  250 (333)
T ss_dssp             -----GGG--TTCBCHHHHHHHCTTCEEEEC
T ss_pred             -----CCH--HHHCCHHHHHHHCCCCEEEEE
T ss_conf             -----303--333169999862553448983


No 43 
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.64  E-value=0.11  Score=29.52  Aligned_cols=99  Identities=14%  Similarity=0.173  Sum_probs=67.7

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++..+|   .+++.......+..||+++....|..-.+.    .......++++.+..+|+|..--=.       
T Consensus       142 el~gktlgIiG---~G~IG~~va~~~~~~gm~V~~~d~~~~~~~----~~~~~~~~l~ell~~sDiVslh~Pl-------  207 (404)
T 1sc6_A          142 EARGKKLGIIG---YGHIGTQLGILAESLGMYVYFYDIENKLPL----GNATQVQHLSDLLNMSDVVSLHVPE-------  207 (404)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCCCCC----TTCEECSCHHHHHHHCSEEEECCCS-------
T ss_pred             CCCCEEEEEEC---CCCCCHHHHHHCCCCCCEEEECCCCCCCCC----CCCEECCHHHHHHHHCCEEEECCCC-------
T ss_conf             44303689950---333103333100345736863244465311----3531103055545228799972788-------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCH
Q ss_conf             444555420235758899983799859955899876874476
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISS  276 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~  276 (316)
                          ..+.+  .-++.+.++++|++++|..+-   ||.=|++
T Consensus       208 ----t~~T~--~lin~~~l~~mK~gailIN~a---RG~iVde  240 (404)
T 1sc6_A          208 ----NPSTK--NMMGAKEISLMKPGSLLINAS---RGTVVDI  240 (404)
T ss_dssp             ----STTTT--TCBCHHHHHHSCTTEEEEECS---CSSSBCH
T ss_pred             ----CCCCC--CHHHHHHHHHCCCCCEEEECC---CCCEECH
T ss_conf             ----85663--515899997469986999437---7765658


No 44 
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase family protein; structural genomics, protein structure initiative; 1.80A {Aeromonas salmonicida subsp}
Probab=94.59  E-value=0.042  Score=32.34  Aligned_cols=63  Identities=14%  Similarity=0.149  Sum_probs=48.5

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEE
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIM  222 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~  222 (316)
                      .+.|.++.++|   .+++.......+..||+++..+.|....+....  ......++++.+..+|+|.
T Consensus       137 ~l~gktvgIiG---~G~IG~~va~~l~~fg~~v~~~~~~~~~~~~~~--~~~~~~~l~~ll~~sD~v~  199 (324)
T 3hg7_A          137 GLKGRTLLILG---TGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD--QVYQLPALNKMLAQADVIV  199 (324)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS--EEECGGGHHHHHHTCSEEE
T ss_pred             CCCCCEEEEEE---EEECCCHHHHCCCCCCCEEECCCCCCCCCHHHH--CCCCCCCHHCCCCCCCCCE
T ss_conf             76588889996---650550231024676755640323433210110--1321000100444566431


No 45 
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=94.56  E-value=0.083  Score=30.41  Aligned_cols=99  Identities=17%  Similarity=0.332  Sum_probs=65.6

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..+|+.+....|..-.  .....++ ...++++.++.+|+|+.. ..-.     
T Consensus       138 ~l~g~~vgIiG---~G~IG~~~a~~l~~~g~~v~~~~~~~~~--~~~~~~~-~~~~l~ell~~sDiv~~~lPlt~-----  206 (334)
T 2pi1_A          138 ELNRLTLGVIG---TGRIGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGC-VYTSLDELLKESDVISLHVPYTK-----  206 (334)
T ss_dssp             CGGGSEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTC-EECCHHHHHHHCSEEEECCCCCT-----
T ss_pred             EECCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEECCCCCH--HHHHCCC-EECCHHHHHHHCCEEEECCCCCH-----
T ss_conf             10586899986---8989999999877458579998786511--2453382-54489999854897898478982-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCH
Q ss_conf             4444555420235758899983799859955899876874476
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISS  276 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~  276 (316)
                             +.  ..-++.+.++.+|++++|--..   ||.=|++
T Consensus       207 -------~T--~~li~~~~~~~mk~~a~lIN~a---RG~iVde  237 (334)
T 2pi1_A          207 -------ET--HHMINEERISLMKDGVYLINTA---RGKVVDT  237 (334)
T ss_dssp             -------TT--TTCBCHHHHHHSCTTEEEEECS---CGGGBCH
T ss_pred             -------HH--CCCCCHHHHHHCCCCCEEEECC---CCCEECH
T ss_conf             -------54--0676999997369997898557---7750289


No 46 
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum 3D7} SCOP: c.2.1.4 c.23.12.3
Probab=94.50  E-value=0.087  Score=30.29  Aligned_cols=99  Identities=19%  Similarity=0.234  Sum_probs=72.5

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHH
Q ss_conf             10001001035544330133446642013420553277532--2211212343300584560368622100011331233
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIP  232 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~  232 (316)
                      -+.|.+++.+|   ++.+-+.....+.-+|++|.++.-+..  +.....  |+++ ..++++++.+|+++|..-..    
T Consensus       254 llaGK~vVV~G---YG~~GkG~A~~~rg~GA~V~VtEvDPi~ALeA~md--Gf~V-~~~~ea~~~~DifvTaTG~~----  323 (479)
T 1v8b_A          254 LISGKIVVICG---YGDVGKGCASSMKGLGARVYITEIDPICAIQAVME--GFNV-VTLDEIVDKGDFFITCTGNV----  323 (479)
T ss_dssp             CCTTSEEEEEC---CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTT--TCEE-CCHHHHTTTCSEEEECCSSS----
T ss_pred             EECCCEEEEEE---CCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHC--CCEE-EEHHHHHCCCCEEEECCCCC----
T ss_conf             55685799984---04110426877604898899996795478998853--8763-12678531386999917998----


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHH
Q ss_conf             3444455542023575889998379985995589987687447679
Q gi|254780300|r  233 RSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSV  278 (316)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v  278 (316)
                                   --|+.+.|+.+|++||+....-  -..||+-.-
T Consensus       324 -------------~vI~~eh~~~MKdgAIl~N~GH--fd~EId~~~  354 (479)
T 1v8b_A          324 -------------DVIKLEHLLKMKNNAVVGNIGH--FDDEIQVNE  354 (479)
T ss_dssp             -------------SSBCHHHHTTCCTTCEEEECSS--TTTSBCHHH
T ss_pred             -------------CCCCHHHHHHHCCCEEEECCCC--CCCEECHHH
T ss_conf             -------------6236999984138819973577--641011898


No 47 
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=94.20  E-value=0.11  Score=29.60  Aligned_cols=100  Identities=18%  Similarity=0.287  Sum_probs=72.4

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHH
Q ss_conf             10001001035544330133446642013420553277532--2211212343300584560368622100011331233
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIP  232 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~  232 (316)
                      -+.|.+++.+|   ++.+-+.....+..+|+.|+++.-+..  +.....  |+++ ..++++++.+|++++..-..    
T Consensus       244 l~aGK~vvV~G---YG~~GkG~A~~~rg~Ga~V~V~EvDPi~AleA~md--Gf~V-~~~~~a~~~~DifvTaTG~~----  313 (464)
T 3n58_A          244 MMAGKVAVVCG---YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMD--GFEV-VTLDDAASTADIVVTTTGNK----  313 (464)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT--TCEE-CCHHHHGGGCSEEEECCSSS----
T ss_pred             EECCCEEEEEE---CCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHC--CCCC-CCHHHHHHCCCEEEECCCCC----
T ss_conf             55685699983---36121889999840899899991692689999846--9841-12889520088999837988----


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHH
Q ss_conf             34444555420235758899983799859955899876874476797
Q gi|254780300|r  233 RSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVA  279 (316)
Q Consensus       233 ~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~  279 (316)
                                   --|+.+.|..+|++||+.-..-  ...||+-+.+
T Consensus       314 -------------~vi~~~h~~~MKdgailaN~GH--fd~EId~~~L  345 (464)
T 3n58_A          314 -------------DVITIDHMRKMKDMCIVGNIGH--FDNEIQVAAL  345 (464)
T ss_dssp             -------------SSBCHHHHHHSCTTEEEEECSS--STTTBTCGGG
T ss_pred             -------------CCCCHHHHHHHCCCCEEECCCC--CCCHHHHHHH
T ss_conf             -------------7468899996558978965567--6622306888


No 48 
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.05  E-value=0.32  Score=26.63  Aligned_cols=191  Identities=17%  Similarity=0.214  Sum_probs=105.9

Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHH-HHHHHHHCCCCCC--CCCC
Q ss_conf             777417822389999999999999999644204877521289769999607873378999-9798761352111--2333
Q gi|254780300|r    5 PLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSF-EVAGKLLGVHVIN--INTK   81 (316)
Q Consensus         5 ~~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SF-e~A~~~LGg~~i~--l~~~   81 (316)
                      .|. +|+-+.+.++=.+.|-..-.+++++.   +..    ++-.+.++=..|..++.+.. +.++.++|..+..  |+.+
T Consensus         3 ~m~-ildGk~vA~~i~~~l~~~v~~l~~~~---~~~----P~LavIlvg~d~aS~~Yv~~k~k~a~~~Gi~~~~~~l~~~   74 (285)
T 3l07_A            3 AMI-LIDGKSLSKDLKERLATQVQEYKHHT---AIT----PKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEH   74 (285)
T ss_dssp             CCE-ECCHHHHHHHHHHHHHHHHHHHHHHH---CCC----CEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTT
T ss_pred             CEE-EEECHHHHHHHHHHHHHHHHHHHHCC---CCC----CCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             769-98689999999999999999999705---999----7279999589756799999999999974885899978999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHC-CCCEEEECCCCCHHHH--HHCCCC------CCCCCCCC-----CCCCCCHHHHHHHHH
Q ss_conf             321013334224799987413-6714652032100554--200123------42111123-----456631223322222
Q gi|254780300|r   82 NSAMKKGENIADTIATLNALR-PNIIVIRHPYSGAVNS--LMHKIK------GPSIINAG-----DGTHEHPSQALLDAF  147 (316)
Q Consensus        82 ~s~~~kgEs~~Dta~vls~~~-~d~iv~R~~~~~~~~~--~a~~~s------~ppVINag-----~~~~~HP~Q~LaDl~  147 (316)
                      .++    |.+.+.+.-++.-- ++.|++-.|....+.+  .....+      ...-.|.|     ....--||-+++ ++
T Consensus        75 ~s~----~el~~~I~~LN~D~~V~GIivQlPlP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~PcTp~a-v~  149 (285)
T 3l07_A           75 TTE----SELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKG-IM  149 (285)
T ss_dssp             CCH----HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHH-HH
T ss_pred             CCH----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHH-HH
T ss_conf             889----9999999999646786779960676556106889860495558454688887400247766788988999-99


Q ss_pred             HHHCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             2201222-1000100103554433013344664201342055327753222112123433005845603686221000
Q gi|254780300|r  148 AIRHFKG-KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       148 Ti~e~~g-~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      .|.++.| +++|.+++.+|.  .+-|.+-+..++..-|+.|++|.-.              +.++++..++||+|+..
T Consensus       150 ~lL~~~~i~l~Gk~vvVvGr--S~iVG~Pla~lL~~~~atVt~~h~~--------------t~~l~~~~~~ADIvIsA  211 (285)
T 3l07_A          150 TMLREYGIKTEGAYAVVVGA--SNVVGKPVSQLLLNAKATVTTCHRF--------------TTDLKSHTTKADILIVA  211 (285)
T ss_dssp             HHHHHTTCCCTTCEEEEECC--CTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEEC
T ss_pred             HHHHHHCCCCCCCEEEEECC--CCCCCHHHHHHHHCCCCEEEEEECC--------------CCCHHHHHHHCCHHHHH
T ss_conf             99999599867977999889--8756558999985589749998358--------------99989986506766663


No 49 
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.94  E-value=0.054  Score=31.62  Aligned_cols=36  Identities=11%  Similarity=-0.017  Sum_probs=14.0

Q ss_pred             CCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             21289769999607873378999979876135211123
Q gi|254780300|r   42 TRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININ   79 (316)
Q Consensus        42 ~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~   79 (316)
                      +.+.+|+++.+  =-.-+-=.++.....+-|-++..++
T Consensus         7 ~~~~~k~i~ii--G~~G~mG~~~a~~l~~~g~~V~~~~   42 (286)
T 3c24_A            7 NDVGPKTVAIL--GAGGKMGARITRKIHDSAHHLAAIE   42 (286)
T ss_dssp             CSCCCCEEEEE--TTTSHHHHHHHHHHHHSSSEEEEEC
T ss_pred             CCCCCCEEEEE--CCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             66688999998--9887899999999997869699993


No 50 
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Ralstonia solanacearum}
Probab=93.88  E-value=0.06  Score=31.34  Aligned_cols=91  Identities=15%  Similarity=0.153  Sum_probs=61.1

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHH
Q ss_conf             1000100103554433013344664201342055327753222112123433005845603686221000-113312333
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPR  233 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~  233 (316)
                      .+.|.++.++|   .+++.......+..||+++....|....+... ........++++.++.+|+|... ..-.     
T Consensus       157 ~L~gk~vgIiG---~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~~~~~l~~ll~~sDiv~~~~Plt~-----  227 (352)
T 3gg9_A          157 VLKGQTLGIFG---YGKIGQLVAGYGRAFGMNVLVWGRENSKERAR-ADGFAVAESKDALFEQSDVLSVHLRLND-----  227 (352)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSHHHHHHHH-HTTCEECSSHHHHHHHCSEEEECCCCST-----
T ss_pred             EECCCEEEEEE---ECHHHHHHHHHHHCCCCEEEEECCCCHHHHHH-HHCCCCCCCHHHCCCCCCEECCCCCCCH-----
T ss_conf             23598999996---66899999999752797776316883155554-3012101341112344541113467876-----


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             444455542023575889998379985995
Q gi|254780300|r  234 SLIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       234 ~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                             +.  .--++.+.++.+|++++|-
T Consensus       228 -------~T--~~li~~~~~~~mk~ga~lI  248 (352)
T 3gg9_A          228 -------ET--RSIITVADLTRMKPTALFV  248 (352)
T ss_dssp             -------TT--TTCBCHHHHTTSCTTCEEE
T ss_pred             -------HH--HHHHHHHHHHHCCCCEEEE
T ss_conf             -------66--3576799986318851799


No 51 
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenase, oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=93.85  E-value=0.32  Score=26.64  Aligned_cols=100  Identities=16%  Similarity=0.256  Sum_probs=68.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++.++|   .+++.......+..||+++....|......  .  ......++++.+..+|+|....=..      
T Consensus       142 ~L~gk~vgI~G---~G~iG~~~a~~~~~fg~~V~~~~~~~~~~~--~--~~~~~~~l~~l~~~~Dvv~~~~plt------  208 (333)
T 1dxy_A          142 ELGQQTVGVMG---TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD--H--PDFDYVSLEDLFKQSDVIDLHVPGI------  208 (333)
T ss_dssp             CGGGSEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCCSSC--C--TTCEECCHHHHHHHCSEEEECCCCC------
T ss_pred             CCCCCEEEEEC---CCCCCHHHHHHHCCCCCEEEEECCCCCCCC--C--CEEEEEEHHHHHCCCCEEEEECCCC------
T ss_conf             14687788846---776464777776038987998605423453--3--2134423565630455466406876------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHH
Q ss_conf             4445554202357588999837998599558998768744767
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSS  277 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~  277 (316)
                           .+.  ..-++.+.++.+++++++--..   ||.=|+++
T Consensus       209 -----~~T--~~li~~~~l~~mk~ga~lIN~a---RG~lvde~  241 (333)
T 1dxy_A          209 -----EQN--THIINEAAFNLMKPGAIVINTA---RPNLIDTQ  241 (333)
T ss_dssp             -----GGG--TTSBCHHHHHHSCTTEEEEECS---CTTSBCHH
T ss_pred             -----CCC--CHHHCHHHHHHCCCCCEEEECC---CCCEECHH
T ss_conf             -----775--1132799996355784798515---77468679


No 52 
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.49  E-value=0.22  Score=27.65  Aligned_cols=103  Identities=17%  Similarity=0.297  Sum_probs=74.0

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             210001001035544330133446642013420553277532--221121234330058456036862210001133123
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      -.+.|.+++.+|   ++.+-+.....+..+|++|.++.-+..  +.....  |+++ ..++++++.+|+++|..-..   
T Consensus       216 ~~laGk~vvV~G---YG~vGrGvA~~~rg~Ga~V~V~EiDPi~aleA~md--Gf~V-~~~~ea~~~~DifvTaTGn~---  286 (435)
T 3gvp_A          216 MMFGGKQVVVCG---YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD--GFRL-VKLNEVIRQVDIVITCTGNK---  286 (435)
T ss_dssp             CCCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TCEE-CCHHHHTTTCSEEEECSSCS---
T ss_pred             CCCCCCEEEEEC---CCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHC--CCCC-CCHHHHHHHCCEEEEECCCC---
T ss_conf             560687899967---76434368998525898389996894177899854--8653-53899763288999945987---


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCC
Q ss_conf             33444455542023575889998379985995589987687447679769
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADG  281 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~Ev~~~v~d~  281 (316)
                                    --|+.+.|+.+|+++|+.-..-  ...||+-+.+..
T Consensus       287 --------------~vI~~eh~~~mKdgaIlaNaGH--fd~EId~~~L~~  320 (435)
T 3gvp_A          287 --------------NVVTREHLDRMKNSCIVCNMGH--SNTEIDVASLRT  320 (435)
T ss_dssp             --------------CSBCHHHHHHSCTTEEEEECSS--TTTTBTGGGGCS
T ss_pred             --------------CCCCHHHHHHHCCCEEEECCCC--CCCCEEHHHHHC
T ss_conf             --------------7277999998617909980476--772113999854


No 53 
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=93.39  E-value=0.23  Score=27.56  Aligned_cols=88  Identities=13%  Similarity=0.137  Sum_probs=56.9

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.|.++.++|   .+++.......+..||+++....|......     ......++.+.++.+|+|...--..+     
T Consensus       119 ~l~g~~vgIiG---~G~IG~~va~~l~~fg~~v~~~~~~~~~~~-----~~~~~~~~~~l~~~sDvv~~~~plt~-----  185 (290)
T 3gvx_A          119 LLYGKALGILG---YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTD-----  185 (290)
T ss_dssp             CCTTCEEEEEC---CSHHHHHHHHHHHHHTCEEEEECSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCT-----
T ss_pred             EECCCEEEEEC---CCCHHHHHHHHHCCCCCEEECCCCCCCCCC-----CCCCCCCHHHHHHHCCEEEEECCCCC-----
T ss_conf             21588999989---871689999985268757860345442234-----32100106655401889766257633-----


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             44455542023575889998379985995
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                            +.  ..-++.+.++.+|++++|-
T Consensus       186 ------~T--~~li~~~~l~~mk~~a~lI  206 (290)
T 3gvx_A          186 ------KT--RGMVNSRLLANARKNLTIV  206 (290)
T ss_dssp             ------TT--TTCBSHHHHTTCCTTCEEE
T ss_pred             ------CC--CCCCCHHHHHHCCCCCEEE
T ss_conf             ------56--5520158998779834785


No 54 
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A*
Probab=92.68  E-value=0.15  Score=28.68  Aligned_cols=128  Identities=19%  Similarity=0.276  Sum_probs=76.9

Q ss_pred             CCCCCCCCCCCCCC------CCHH-HHHHHHHHHHCCC-CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             23421111234566------3122-3322222220122-21000100103554433013344664201342055327753
Q gi|254780300|r  123 IKGPSIINAGDGTH------EHPS-QALLDAFAIRHFK-GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       123 ~s~ppVINag~~~~------~HP~-Q~LaDl~Ti~e~~-g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                      ...| |||.-|+.-      -|=| |...|-  |.+.- -.+.|.+++.+|   ++.+-+.....+..+|++|+++.-+.
T Consensus       171 L~~P-vi~VNDs~tK~~fDN~yGtgqS~~d~--i~r~Tn~~laGk~vvV~G---YG~vGrGvA~~~rg~Ga~V~V~EvDP  244 (436)
T 3h9u_A          171 LTIP-AMNVNDSVTKSKFDNLYGCRESLVDG--IKRATDVMIAGKTACVCG---YGDVGKGCAAALRGFGARVVVTEVDP  244 (436)
T ss_dssp             CCSC-EEECTTSHHHHTTHHHHHHHHHHHHH--HHHHHCCCCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCC-EEEECCCCCCCHHCCEEEECHHHHHH--HHHHCCCCCCCCEEEEEC---CCCCCHHHHHHHCCCCCEEEEEECCH
T ss_conf             7886-69845732031212305642229999--998608775786799955---55203237888535998899993681


Q ss_pred             C--CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCCC
Q ss_conf             2--22112123433005845603686221000113312333444455542023575889998379985995589987687
Q gi|254780300|r  195 L--LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNY  272 (316)
Q Consensus       195 ~--~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg~  272 (316)
                      .  +.....  |+++ ..++++++.+|++++..-..                 --|+.+.|+.+|+++|+.-..-  ...
T Consensus       245 i~aleA~md--Gf~V-~~~~~a~~~~DifvTaTGn~-----------------~vi~~eh~~~mKdgaIl~N~Gh--fd~  302 (436)
T 3h9u_A          245 INALQAAME--GYQV-LLVEDVVEEAHIFVTTTGND-----------------DIITSEHFPRMRDDAIVCNIGH--FDT  302 (436)
T ss_dssp             HHHHHHHHT--TCEE-CCHHHHTTTCSEEEECSSCS-----------------CSBCTTTGGGCCTTEEEEECSS--SGG
T ss_pred             HHHHHHHHC--CCEE-CCHHHHHHHCCEEEEECCCC-----------------CCCCHHHHHHHHCCCEEEECCC--CCC
T ss_conf             888999863--8850-22999883489999946998-----------------7588999998757968993167--740


Q ss_pred             CCCHHH
Q ss_conf             447679
Q gi|254780300|r  273 EISSSV  278 (316)
Q Consensus       273 Ev~~~v  278 (316)
                      ||+-+.
T Consensus       303 EId~~~  308 (436)
T 3h9u_A          303 EIQVAW  308 (436)
T ss_dssp             GBCHHH
T ss_pred             CCCHHH
T ss_conf             010887


No 55 
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=92.56  E-value=0.54  Score=25.13  Aligned_cols=156  Identities=16%  Similarity=0.215  Sum_probs=91.7

Q ss_pred             EEEEEECCCCHHHHHH-HHHHHHHCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHH-CCCCEEEECCCCCHHHH--HHCC
Q ss_conf             9999607873378999-979876135211--1233332101333422479998741-36714652032100554--2001
Q gi|254780300|r   49 QINLFLETSTRTQTSF-EVAGKLLGVHVI--NINTKNSAMKKGENIADTIATLNAL-RPNIIVIRHPYSGAVNS--LMHK  122 (316)
Q Consensus        49 ~~~lF~kpStRTR~SF-e~A~~~LGg~~i--~l~~~~s~~~kgEs~~Dta~vls~~-~~d~iv~R~~~~~~~~~--~a~~  122 (316)
                      +.++=..|..++.+.- ..++.++|..+.  .|+.+.++    |.+.+.+.-++.- .++.|++-.|....+.+  ....
T Consensus        38 iIlvgdd~aS~~Yv~~K~k~a~~~Gi~~~~~~l~~~~s~----~el~~~I~~LN~D~~V~GIlVQlPLP~~i~~~~i~~~  113 (288)
T 1b0a_A           38 VVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSE----AELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLER  113 (288)
T ss_dssp             EEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCH----HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTT
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHC
T ss_conf             999589764899999999999865965999978999999----9999999998479864548985699864310332104


Q ss_pred             CC---C---CCCCCCCC----CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf             23---4---21111234----56631223322222220122210001001035544330133446642013420553277
Q gi|254780300|r  123 IK---G---PSIINAGD----GTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAP  192 (316)
Q Consensus       123 ~s---~---ppVINag~----~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P  192 (316)
                      .+   .   ..-.|.|.    .....||-+++=+.-+.+..-+++|.+++.+|..  .-|..-+..++...|+.|++|..
T Consensus       114 I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~~~Gk~vvViGrS--~iVG~Pla~ll~~~~atVt~~hs  191 (288)
T 1b0a_A          114 IHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGAS--NIVGRPMSMELLLAGCTTTVTHR  191 (288)
T ss_dssp             SCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCC--TTTHHHHHHHHHTTTCEEEEECS
T ss_pred             CCCCCCHHCCCHHHHCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC--CCCCHHHHHHHCCCCCCEEEECC
T ss_conf             6877673006711102011687643677789999999973346589878995455--55553898860145760798357


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             53222112123433005845603686221000
Q gi|254780300|r  193 ITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       193 ~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      ..              .++.+..+.||+|+..
T Consensus       192 ~t--------------~~l~~~~~~ADIvisa  209 (288)
T 1b0a_A          192 FT--------------KNLRHHVENADLLIVA  209 (288)
T ss_dssp             SC--------------SCHHHHHHHCSEEEEC
T ss_pred             CC--------------CCHHHHCCCCCEEHHC
T ss_conf             77--------------5124203124330220


No 56 
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.95A {Pyrococcus horikoshii OT3}
Probab=92.54  E-value=0.27  Score=27.14  Aligned_cols=64  Identities=11%  Similarity=0.229  Sum_probs=47.6

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE
Q ss_conf             100010010355443301334466420134205532775322211212343300584560368622100
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMI  223 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~  223 (316)
                      .+.|.++.++|   .+++.......+..||+++....|..-. +...... ....++++.++.+|+|..
T Consensus       143 ~l~g~~vgIiG---~G~IG~~va~~~~~fg~~v~~~~~~~~~-~~~~~~~-~~~~~l~ell~~sDiv~l  206 (333)
T 2d0i_A          143 SLYGKKVGILG---MGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELK-ARYMDIDELLEKSDIVIL  206 (333)
T ss_dssp             CSTTCEEEEEC---CSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHT-EEECCHHHHHHHCSEEEE
T ss_pred             EECCCEEEEEE---CCHHHHHHHHHHHCCCCEEEEECCCCCC-CHHHHCC-CCCCCHHHHCCCCCEEEE
T ss_conf             10287799991---0789999999862568658850588871-0344307-243798895264999998


No 57 
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.97  E-value=0.074  Score=30.75  Aligned_cols=119  Identities=18%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             HHHCCCCCCCCCCCCC----CCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCC-------CC-CCCCCCCCCCCC
Q ss_conf             7613521112333321----01333422479998741367146520321005542001-------23-421111234566
Q gi|254780300|r   69 KLLGVHVININTKNSA----MKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHK-------IK-GPSIINAGDGTH  136 (316)
Q Consensus        69 ~~LGg~~i~l~~~~s~----~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~-------~s-~ppVINag~~~~  136 (316)
                      .+-|-.+..+|.....    .+.|-...++..-+..- +|++++-.+...++.+....       .. .-.+|+..  . 
T Consensus        50 ~k~G~~V~~~d~~~~k~~~l~~~Ga~~~~s~~e~~~~-adiii~~v~~~~a~~~v~~~~~~l~~~~~~g~iiid~s--T-  125 (316)
T 2uyy_A           50 LKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVST-CDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMS--T-  125 (316)
T ss_dssp             HHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHH-CSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS--C-
T ss_pred             HHCCCEEEEECCCHHHHHHHHHCCCEECCCHHHHHHC-CCEEEEECCCCHHHHHHHHCCCHHHHHCCCCCEEEECC--C-
T ss_conf             9789969998399999999998599465999999845-98599972673667999635405764088998899557--8-


Q ss_pred             CCHHHHHHHHHHHHCCC---------CCCC----C-CCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             31223322222220122---------2100----0-100103554433013344664201342055327753
Q gi|254780300|r  137 EHPSQALLDAFAIRHFK---------GKIS----N-LHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       137 ~HP~Q~LaDl~Ti~e~~---------g~l~----~-l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                      .+|.++..-.-.+.++.         |...    | +.+..-||   ..+......++..++-++..+++.+
T Consensus       126 ~~p~~~~~~~~~l~~~g~~~vdapv~g~~~~a~~g~l~~~~gG~---~~~~~~~~~il~~~~~~~~~~G~~G  194 (316)
T 2uyy_A          126 VDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGD---RGLYEDCSSCFQAMGKTSFFLGEVG  194 (316)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEEC---HHHHHHTHHHHHHHEEEEEECSSTT
T ss_pred             CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCCC---HHHHHHHCHHHHHHCCEEEEECCCC
T ss_conf             87677999999999759937725777880405677257644886---7998862216775158279943865


No 58 
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.96  E-value=0.47  Score=25.53  Aligned_cols=89  Identities=19%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE-EECCHHHHHH
Q ss_conf             000100103554433013344664201342055327753222112123433005845603686221000-1133123334
Q gi|254780300|r  156 ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL-RMQQERIPRS  234 (316)
Q Consensus       156 l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~-~~~~e~~~~~  234 (316)
                      +.+.++..+|   .+++.......+..+|+++....|......    ..+....++++.++.+|+|..- ..-       
T Consensus       154 l~~k~~giiG---~G~iG~~va~~~~~~g~~v~~~~~~~~~~~----~~~~~~~~L~ell~~sDiIslh~Plt-------  219 (416)
T 3k5p_A          154 VRGKTLGIVG---YGNIGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELLKTSDVVSLHVPSS-------  219 (416)
T ss_dssp             STTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHHHHCSEEEECCCC--------
T ss_pred             ECCEEEEEEE---CCCCCCEEEEECCCCCCEEEEECCCCCCHH----CCEEECCCHHHHHHHCCEEEECCCCC-------
T ss_conf             0460899981---266421112310135515776316544010----23121489999975288888714530-------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             4445554202357588999837998599558
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                           .+.  ..-++.+.++.+|++++|.-+
T Consensus       220 -----~~T--~~lIn~~~l~~mK~ga~lIN~  243 (416)
T 3k5p_A          220 -----KST--SKLITEAKLRKMKKGAFLINN  243 (416)
T ss_dssp             -----------CCBCHHHHHHSCTTEEEEEC
T ss_pred             -----CCC--CCHHHHHHHHCCCCCCEEEEC
T ss_conf             -----023--266689999508999868852


No 59 
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.16  E-value=0.95  Score=23.57  Aligned_cols=91  Identities=20%  Similarity=0.257  Sum_probs=61.2

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHH
Q ss_conf             10001001035544330133446642013420553277532221121234330058456036862210001133123334
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRS  234 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~  234 (316)
                      .+.+.++.++|   .+++.......+..+|+.+....|...  +....  .....++++.+..+|+|....=..      
T Consensus       143 ~l~~~~vgi~G---~G~ig~~~a~~l~~~~~~v~~~~~~~~--~~~~~--~~~~~~l~~ll~~sDiv~~~~plt------  209 (331)
T 1xdw_A          143 EVRNCTVGVVG---LGRIGRVAAQIFHGMGATVIGEDVFEI--KGIED--YCTQVSLDEVLEKSDIITIHAPYI------  209 (331)
T ss_dssp             CGGGSEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSSCC--CSCTT--TCEECCHHHHHHHCSEEEECCCCC------
T ss_pred             EEECCEEEEEC---CCCCCHHHHHHHHCCCCEEECCCCCCC--CCCCC--EEEECCHHHHHHHCCCCCCCCCCC------
T ss_conf             43142999986---676443789876446834630444333--34433--013235777543315554346887------


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCEEECC
Q ss_conf             4445554202357588999837998599558
Q gi|254780300|r  235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHP  265 (316)
Q Consensus       235 ~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc  265 (316)
                           .+.  ..-++.+.++.+|++++|--.
T Consensus       210 -----~~T--~~li~~~~l~~mk~~a~lIN~  233 (331)
T 1xdw_A          210 -----KEN--GAVVTRDFLKKMKDGAILVNC  233 (331)
T ss_dssp             -----TTT--CCSBCHHHHHTSCTTEEEEEC
T ss_pred             -----CCC--CCCCCHHHHHHCCCCCEEEEE
T ss_conf             -----456--674689999608999889991


No 60 
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with cofactor and product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.12  E-value=0.079  Score=30.57  Aligned_cols=73  Identities=14%  Similarity=0.196  Sum_probs=48.6

Q ss_pred             CCCCCCCEEECC--------CCCCCCHHHHHHHHHHCCCCEEEECCCCC-----------CCCCCCCCCCCCCCCCHHHC
Q ss_conf             210001001035--------54433013344664201342055327753-----------22211212343300584560
Q gi|254780300|r  154 GKISNLHIAICG--------DILHSRVARSDIMLLNTMGARIRVIAPIT-----------LLPKDISNMGVEVFHDMQKG  214 (316)
Q Consensus       154 g~l~~l~ia~vG--------D~~~~~v~~S~~~~~~~~g~~v~~~~P~~-----------~~~~~~~~~~~~~~~d~~ea  214 (316)
                      +.+.+.+|++.|        |+++| -+..++..+...|++|.+.-|--           +........+.....+++++
T Consensus       309 ~~~~~~ki~ilGlafK~~t~D~R~S-pa~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  387 (436)
T 1mv8_A          309 TSHDTRKVGLLGLSFKAGTDDLRES-PLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEV  387 (436)
T ss_dssp             TTSSCCEEEEECCSSSTTCCCCTTC-HHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHH
T ss_pred             HHCCCCEEEEECCCCCCCCCCCCCC-HHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHHHCCCCCCCCCCEECCCHHHH
T ss_conf             6305878966447558999854467-099999999978898999899988777502012220012444453013889999


Q ss_pred             CCCCCEEEEEEEC
Q ss_conf             3686221000113
Q gi|254780300|r  215 LKNVDVIMILRMQ  227 (316)
Q Consensus       215 ~~~aDvv~~~~~~  227 (316)
                      ++++|+|+....+
T Consensus       388 ~~~~D~iii~t~h  400 (436)
T 1mv8_A          388 VASSDVLVLGNGD  400 (436)
T ss_dssp             HHHCSEEEECSCC
T ss_pred             HHCCCEEEEECCC
T ss_conf             8559999990688


No 61 
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP, oxidoreductase, PSI; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=88.88  E-value=1.2  Score=22.95  Aligned_cols=176  Identities=15%  Similarity=0.176  Sum_probs=97.8

Q ss_pred             EEEECCCCHHHHHH-HHHHHHHCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHH-CCCCEEEECCCCCHHHH--HHCCCC
Q ss_conf             99607873378999-9798761352111--233332101333422479998741-36714652032100554--200123
Q gi|254780300|r   51 NLFLETSTRTQTSF-EVAGKLLGVHVIN--INTKNSAMKKGENIADTIATLNAL-RPNIIVIRHPYSGAVNS--LMHKIK  124 (316)
Q Consensus        51 ~lF~kpStRTR~SF-e~A~~~LGg~~i~--l~~~~s~~~kgEs~~Dta~vls~~-~~d~iv~R~~~~~~~~~--~a~~~s  124 (316)
                      +.=..|..++.+.. ..++..+|.....  ++.+.++    |.+.+.+..++.- .++.|++-.|....+.+  .....+
T Consensus        39 lvg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~e----~el~~~I~~lN~d~~v~GIlvqlPlP~~~~~~~i~~~I~  114 (281)
T 2c2x_A           39 LVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADIST----ATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVD  114 (281)
T ss_dssp             EESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCH----HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSC
T ss_pred             EECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHEEECC
T ss_conf             9699878999999999999985997998526887789----999999999828986553788535865444412022027


Q ss_pred             ---CC---CCCCC-----CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCC--CCEEEECC
Q ss_conf             ---42---11112-----3456631223322222220122210001001035544330133446642013--42055327
Q gi|254780300|r  125 ---GP---SIINA-----GDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTM--GARIRVIA  191 (316)
Q Consensus       125 ---~p---pVINa-----g~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~--g~~v~~~~  191 (316)
                         .+   .-.|.     |.. ...||-+++=+--+.+...+++|.+++.+|..  .-|..-+..++...  ++.+++|.
T Consensus       115 p~KDVDGl~~~N~g~l~~~~~-~~~PcT~~ai~~lL~~~~i~l~Gk~vvViGrS--~iVG~Pla~lL~~~~~~atvt~~h  191 (281)
T 2c2x_A          115 PAKDADGLHPTNLGRLVLGTP-APLPCTPRGIVHLLRRYDISIAGAHVVVIGRG--VTVGRPLGLLLTRRSENATVTLCH  191 (281)
T ss_dssp             GGGBTTSCCHHHHHHHHHTCC-CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCC--TTTHHHHHHHHTSTTTCCEEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC--CCCHHHHHHHHHHHHCCCEEEEEC
T ss_conf             333656556246631024676-66885089999999996988768668998058--752789999974543278068707


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCC
Q ss_conf             7532221121234330058456036862210001133123334444555420235758899983799859955899
Q gi|254780300|r  192 PITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGP  267 (316)
Q Consensus       192 P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP  267 (316)
                      ..              +.++++..++||+|++..- ..                +-++.+++   ++++++-.+.-
T Consensus       192 ~~--------------T~~l~~~~~~ADIvisavG-~p----------------~~i~~~~i---k~gavvIDvG~  233 (281)
T 2c2x_A          192 TG--------------TRDLPALTRQADIVVAAVG-VA----------------HLLTADMV---RPGAAVIDVGV  233 (281)
T ss_dssp             TT--------------CSCHHHHHTTCSEEEECSC-CT----------------TCBCGGGS---CTTCEEEECCE
T ss_pred             CC--------------CCCHHHHHHHCCHHHHHCC-CC----------------CCCCHHHC---CCCCEEEEECC
T ss_conf             88--------------8577999872831443327-76----------------53668565---89958999427


No 62 
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.30  E-value=0.44  Score=25.70  Aligned_cols=74  Identities=22%  Similarity=0.338  Sum_probs=48.4

Q ss_pred             CCCCCCCEEECC--------CCCCCCHHHHHHHHHHCCCCEEEECCCCCCC-CCCCCCCCCCCCCCHHHCCCCCCEEEE-
Q ss_conf             210001001035--------5443301334466420134205532775322-211212343300584560368622100-
Q gi|254780300|r  154 GKISNLHIAICG--------DILHSRVARSDIMLLNTMGARIRVIAPITLL-PKDISNMGVEVFHDMQKGLKNVDVIMI-  223 (316)
Q Consensus       154 g~l~~l~ia~vG--------D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~-~~~~~~~~~~~~~d~~ea~~~aDvv~~-  223 (316)
                      +.+++.+|+++|        |.++| .+..++..+...|++|.+.-|.... .....+..+..+.++.++++++|+|+. 
T Consensus       314 ~~~~~~~I~IlGlayKp~t~d~R~S-ps~~l~~~L~~~g~~V~~yDP~v~~~~~~~~~~~~~~~~~~~ea~~~aD~iii~  392 (450)
T 3gg2_A          314 GNVQGRCVAIWGLSFKPGTDDMREA-PSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV  392 (450)
T ss_dssp             TCCTTCEEEEECCSSSTTCCCCTTC-HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred             HCCCCCCEEEECCCCCCCCHHHCCC-HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCEEEECCHHHHHCCCCEEEEE
T ss_conf             2025882002324248973111254-179999999986995899899788789997278807738999997069889990


Q ss_pred             EEECC
Q ss_conf             01133
Q gi|254780300|r  224 LRMQQ  228 (316)
Q Consensus       224 ~~~~~  228 (316)
                      +.|++
T Consensus       393 t~h~~  397 (450)
T 3gg2_A          393 TEWKE  397 (450)
T ss_dssp             SCCGG
T ss_pred             CCCHH
T ss_conf             39857


No 63 
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A*
Probab=88.26  E-value=0.38  Score=26.14  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=48.7

Q ss_pred             CCCCCCCCEEECC--------CCCCCCHHHHHHHHHHCCCCEEEECCCCCCC---------CC----CCCCCCCCCCCCH
Q ss_conf             2210001001035--------5443301334466420134205532775322---------21----1212343300584
Q gi|254780300|r  153 KGKISNLHIAICG--------DILHSRVARSDIMLLNTMGARIRVIAPITLL---------PK----DISNMGVEVFHDM  211 (316)
Q Consensus       153 ~g~l~~l~ia~vG--------D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~---------~~----~~~~~~~~~~~d~  211 (316)
                      .+++++.+|+..|        |+++| .+--++..+...|++|.+.-|..-.         +.    +.....+....|+
T Consensus       324 ~~~~~~~~I~ilGlafK~~t~d~R~S-~~~~l~~~L~~~g~~v~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (467)
T 2q3e_A          324 FNTVTDKKIAILGFAFKKDTGDTRES-SSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDP  402 (467)
T ss_dssp             TTCCTTCEEEEECCSSSTTCCCCTTC-HHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSH
T ss_pred             CCCCCCCEEEEEEEECCCCCCCCCCC-HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCEEEECCH
T ss_conf             26668998999986206888876568-58999999997799899989988988986651454420123214532550899


Q ss_pred             HHCCCCCCEEE-EEEEC
Q ss_conf             56036862210-00113
Q gi|254780300|r  212 QKGLKNVDVIM-ILRMQ  227 (316)
Q Consensus       212 ~ea~~~aDvv~-~~~~~  227 (316)
                      +++++++|+|+ .+.|.
T Consensus       403 ~ea~~~aD~vii~t~h~  419 (467)
T 2q3e_A          403 YEACDGAHAVVICTEWD  419 (467)
T ss_dssp             HHHHTTCSEEEECSCCG
T ss_pred             HHHHCCCCEEEEECCCH
T ss_conf             99974698899962885


No 64 
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X- RAY crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.06  E-value=0.4  Score=25.98  Aligned_cols=20  Identities=20%  Similarity=0.328  Sum_probs=11.7

Q ss_pred             HHHHHHCCCCEEEECCCCCC
Q ss_conf             46642013420553277532
Q gi|254780300|r  176 DIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       176 ~~~~~~~~g~~v~~~~P~~~  195 (316)
                      ....+..+|..+....|++.
T Consensus       151 ~~~~~~~~g~~~~~~~~~~H  170 (279)
T 2f1k_A          151 LRSVLEPLGVKIYLCTPADH  170 (279)
T ss_dssp             HHHHHGGGTCEEEECCHHHH
T ss_pred             HHHHHHCCCCEEEECCHHHH
T ss_conf             98766505998875348889


No 65 
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreductase, porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.25  E-value=1  Score=23.40  Aligned_cols=81  Identities=17%  Similarity=0.198  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCCCCCCC-CH-HHCCC
Q ss_conf             3322222220122210001001035544330133446642013420553277532--22112123433005-84-56036
Q gi|254780300|r  141 QALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL--LPKDISNMGVEVFH-DM-QKGLK  216 (316)
Q Consensus       141 Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~--~~~~~~~~~~~~~~-d~-~ea~~  216 (316)
                      -.-.|-.-+.=.+=+++|.+|..+|.   ++|+..-+..+...|++|++++|+-.  +........++... +. .+-+.
T Consensus        14 ~~~~~~~~~fPlfl~L~~k~VLVVGg---G~vA~rKi~~Ll~~ga~VtVisp~~~~el~~l~~~~~i~~~~r~~~~~dl~   90 (223)
T 3dfz_A           14 SGHIEGRHMYTVMLDLKGRSVLVVGG---GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLL   90 (223)
T ss_dssp             --------CCEEEECCTTCCEEEECC---SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSS
T ss_pred             CCHHHCCCCCCEEEECCCCEEEEECC---CHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCEEEECCCCHHHCC
T ss_conf             34210596226089839985999898---899999999997489979999388998999999769969995688866718


Q ss_pred             CCCEEEEE
Q ss_conf             86221000
Q gi|254780300|r  217 NVDVIMIL  224 (316)
Q Consensus       217 ~aDvv~~~  224 (316)
                      +++.|+..
T Consensus        91 ~~~lViaA   98 (223)
T 3dfz_A           91 NVFFIVVA   98 (223)
T ss_dssp             SCSEEEEC
T ss_pred             CCCEEEEC
T ss_conf             96499977


No 66 
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=86.77  E-value=0.83  Score=23.93  Aligned_cols=69  Identities=22%  Similarity=0.318  Sum_probs=49.6

Q ss_pred             CCCCCCCCEEECC--------CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE-
Q ss_conf             2210001001035--------5443301334466420134205532775322211212343300584560368622100-
Q gi|254780300|r  153 KGKISNLHIAICG--------DILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMI-  223 (316)
Q Consensus       153 ~g~l~~l~ia~vG--------D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~-  223 (316)
                      .+.+++.+|+.+|        |+++| .+.-++..+..-|++|.+.-|--.     ...+++...+++++++++|+|+. 
T Consensus       348 ~~~~~~~~I~ilGlafK~~t~d~R~S-ps~~l~~~L~~~g~~V~iyDP~v~-----~~~~~~~~~~l~~~~~~aD~ivi~  421 (478)
T 3g79_A          348 GKKMDGSKVAMLGWAFIKDSDDARNT-PSEPYRDLCLKAGASVMVHDPYVV-----NYPGVEISDNLEEVVRNADAIVVL  421 (478)
T ss_dssp             TCCSTTCEEEEECSSSSTTCSCCTTC-THHHHHHHHHHHTCEEEEECSSCC-----CBTTBCEESCHHHHHTTCSEEEEC
T ss_pred             CCCCCCCEEEEEEECCCCCCCCHHCC-CHHHHHHHHHHCCCEEEEECCCCC-----CCCCCEECCCHHHHHHCCCEEEEE
T ss_conf             78757866789863147999741018-599999999968898999899656-----778975628999998379889996


Q ss_pred             EEEC
Q ss_conf             0113
Q gi|254780300|r  224 LRMQ  227 (316)
Q Consensus       224 ~~~~  227 (316)
                      +.|.
T Consensus       422 t~h~  425 (478)
T 3g79_A          422 AGHS  425 (478)
T ss_dssp             SCCH
T ss_pred             CCCH
T ss_conf             6986


No 67 
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative; 2.19A {Bacteroides fragilis nctc 9343}
Probab=86.74  E-value=0.39  Score=26.05  Aligned_cols=20  Identities=15%  Similarity=0.044  Sum_probs=10.3

Q ss_pred             HHHHHHHHHCCCCEEEECCC
Q ss_conf             33446642013420553277
Q gi|254780300|r  173 ARSDIMLLNTMGARIRVIAP  192 (316)
Q Consensus       173 ~~S~~~~~~~~g~~v~~~~P  192 (316)
                      ......++..+|..+....+
T Consensus       149 ~~~~~~l~~~lg~~~~~~~~  168 (266)
T 3d1l_A          149 AAFLKAIASTLSNRVYDADS  168 (266)
T ss_dssp             HHHHHHHHHTTCSCEEECCH
T ss_pred             HHHHHHHHHHHCCCEEEEEC
T ss_conf             99999999981990899723


No 68 
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=85.67  E-value=0.43  Score=25.76  Aligned_cols=135  Identities=10%  Similarity=0.132  Sum_probs=68.0

Q ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHH---CCCCCC---CCCCCCEEEEE-EECCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             78223899999999999999996442---048775---21289769999-607873378999979876135211123333
Q gi|254780300|r   10 VTVKDLSMQDVNYLLDRANEYFQKKS---HFNPST---TRLQGLTQINL-FLETSTRTQTSFEVAGKLLGVHVININTKN   82 (316)
Q Consensus        10 L~~~dl~~~el~~ll~~A~~~k~~~~---~~~~~~---~~L~gk~~~~l-F~kpStRTR~SFe~A~~~LGg~~i~l~~~~   82 (316)
                      |.+-|..++-++.+-..+..+.+...   +....+   ..|+|...+.. |.-....-|..=|.--.+.|-    +..++
T Consensus        60 i~L~DId~~rL~~~~~~~~~~~~~~~~~~~v~~ttD~~eAl~gADfVi~t~~vGg~~~r~~De~Ip~kyGi----~g~eT  135 (472)
T 1u8x_X           60 LKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGV----VGQET  135 (472)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTC----CCCSS
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCC----CCCCC
T ss_conf             99982888899999999999999609980799958999985799999984122886426888754675591----56413


Q ss_pred             CCC-------CCCCCCCCHHHHHHHHCCCCEEEECCCCCH-HHHHH-CCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             210-------133342247999874136714652032100-55420-01234211112345663122332222222
Q gi|254780300|r   83 SAM-------KKGENIADTIATLNALRPNIIVIRHPYSGA-VNSLM-HKIKGPSIINAGDGTHEHPSQALLDAFAI  149 (316)
Q Consensus        83 s~~-------~kgEs~~Dta~vls~~~~d~iv~R~~~~~~-~~~~a-~~~s~ppVINag~~~~~HP~Q~LaDl~Ti  149 (316)
                      .+.       ..=--+.|.++.+..+.+|++++=....-. +.+.. +.+....||..|++.. +-.+.++.++-.
T Consensus       136 ~G~GG~~~alRtipv~leIa~~I~e~~PdAwllNyTNP~~ivt~al~r~~p~~kvvGlCh~~~-~~~~~la~~Lg~  210 (472)
T 1u8x_X          136 CGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPV-GIEDRMAQILGL  210 (472)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTTCCEEECCSHHH-HHHHHHHHHHTC
T ss_pred             CCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCHH-HHHHHHHHHCCC
T ss_conf             562388874032899999999999669984999817868999999998589988898798679-999999998399


No 69 
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initiative; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=83.81  E-value=2.2  Score=21.25  Aligned_cols=70  Identities=14%  Similarity=0.254  Sum_probs=38.8

Q ss_pred             CCCCHHHHHHHHCCCCEEEECCCCCHHH--HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECC
Q ss_conf             4224799987413671465203210055--420012342111123456631223322222220122210001001035
Q gi|254780300|r   90 NIADTIATLNALRPNIIVIRHPYSGAVN--SLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICG  165 (316)
Q Consensus        90 s~~Dta~vls~~~~d~iv~R~~~~~~~~--~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vG  165 (316)
                      -+.|.++-+..|.+|++++=....-.+.  .+.+.+...+||..|++.. +....+|..+-+     +.+.+.+-+.|
T Consensus       131 v~~~i~~~i~~~~P~A~lln~TNP~~i~t~a~~r~~p~~kviGlC~~~~-~~r~~lA~~Lgv-----~~~~v~~~~~G  202 (450)
T 1s6y_A          131 VILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQEKVVGLCNVPI-GMRMGVAKLLGV-----DADRVHIDFAG  202 (450)
T ss_dssp             HHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHCCCCCEEECCSHHH-HHHHHHHHHHTS-----CGGGEEEEEEE
T ss_pred             HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEECCCCHH-HHHHHHHHHHCC-----CHHHCEEEEEC
T ss_conf             9999999875159984999978868999999998689987771177519-999999999498-----97765432556


No 70 
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.74  E-value=0.32  Score=26.61  Aligned_cols=86  Identities=10%  Similarity=0.031  Sum_probs=35.4

Q ss_pred             CCCEEEECCCCCHHHHHHC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-------CCC----CCC-CCEEEC
Q ss_conf             6714652032100554200------1234211112345663122332222222012-------221----000-100103
Q gi|254780300|r  103 PNIIVIRHPYSGAVNSLMH------KIKGPSIINAGDGTHEHPSQALLDAFAIRHF-------KGK----ISN-LHIAIC  164 (316)
Q Consensus       103 ~d~iv~R~~~~~~~~~~a~------~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~-------~g~----l~~-l~ia~v  164 (316)
                      +|++++-.+....+.+...      ......||+... ..-.-++.+++...=.-.       .|.    -.+ +.+..-
T Consensus        66 ~d~Vi~~v~~~~~~~~vl~~~~~~~~~~g~~iid~st-~~p~~~~~~~~~~~~~g~~~ldapv~g~~~~a~~~~~~~~~~  144 (306)
T 3l6d_A           66 SPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTT-NAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHT  144 (306)
T ss_dssp             SSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCC-CCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEE
T ss_pred             CCEEEECCCCHHHHHHHHHHHCCHHHCCCCEEECCCC-CCHHHHHHHHHHHCCCCCEEEECEEECCCCCCCCCCEEEEEC
T ss_conf             9978960688999999987203033235664631687-870466888866502682365132312543245664279973


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf             5544330133446642013420553277
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTMGARIRVIAP  192 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~g~~v~~~~P  192 (316)
                      ||   .........++..+|.++..+++
T Consensus       145 G~---~~~~~~~~~ll~~l~~~~~~~g~  169 (306)
T 3l6d_A          145 GD---REAFEQHRALLEGLAGHTVFLPW  169 (306)
T ss_dssp             EC---HHHHHHHHHHHHTTCSEEEECCH
T ss_pred             CC---HHHHHHHHHHHHHHCCCEEECCC
T ss_conf             76---66788999999995895498377


No 71 
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.58  E-value=0.52  Score=25.23  Aligned_cols=88  Identities=19%  Similarity=0.274  Sum_probs=40.1

Q ss_pred             HHHHCCCCEEEECCCCCHHHHHH-------CCC-CCCCCCCCCCCCCCCHHH--HHHHHHHHHCCCCC-C----------
Q ss_conf             87413671465203210055420-------012-342111123456631223--32222222012221-0----------
Q gi|254780300|r   98 LNALRPNIIVIRHPYSGAVNSLM-------HKI-KGPSIINAGDGTHEHPSQ--ALLDAFAIRHFKGK-I----------  156 (316)
Q Consensus        98 ls~~~~d~iv~R~~~~~~~~~~a-------~~~-s~ppVINag~~~~~HP~Q--~LaDl~Ti~e~~g~-l----------  156 (316)
                      +... +|+++.-.++...+.+..       ... +.-.||+..  . .+|.+  .++..+  .++... +          
T Consensus        57 ~~~~-~dvv~~~l~~~~a~~~v~~~~~~i~~~~~~g~iiid~s--T-~~p~~~~~~~~~~--~~~g~~~ldaPVsGg~~~  130 (301)
T 3cky_A           57 VAAA-SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMS--S-VSPSSTLKMAKVA--AEKGIDYVDAPVSGGTKG  130 (301)
T ss_dssp             HHHH-CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECC--C-CCHHHHHHHHHHH--HHTTCEEEECCEESHHHH
T ss_pred             HHHC-CCEEEEEECCHHHHHHHHHCCCCHHHHCCCCCEEEECC--C-CCHHHHHHHHHHH--HHCCCEEEECCCCCCHHH
T ss_conf             9845-87368850568899999817503655258992899899--9-9989999999999--976992892477588778


Q ss_pred             --CC-CCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             --00-100103554433013344664201342055327753
Q gi|254780300|r  157 --SN-LHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       157 --~~-l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                        .| +.+..-||   -.+......++..++-++..++|.+
T Consensus       131 A~~g~l~i~~gG~---~~~~~~~~~~l~~~~~~i~~~G~~G  168 (301)
T 3cky_A          131 AEAGTLTIMVGAS---EAVFEKIQPVLSVIGKDIYHVGDTG  168 (301)
T ss_dssp             HHHTCEEEEEESC---HHHHHHHHHHHHHHEEEEEEEESTT
T ss_pred             HHCCCEEEEECCC---HHHHHHCCHHHHHHCCCEEEECCCC
T ss_conf             6249758984799---9999867099998489779958975


No 72 
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A*
Probab=83.40  E-value=0.62  Score=24.78  Aligned_cols=95  Identities=21%  Similarity=0.216  Sum_probs=45.9

Q ss_pred             CHHHHHHHHCCCCEEEECCCCCHHHHHHC-------CC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-----CCC--
Q ss_conf             47999874136714652032100554200-------12-3421111234566312233222222201222-----100--
Q gi|254780300|r   93 DTIATLNALRPNIIVIRHPYSGAVNSLMH-------KI-KGPSIINAGDGTHEHPSQALLDAFAIRHFKG-----KIS--  157 (316)
Q Consensus        93 Dta~vls~~~~d~iv~R~~~~~~~~~~a~-------~~-s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g-----~l~--  157 (316)
                      |+..-+..- +|++++=.+....+.+...       .. ..-.||+..  . .+|..+-.=.-.+.++..     .+.  
T Consensus        51 ~s~~e~~~~-~dvvi~~l~~~~~~~~V~~~~~g~~~~~~~g~iiid~s--T-~~p~~~~~~~~~~~~~g~~~vdapvsGg  126 (302)
T 2h78_A           51 RSARDAVQG-ADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECS--T-IAPTSARKIHAAARERGLAMLDAPVSGG  126 (302)
T ss_dssp             SSHHHHHTT-CSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECS--C-CCHHHHHHHHHHHHHTTCCEEECCEESC
T ss_pred             CCHHHHHHC-CCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCEEEECC--C-CCHHHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf             899999856-78611038947779999716300532589997899888--8-9989999999999976992892588799


Q ss_pred             ------C-CCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             ------0-100103554433013344664201342055327753
Q gi|254780300|r  158 ------N-LHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       158 ------~-l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                            | +.+..-||   ..+.......+..++.++..++|.+
T Consensus       127 ~~~a~~g~l~~~~gG~---~~~~~~~~~vL~~~~~~v~~~G~~G  167 (302)
T 2h78_A          127 TAGAAAGTLTFMVGGD---AEALEKARPLFEAMGRNIFHAGPDG  167 (302)
T ss_dssp             HHHHHHTCEEEEEESC---HHHHHHHHHHHHHHEEEEEEEESTT
T ss_pred             HHHHHCCCEEEEECCC---HHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf             7787529879998378---9999999999998479189968956


No 73 
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.33  E-value=0.47  Score=25.52  Aligned_cols=96  Identities=17%  Similarity=0.203  Sum_probs=43.9

Q ss_pred             CHHHHHHHHCCCCEEEECCCCCHHHHHH-------CCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---------CC
Q ss_conf             4799987413671465203210055420-------012-342111123456631223322222220122---------21
Q gi|254780300|r   93 DTIATLNALRPNIIVIRHPYSGAVNSLM-------HKI-KGPSIINAGDGTHEHPSQALLDAFAIRHFK---------GK  155 (316)
Q Consensus        93 Dta~vls~~~~d~iv~R~~~~~~~~~~a-------~~~-s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~---------g~  155 (316)
                      ++..-+..- +|++++=.+....+.+..       +.. ....||+..... -.=+|.++..+.  ++.         |.
T Consensus        53 ~s~~e~~~~-~divi~~v~~~~~v~~v~~~~~~i~~~~~~g~iiid~sT~~-p~~~~~~~~~~~--~~G~~~vd~pv~gg  128 (299)
T 1vpd_A           53 STAKAIAEQ-CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIA-PLASREISDALK--AKGVEMLDAPVSGG  128 (299)
T ss_dssp             SSHHHHHHH-CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC-HHHHHHHHHHHH--TTTCEEEECCEESH
T ss_pred             CCHHHHHHC-CCEEEEECCCHHHHHHHHHCCHHHHHCCCCCCEEEECCCCC-HHHHHHHHHHHH--HCCCEEECCCCCCC
T ss_conf             899999847-99899975987899999958246873499999899899897-689999999999--76995877788588


Q ss_pred             ----CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             ----000100103554433013344664201342055327753
Q gi|254780300|r  156 ----ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       156 ----l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                          .+|--..++|.  ...+.......+..++-++..+++.+
T Consensus       129 ~~~a~~g~l~i~~gg--~~~~~~~~~~~l~~~~~~~~~~G~~G  169 (299)
T 1vpd_A          129 EPKAIDGTLSVMVGG--DKAIFDKYYDLMKAMAGSVVHTGDIG  169 (299)
T ss_dssp             HHHHHHTCEEEEEES--CHHHHHHHHHHHHTTEEEEEEEESTT
T ss_pred             CHHHHCCCEEEEEEC--CHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf             036634971799937--58888999999999728856539955


No 74 
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.07  E-value=2.4  Score=20.93  Aligned_cols=18  Identities=11%  Similarity=0.252  Sum_probs=9.2

Q ss_pred             HHHCCHHHHHHHHHHHHH
Q ss_conf             223899999999999999
Q gi|254780300|r   12 VKDLSMQDVNYLLDRANE   29 (316)
Q Consensus        12 ~~dl~~~el~~ll~~A~~   29 (316)
                      +.|.+++.+..-.+...+
T Consensus        34 l~D~~~~~l~~~~~~i~~   51 (319)
T 2dpo_A           34 LYDIEPRQITGALENIRK   51 (319)
T ss_dssp             EECSCHHHHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHHHHH
T ss_conf             997998999999999999


No 75 
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, protein structure initiative; 1.88A {Caenorhabditis elegans}
Probab=81.05  E-value=1.1  Score=23.16  Aligned_cols=74  Identities=22%  Similarity=0.178  Sum_probs=48.0

Q ss_pred             CCCCCCCCEEECC--------CCCCCCHHHHHHHHHHCCCCEEEECCCCCCC---CCC------C--CCCCCCCCCCHHH
Q ss_conf             2210001001035--------5443301334466420134205532775322---211------2--1234330058456
Q gi|254780300|r  153 KGKISNLHIAICG--------DILHSRVARSDIMLLNTMGARIRVIAPITLL---PKD------I--SNMGVEVFHDMQK  213 (316)
Q Consensus       153 ~g~l~~l~ia~vG--------D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~---~~~------~--~~~~~~~~~d~~e  213 (316)
                      .+++++.+|+..|        |+++| .+--++..+...|++|.+.-|---.   ..+      .  ....+....|+.+
T Consensus       330 ~~~~~~~~I~ilGlafK~~t~d~R~S-ps~~li~~L~~~g~~V~~~DP~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  408 (481)
T 2o3j_A          330 FNTVTDKKIAIFGFAFKKNTGDTRES-SAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYA  408 (481)
T ss_dssp             TTCCTTCEEEEECCSSSTTCCCCTTC-HHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHH
T ss_pred             CCCCCCCEEEEEEECCCCCCCCCCCC-HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCEECCCHHH
T ss_conf             48877767999731257777301035-08999999998799899989968878876666420003443320310389999


Q ss_pred             CCCCCCEEE-EEEEC
Q ss_conf             036862210-00113
Q gi|254780300|r  214 GLKNVDVIM-ILRMQ  227 (316)
Q Consensus       214 a~~~aDvv~-~~~~~  227 (316)
                      +++++|+|+ .+.|.
T Consensus       409 a~~~aD~vIi~t~h~  423 (481)
T 2o3j_A          409 AARGAHAIVVLTEWD  423 (481)
T ss_dssp             HHTTCSEEEECSCCG
T ss_pred             HHCCCCEEEEECCCH
T ss_conf             965798899964986


No 76 
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=80.91  E-value=1.9  Score=21.65  Aligned_cols=11  Identities=9%  Similarity=0.202  Sum_probs=3.9

Q ss_pred             HHHHHHHHHCC
Q ss_conf             99979876135
Q gi|254780300|r   63 SFEVAGKLLGV   73 (316)
Q Consensus        63 SFe~A~~~LGg   73 (316)
                      +|..+...+..
T Consensus        22 a~~l~~~~l~~   32 (317)
T 3d0o_A           22 AFSLVNQSIVD   32 (317)
T ss_dssp             HHHHHHHCSCS
T ss_pred             HHHHHHCCCCC
T ss_conf             99997079988


No 77 
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.15  E-value=2.2  Score=21.18  Aligned_cols=17  Identities=6%  Similarity=-0.103  Sum_probs=7.4

Q ss_pred             HHHCCHHHHHHHHHHHH
Q ss_conf             22389999999999999
Q gi|254780300|r   12 VKDLSMQDVNYLLDRAN   28 (316)
Q Consensus        12 ~~dl~~~el~~ll~~A~   28 (316)
                      +-|.+++.++...++..
T Consensus        43 l~D~~~e~l~~~~~~i~   59 (302)
T 1f0y_A           43 LVDQTEDILAKSKKGIE   59 (302)
T ss_dssp             EECSCHHHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHHHH
T ss_conf             99898789999999999


No 78 
>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima}
Probab=79.44  E-value=1.9  Score=21.53  Aligned_cols=48  Identities=8%  Similarity=0.079  Sum_probs=32.9

Q ss_pred             HHHHHHHHHCCCC-EEEECCCCCC-----------CCCCCC---C-------CCCCCCCCHHHCCCCCCE
Q ss_conf             3344664201342-0553277532-----------221121---2-------343300584560368622
Q gi|254780300|r  173 ARSDIMLLNTMGA-RIRVIAPITL-----------LPKDIS---N-------MGVEVFHDMQKGLKNVDV  220 (316)
Q Consensus       173 ~~S~~~~~~~~g~-~v~~~~P~~~-----------~~~~~~---~-------~~~~~~~d~~ea~~~aDv  220 (316)
                      .|+...+++.||+ ++.++.|..-           |++...   +       ..+++++++++|+++.+.
T Consensus        31 ihdIARamkn~Gl~~l~lV~P~~~q~~l~~~~~~~W~~~~a~~~a~~a~dvL~~akV~~sLeeAl~d~~~  100 (192)
T 3dcm_X           31 VHDIARTARTYNLKGYYIVTNLRAQQDMVSKMLKFWREGFGSRYNPSRAESLKLVKLKSYLEDVLEDIES  100 (192)
T ss_dssp             HHHHHHHHHHTTCSEEEEECCCHHHHHHHHHHHHHHHTSGGGGTCSSSHHHHTTEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCEEECCHHHHHHHHHH
T ss_conf             7999999986799727996762677888988875077704555088989998218786889999987887


No 79 
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=79.27  E-value=2  Score=21.50  Aligned_cols=17  Identities=29%  Similarity=0.407  Sum_probs=10.0

Q ss_pred             HHHHCCCCEEEECCCCC
Q ss_conf             64201342055327753
Q gi|254780300|r  178 MLLNTMGARIRVIAPIT  194 (316)
Q Consensus       178 ~~~~~~g~~v~~~~P~~  194 (316)
                      .++..+|.++....+++
T Consensus       119 ~l~~~lG~~~~~~~~~~  135 (232)
T 3dfu_A          119 LLVGELGGSIVEIADDK  135 (232)
T ss_dssp             HHHHHTTCEECCCCGGG
T ss_pred             HHHHHHCCEEEECCHHH
T ss_conf             99999399799708888


No 80 
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P)binding protein, rossmann fold; HET: NAP; 2.15A {Streptococcus pyogenes m1 gas} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=79.26  E-value=0.94  Score=23.57  Aligned_cols=16  Identities=0%  Similarity=0.229  Sum_probs=7.6

Q ss_pred             CCCEEEECCCCCHHHHH
Q ss_conf             67146520321005542
Q gi|254780300|r  103 PNIIVIRHPYSGAVNSL  119 (316)
Q Consensus       103 ~d~iv~R~~~~~~~~~~  119 (316)
                      +|++++-.. ...+.+.
T Consensus        61 ~Dvi~Lavk-P~~~~~v   76 (259)
T 2ahr_A           61 VDLVILGIK-PQLFETV   76 (259)
T ss_dssp             CSEEEECSC-GGGHHHH
T ss_pred             CCCEEECCC-CHHHHHH
T ss_conf             763562699-7157877


No 81 
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=78.93  E-value=0.65  Score=24.64  Aligned_cols=98  Identities=15%  Similarity=0.177  Sum_probs=45.9

Q ss_pred             CCCHHHHHHHHCCCCEEEECCCCCHHHHHHCC-------C-CCCCCCCCCCCCCCCHH--HHHHHHHHHHCC-C--CCC-
Q ss_conf             22479998741367146520321005542001-------2-34211112345663122--332222222012-2--210-
Q gi|254780300|r   91 IADTIATLNALRPNIIVIRHPYSGAVNSLMHK-------I-KGPSIINAGDGTHEHPS--QALLDAFAIRHF-K--GKI-  156 (316)
Q Consensus        91 ~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~-------~-s~ppVINag~~~~~HP~--Q~LaDl~Ti~e~-~--g~l-  156 (316)
                      +.++..-+..- +|+|++=.+....+.+....       . ..-.||+..+   .+|.  +.+++.++=+.. +  ..+ 
T Consensus        46 ~~~s~~e~~~~-~d~v~~~l~~~~~~~~v~~~~~~~~~~~~~g~~ivd~sT---~~p~~~~~~~~~~~~~g~~~ldapv~  121 (296)
T 2gf2_A           46 VVSSPADVAEK-ADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSST---IDPAVSKELAKEVEKMGAVFMDAPVS  121 (296)
T ss_dssp             ECSSHHHHHHH-CSEEEECCSSHHHHHHHHHSTTSGGGTCCTTCEEEECSC---CCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred             ECCCHHHHHHC-CCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEECCC---CCHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf             72999999857-996688348846774210354331146999999998998---99999999999999839989963863


Q ss_pred             -------CCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             -------00100103554433013344664201342055327753
Q gi|254780300|r  157 -------SNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       157 -------~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                             .|--..++|.-  ..+.......+..+|-++..++|.+
T Consensus       122 g~~~~a~~g~l~~~~gG~--~~~~~~~~~~l~~~~~~~~~~G~~G  164 (296)
T 2gf2_A          122 GGVGAARSGNLTFMVGGV--EDEFAAAQELLGCMGSNVVYCGAVG  164 (296)
T ss_dssp             SHHHHHHHTCEEEEEESC--GGGHHHHHHHHTTTEEEEEEEESTT
T ss_pred             CCHHHHHCCCEEEEEECC--HHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf             788898539539997176--6269999999998479769979987


No 82 
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, PSI, protein structure initiative; 2.40A {Salmonella typhimurium LT2}
Probab=78.31  E-value=1.8  Score=21.77  Aligned_cols=84  Identities=19%  Similarity=0.340  Sum_probs=43.0

Q ss_pred             CCCEEEECCCCCHHHHHH-------CCC-CCCCCCCCCCCCCCCHHH--HHHHHHHHHCCCC-C-CC-------------
Q ss_conf             671465203210055420-------012-342111123456631223--3222222201222-1-00-------------
Q gi|254780300|r  103 PNIIVIRHPYSGAVNSLM-------HKI-KGPSIINAGDGTHEHPSQ--ALLDAFAIRHFKG-K-IS-------------  157 (316)
Q Consensus       103 ~d~iv~R~~~~~~~~~~a-------~~~-s~ppVINag~~~~~HP~Q--~LaDl~Ti~e~~g-~-l~-------------  157 (316)
                      +|++++-.+....+.+..       ... ..-.||+..  . .+|.+  .++..+   +.+| . ++             
T Consensus        59 ~d~vi~~v~~~~~~~~v~~~~~~~~~~~~~g~iiId~s--T-~~p~~~~~~~~~~---~~~g~~~ldaPVsGg~~~A~~g  132 (295)
T 1yb4_A           59 ADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMS--S-ISPIETKRFAQRV---NEMGADYLDAPVSGGEIGAREG  132 (295)
T ss_dssp             CSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECS--C-CCHHHHHHHHHHH---HTTTEEEEECCEESHHHHHHHT
T ss_pred             CCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCEEEECC--C-CCHHHHHHHHHHH---HHCCCEEEECCCCCCHHHHHHC
T ss_conf             88502216883234342046144554337998899647--8-9866999999999---9729969978987888999749


Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             01001035544330133446642013420553277532
Q gi|254780300|r  158 NLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       158 ~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~  195 (316)
                      .+.+..-||   ..+.......+..++-++..++|.+-
T Consensus       133 ~L~~~~gG~---~~~~~~~~~il~~~~~~~~~~G~~G~  167 (295)
T 1yb4_A          133 TLSIMVGGE---QKVFDRVKPLFDILGKNITLVGGNGD  167 (295)
T ss_dssp             CEEEEEESC---HHHHHHHHHHHHHHEEEEEEEESTTH
T ss_pred             CEEEEEECC---HHHHHHHHHHHHHHCCCEEEECCCCH
T ss_conf             879999479---99999999999986598899889677


No 83 
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain, oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=78.24  E-value=1.7  Score=21.96  Aligned_cols=71  Identities=17%  Similarity=0.215  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCC----CCCCCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf             2128976999960787337899997987613521-1123333210----1333422479998741367146520321005
Q gi|254780300|r   42 TRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHV-ININTKNSAM----KKGENIADTIATLNALRPNIIVIRHPYSGAV  116 (316)
Q Consensus        42 ~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~-i~l~~~~s~~----~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~  116 (316)
                      +.|++|+++.+=+-+--|-   -..-...-|-++ +-+.+.+.++    ..|-.+.+..... .. +|++++=.|+....
T Consensus        12 ~~l~~k~iaviGyGsQG~a---~AlNlrDsG~~V~vglr~~s~s~~~A~~~Gf~v~~~~ea~-~~-adiv~~L~pD~~q~   86 (338)
T 1np3_A           12 SIIQGKKVAIIGYGSQGHA---HACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAV-AA-ADVVMILTPDEFQG   86 (338)
T ss_dssp             HHHHTSCEEEECCSHHHHH---HHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHH-HT-CSEEEECSCHHHHH
T ss_pred             HHHCCCEEEEEEECHHHHH---HHHHHHHCCCCEEEEECCCCHHHHHHHHCCCEECCHHHHH-HH-CCEEEEECCHHHHH
T ss_conf             8878998999766727699---8866685499779997999630999998798431599998-64-88776508877779


Q ss_pred             H
Q ss_conf             5
Q gi|254780300|r  117 N  117 (316)
Q Consensus       117 ~  117 (316)
                      .
T Consensus        87 ~   87 (338)
T 1np3_A           87 R   87 (338)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 84 
>3dzb_A Prephenate dehydrogenase; domain SWAP, PSI2, NYSGXRC, tyrosine biosynthesis, EC:1.3.12.-, structural genomics; 2.46A {Streptococcus thermophilus lmg 18311}
Probab=77.40  E-value=1.3  Score=22.67  Aligned_cols=92  Identities=17%  Similarity=0.177  Sum_probs=44.2

Q ss_pred             CCCEEEECCCCCHH---HHHHCC-CC-CCCCCCCCCCCCCCHHHHHHHHHHHH-------------CCCC-------CCC
Q ss_conf             67146520321005---542001-23-42111123456631223322222220-------------1222-------100
Q gi|254780300|r  103 PNIIVIRHPYSGAV---NSLMHK-IK-GPSIINAGDGTHEHPSQALLDAFAIR-------------HFKG-------KIS  157 (316)
Q Consensus       103 ~d~iv~R~~~~~~~---~~~a~~-~s-~ppVINag~~~~~HP~Q~LaDl~Ti~-------------e~~g-------~l~  157 (316)
                      +|+|++=++-....   .+++.. .+ ..-|+-.+ +....+++++-....=.             |..|       -++
T Consensus        66 ~DlVIla~P~~~~~~vl~~l~~~~~~~~~ivtDv~-SvK~~~~~~~~~~~~~~~~~fV~~HPmaG~e~~G~~~a~~~lf~  144 (317)
T 3dzb_A           66 ADVIILAVPIKQTMAYLKELADLDLKDNVIITDAG-STKREIVEAAERYLTGKNVQFVGSHPMAGSHKSGAIAADVTLFE  144 (317)
T ss_dssp             CSEEECCSCHHHHHHHHHHHTTSCCCTTCEEECCC-SCCHHHHHHHHHHHTTSSCEECEEEECBCC------CCCTTTTT
T ss_pred             CCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEC-CCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHCCCCC
T ss_conf             89899916812667889998755504675998605-65623899999865668851103665546455677676155445


Q ss_pred             CCCEEECCCCCCC-CHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             0100103554433-0133446642013420553277532
Q gi|254780300|r  158 NLHIAICGDILHS-RVARSDIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       158 ~l~ia~vGD~~~~-~v~~S~~~~~~~~g~~v~~~~P~~~  195 (316)
                      |..+..+++...+ ....-.......+|+.+....|++.
T Consensus       145 ~~~~i~~p~~~~~~~~~~~v~~~~~~~G~~~~~~~~~eH  183 (317)
T 3dzb_A          145 NAYYIFTPTSLTKETTIPELKDILSGLKSRYVEIDAAEH  183 (317)
T ss_dssp             TSEEEEECCTTCCTTHHHHHHHHGGGGCCEEEECCHHHH
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHH
T ss_conf             843773378630588999999999980997997480345


No 85 
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substrate-binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=77.25  E-value=3.6  Score=19.83  Aligned_cols=92  Identities=12%  Similarity=0.126  Sum_probs=55.3

Q ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHH
Q ss_conf             00010010355443301334466420134205532775322211212343300584560368622100011331233344
Q gi|254780300|r  156 ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSL  235 (316)
Q Consensus       156 l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~  235 (316)
                      +.+.++..+|   .++........+..+|+.+....|..-.+..... ......++++.+..+|+|+..-=..       
T Consensus       153 l~~~~~Gi~g---~g~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~sDivv~~lplt-------  221 (330)
T 2gcg_A          153 LTQSTVGIIG---LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE-FQAEFVSTPELAAQSDFIVVACSLT-------  221 (330)
T ss_dssp             CTTCEEEEEC---CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT-TTCEECCHHHHHHHCSEEEECCCCC-------
T ss_pred             EEEEEEEEEE---CCCHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH-HHCCCCCHHHHHCCCCEEEECCCCC-------
T ss_conf             1210599980---1301134553202346403554114684455443-2000020466613577899714688-------


Q ss_pred             HHHHHHHCCCCCCCHHHHHHCCCCCEEEC
Q ss_conf             44555420235758899983799859955
Q gi|254780300|r  236 IPSIREYKHVYSLDEKKLKYAKKDALVMH  264 (316)
Q Consensus       236 ~~~~~~~~~~~~v~~~~l~~a~~~ai~mH  264 (316)
                          .+..  .-++.+.++.+|++++|--
T Consensus       222 ----~~T~--~li~~~~l~~mk~ga~lIN  244 (330)
T 2gcg_A          222 ----PATE--GLCNKDFFQKMKETAVFIN  244 (330)
T ss_dssp             ----TTTT--TCBSHHHHHHSCTTCEEEE
T ss_pred             ----CCHH--HHHHHHHHHHCCCCCEEEE
T ss_conf             ----6526--6740999985689966999


No 86 
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=76.71  E-value=2.3  Score=21.10  Aligned_cols=10  Identities=30%  Similarity=0.544  Sum_probs=3.9

Q ss_pred             CHHHHHHHHH
Q ss_conf             1223322222
Q gi|254780300|r  138 HPSQALLDAF  147 (316)
Q Consensus       138 HP~Q~LaDl~  147 (316)
                      -|-|.-.|++
T Consensus        87 k~g~~R~dll   96 (316)
T 1ldn_A           87 KPGETRLDLV   96 (316)
T ss_dssp             CTTTCSGGGH
T ss_pred             CCCCCHHHHH
T ss_conf             9898868998


No 87 
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=75.85  E-value=3.9  Score=19.59  Aligned_cols=191  Identities=15%  Similarity=0.138  Sum_probs=99.3

Q ss_pred             CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHH-HHHHHHHCCCCCC--CCCCCCC
Q ss_conf             417822389999999999999999644204877521289769999607873378999-9798761352111--2333321
Q gi|254780300|r    8 NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSF-EVAGKLLGVHVIN--INTKNSA   84 (316)
Q Consensus         8 ~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SF-e~A~~~LGg~~i~--l~~~~s~   84 (316)
                      .+|+-+.+..+=.+.|-+...+++++..  +..    ++-.+.++=..|+.++.+.- ..++.++|..+..  |+.+.++
T Consensus         5 ~ildGk~iA~~i~~~ik~~v~~l~~~~~--g~~----P~LavIlvg~d~aS~~Yv~~K~k~~~~~GI~~~~~~l~~~~~e   78 (301)
T 1a4i_A            5 EILNGKEISAQIRARLKNQVTQLKEQVP--GFT----PRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTE   78 (301)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHHHHHHST--TCC----CEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCH
T ss_pred             EEEEHHHHHHHHHHHHHHHHHHHHHHCC--CCC----CEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
T ss_conf             7604599999999999999999998558--999----6389999699765799999999999985995999977764339


Q ss_pred             CCCCCCCCCHHHHHHHHC-CCCEEEECCC--CCH-----HHHHHCCCCCC---CCCCC-----CC-CCCCCHHHHHHHHH
Q ss_conf             013334224799987413-6714652032--100-----55420012342---11112-----34-56631223322222
Q gi|254780300|r   85 MKKGENIADTIATLNALR-PNIIVIRHPY--SGA-----VNSLMHKIKGP---SIINA-----GD-GTHEHPSQALLDAF  147 (316)
Q Consensus        85 ~~kgEs~~Dta~vls~~~-~d~iv~R~~~--~~~-----~~~~a~~~s~p---pVINa-----g~-~~~~HP~Q~LaDl~  147 (316)
                          |.+.+.+.-++.-- ++.|++-.+.  +..     +.........+   .-.|.     |+ .+.--||-++|=+-
T Consensus        79 ----~el~~~I~~lN~d~~v~GIiVqlPlP~~~~~d~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~~PcTp~av~~  154 (301)
T 1a4i_A           79 ----SEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLE  154 (301)
T ss_dssp             ----HHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHH
T ss_pred             ----HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf             ----9999999987157752204664148887885989998557966675655630466876088777756656699999


Q ss_pred             HHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             22012221000100103554433013344664201342055327753222112123433005845603686221000
Q gi|254780300|r  148 AIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       148 Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      -+.+..-+++|.+++.+|..  .-|.+-+..++..-|+.|++|.-.              +.++.+..++||+++..
T Consensus       155 lL~~y~i~l~GK~vvViGrS--~iVG~Pla~ll~~~~atVt~~hs~--------------t~~l~~~~~~ADIvisa  215 (301)
T 1a4i_A          155 LIKETGVPIAGRHAVVVGRS--KIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVA  215 (301)
T ss_dssp             HHHTTTCCCTTCEEEEECCC--TTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEEC
T ss_pred             HHHHHCCCCCCCEEEEEEEC--CCCCHHHHHHHHCCCCEEEEEECC--------------CCHHHHHCCCCCEEEEC
T ss_conf             99985988247457997304--544478999975279769998589--------------85004304457788613


No 88 
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=75.48  E-value=2.8  Score=20.53  Aligned_cols=15  Identities=27%  Similarity=0.306  Sum_probs=7.0

Q ss_pred             EEECCCCHHHHHHHH
Q ss_conf             960787337899997
Q gi|254780300|r   52 LFLETSTRTQTSFEV   66 (316)
Q Consensus        52 lF~kpStRTR~SFe~   66 (316)
                      ++.-||..+|--++.
T Consensus        90 i~avps~~~~~~l~~  104 (366)
T 1evy_A           90 LFVIPTQFLRGFFEK  104 (366)
T ss_dssp             EECCCHHHHHHHHHH
T ss_pred             HHCCCHHHHHHHHHH
T ss_conf             023769999999998


No 89 
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=73.78  E-value=4.4  Score=19.26  Aligned_cols=21  Identities=14%  Similarity=0.243  Sum_probs=12.6

Q ss_pred             CHHHCCHHHHHHHHHHHHHHH
Q ss_conf             822389999999999999999
Q gi|254780300|r   11 TVKDLSMQDVNYLLDRANEYF   31 (316)
Q Consensus        11 ~~~dl~~~el~~ll~~A~~~k   31 (316)
                      .+-|.+++.++...+...+..
T Consensus        32 ~l~D~~~~~l~~~~~~i~~~l   52 (483)
T 3mog_A           32 LLYDISAEALTRAIDGIHARL   52 (483)
T ss_dssp             EEECSCHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHHHHHHH
T ss_conf             999799999999999999999


No 90 
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=73.76  E-value=1.8  Score=21.79  Aligned_cols=21  Identities=10%  Similarity=0.338  Sum_probs=11.0

Q ss_pred             CCHHHHHHHHCCCCEEEECCCCC
Q ss_conf             24799987413671465203210
Q gi|254780300|r   92 ADTIATLNALRPNIIVIRHPYSG  114 (316)
Q Consensus        92 ~Dta~vls~~~~d~iv~R~~~~~  114 (316)
                      .|-...+..  +|++++-.+...
T Consensus        74 ~d~~eal~~--aDvVivavka~~   94 (404)
T 3c7a_A           74 KDPEIAISG--ADVVILTVPAFA   94 (404)
T ss_dssp             SCHHHHHTT--CSEEEECSCGGG
T ss_pred             CCHHHHHCC--CCEEEEECCHHH
T ss_conf             799999626--967998066899


No 91 
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=72.87  E-value=3.9  Score=19.56  Aligned_cols=137  Identities=12%  Similarity=0.171  Sum_probs=65.7

Q ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHHC---CCCCC---CCCCCCEEEEEEECCCCHHHH--HHHHHHHHHC------CCC
Q ss_conf             782238999999999999999964420---48775---212897699996078733789--9997987613------521
Q gi|254780300|r   10 VTVKDLSMQDVNYLLDRANEYFQKKSH---FNPST---TRLQGLTQINLFLETSTRTQT--SFEVAGKLLG------VHV   75 (316)
Q Consensus        10 L~~~dl~~~el~~ll~~A~~~k~~~~~---~~~~~---~~L~gk~~~~lF~kpStRTR~--SFe~A~~~LG------g~~   75 (316)
                      |.+-|.+.+-++..-..+..+.+....   ....+   ..|.|...+..=.........  -++. -.+.|      |..
T Consensus        35 i~L~Did~~rl~~~~~~~~~~~~~~~~~~~i~~ttd~~~al~~adfVi~t~~vgg~~~~~~~~~i-~ek~gl~~~~~gqe  113 (480)
T 1obb_A           35 VTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQI-GEKYGYYRGIDAQE  113 (480)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHH-HHHTTCTTCTTCBT
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEEEEEEECCCCCCCHHHHHH-HHHCCHHCCCCCCC
T ss_conf             99986987799999999999998729982899968899984799999983432886410355643-33306102768752


Q ss_pred             CCC-CCCCC--CCCCCCCCCCHHHHHHHHCCCCEEEECCCCC-HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             112-33332--1013334224799987413671465203210-05542001234211112345663122332222222
Q gi|254780300|r   76 INI-NTKNS--AMKKGENIADTIATLNALRPNIIVIRHPYSG-AVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAI  149 (316)
Q Consensus        76 i~l-~~~~s--~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~-~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti  149 (316)
                      ... ++...  .+..--.+.|.++-+..+.+|++++-....- .+..+....+..++|+.|++.. . ++-++..+=+
T Consensus       114 ~~~~G~gg~~~alrtipv~~~i~~~i~~~~P~A~iin~tNP~~ivt~a~~~~~~~~~iGlC~~p~-~-~~~la~~Lgv  189 (480)
T 1obb_A          114 FNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVPIKAVGFCHGHY-G-VMEIVEKLGL  189 (480)
T ss_dssp             TBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHHHHHSCSEEEEECSGGG-H-HHHHHHHTTC
T ss_pred             CCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCH-H-HHHHHHHHCC
T ss_conf             57877326663133589999999999986998499995681699999986436652898579831-5-8999999499


No 92 
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, cytoplasm, oxidoreductase, phospholipid biosynthesis, structural genomics; HET: EPE; 2.10A {Coxiella burnetii rsa 493}
Probab=72.32  E-value=4.1  Score=19.43  Aligned_cols=111  Identities=16%  Similarity=0.126  Sum_probs=44.4

Q ss_pred             HHHHHHCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH---HCCCC-CCCCCCCCCCCCCCH
Q ss_conf             79876135211123333--2101333422479998741367146520321005542---00123-421111234566312
Q gi|254780300|r   66 VAGKLLGVHVININTKN--SAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSL---MHKIK-GPSIINAGDGTHEHP  139 (316)
Q Consensus        66 ~A~~~LGg~~i~l~~~~--s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~---a~~~s-~ppVINag~~~~~HP  139 (316)
                      -.++.-|-+..+|..-.  ..+.   ...|....+..  +|+|++-.+.......+   ..... ..++|.+.-|. +++
T Consensus        66 ~~I~~~~~n~~ylp~i~l~~~I~---at~dl~e~l~~--ad~Iiiavps~~~~~~l~~i~~~~~~~~~ii~~~kG~-~~~  139 (356)
T 3k96_A           66 DEMQAEGVNNRYLPNYPFPETLK---AYCDLKASLEG--VTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGL-AKG  139 (356)
T ss_dssp             HHHHHHSSBTTTBTTCCCCTTEE---EESCHHHHHTT--CCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSC-BTT
T ss_pred             HHHHHCCCCCCCCCCCCCCCCEE---EECCHHHHHHC--CCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCC-CCC
T ss_conf             99997398977799895998758---97678999617--8638995561999999997323135553011101234-677


Q ss_pred             HHHHHHHHHHHCCCCCCCCCC-EEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             233222222201222100010-0103554433013344664201342055327753
Q gi|254780300|r  140 SQALLDAFAIRHFKGKISNLH-IAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       140 ~Q~LaDl~Ti~e~~g~l~~l~-ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                      +..+.+++  .+..+.   .. .++.|..    .+.   +.+...+..++++++..
T Consensus       140 ~~~~~~~~--~~~~~~---~~~~vlsGPs----~A~---Ev~~~~~t~~~ias~~~  183 (356)
T 3k96_A          140 SRLLHEVV--ATELGQ---VPMAVISGPS----LAT---EVAANLPTAVSLASNNS  183 (356)
T ss_dssp             TBCHHHHH--HHHHCS---CCEEEEESSC----CHH---HHHTTCCEEEEEEESCH
T ss_pred             CCCCCHHH--HHHCCC---CCEEEEECCC----HHH---HHHCCCCCEEEEECCHH
T ss_conf             76510146--565799---8548983574----055---55417981589715348


No 93 
>1vjt_A Alpha-glucosidase; TM0752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics, hydrolase; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=72.31  E-value=2.2  Score=21.25  Aligned_cols=135  Identities=11%  Similarity=0.126  Sum_probs=68.5

Q ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHHCCC---CCC---CCCCCCEEEEE-EECCCCHHHHHHHHHH-------HHHCCCC
Q ss_conf             78223899999999999999996442048---775---21289769999-6078733789999798-------7613521
Q gi|254780300|r   10 VTVKDLSMQDVNYLLDRANEYFQKKSHFN---PST---TRLQGLTQINL-FLETSTRTQTSFEVAG-------KLLGVHV   75 (316)
Q Consensus        10 L~~~dl~~~el~~ll~~A~~~k~~~~~~~---~~~---~~L~gk~~~~l-F~kpStRTR~SFe~A~-------~~LGg~~   75 (316)
                      |.+-|.+.+-++.+-.+|..+.+.....-   ..+   ..|.|...+.. +.....|-+..-..+.       .+.|.. 
T Consensus        46 l~L~Did~~rL~~~~~l~~~~~~~~~~~~~v~~Ttdr~eAl~gADfVi~~i~~~~~Rvg~~~~r~~ded~~Ip~K~gl~-  124 (483)
T 1vjt_A           46 IYMMDVHERRLNASYILARKYVEELNSPVKIVKTSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYY-  124 (483)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCT-
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCHHHCCC-
T ss_conf             9996899899999999999999961989089997899999769999998031055654676643333123243121500-


Q ss_pred             CCCCCC-C---CCCCCC-CC------CCCHHHHHHHHCCCCEEEECCCCC-HHHHHHCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             112333-3---210133-34------224799987413671465203210-05542001234211112345663122332
Q gi|254780300|r   76 ININTK-N---SAMKKG-EN------IADTIATLNALRPNIIVIRHPYSG-AVNSLMHKIKGPSIINAGDGTHEHPSQAL  143 (316)
Q Consensus        76 i~l~~~-~---s~~~kg-Es------~~Dta~vls~~~~d~iv~R~~~~~-~~~~~a~~~s~ppVINag~~~~~HP~Q~L  143 (316)
                      ..+..+ +   ..+.+. -+      +-|.++.+..+.+|++++=..... .+.+....++...+|+.|++.. . ++-+
T Consensus       125 ~gv~gQet~G~GG~~~alRtip~ipv~leia~di~e~~P~AwliNyTNP~~ivt~Av~~~~~~k~vGLC~~~~-~-~~~~  202 (483)
T 1vjt_A          125 RGIDSQELNMVSTYTYVLSSYPDMKLALEIAEKMKKMAPKAYLMQTANPVFEITQAVRRWTGANIVGFCHGVA-G-VYEV  202 (483)
T ss_dssp             TCTTCBTTBCCTTSCSTTTCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHHHHHSCCCEEECCCGGG-G-HHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCHH-H-HHHH
T ss_conf             2545652678765513102563029999999999976998089980788899999998526998899689727-7-9999


Q ss_pred             HHHH
Q ss_conf             2222
Q gi|254780300|r  144 LDAF  147 (316)
Q Consensus       144 aDl~  147 (316)
                      +..+
T Consensus       203 ~~~l  206 (483)
T 1vjt_A          203 FEKL  206 (483)
T ss_dssp             HHHT
T ss_pred             HHHC
T ss_conf             9981


No 94 
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=71.68  E-value=3  Score=20.29  Aligned_cols=58  Identities=19%  Similarity=0.232  Sum_probs=35.5

Q ss_pred             CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEE
Q ss_conf             5443301334466420134205532775322211212343300584560368622100011
Q gi|254780300|r  166 DILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRM  226 (316)
Q Consensus       166 D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~  226 (316)
                      |+++| .+..++..+...|+++.+.-|--  .+..........++++++.+++|+|.....
T Consensus       325 d~R~S-ps~~li~~L~~~g~~V~~~DP~v--~~~~~~~~~~~~~~~~~~~~~~d~iv~~~~  382 (402)
T 1dlj_A          325 NFRES-AIKDVIDILKSKDIKIIIYEPML--NKLESEDQSVLVNDLENFKKQANIIVTNRY  382 (402)
T ss_dssp             CCTTC-HHHHHHHHHHTSSCEEEEECTTC--SCCCTTCCSEECCCHHHHHHHCSEEECSSC
T ss_pred             CEECC-CHHHHHHHHHHCCCEEEEECCCC--CHHHHCCCCEEECCHHHHHHCCCEEEECCC
T ss_conf             72368-29999999997899899999989--803522673781789999708959998687


No 95 
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=70.99  E-value=2.2  Score=21.14  Aligned_cols=98  Identities=14%  Similarity=0.106  Sum_probs=45.6

Q ss_pred             CCHHHHHHHHCCCCEEEECCCCCHHHHHHC-------C-CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---------C
Q ss_conf             247999874136714652032100554200-------1-2342111123456631223322222220122---------2
Q gi|254780300|r   92 ADTIATLNALRPNIIVIRHPYSGAVNSLMH-------K-IKGPSIINAGDGTHEHPSQALLDAFAIRHFK---------G  154 (316)
Q Consensus        92 ~Dta~vls~~~~d~iv~R~~~~~~~~~~a~-------~-~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~---------g  154 (316)
                      .++..-+..- +|++++--+....+.+...       . ...-.+|+..  . ..|.++..=.-.+.++.         |
T Consensus        68 ~~s~~e~~~~-~d~vi~~l~~~~a~~~v~~~~~~~~~~~~~g~iiid~s--T-~~p~~~~~~~~~~~~~g~~~ldaPVsG  143 (310)
T 3doj_A           68 CESPAEVIKK-CKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMS--T-VDAETSLKINEAITGKGGRFVEGPVSG  143 (310)
T ss_dssp             CSSHHHHHHH-CSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS--C-CCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             CCCHHHHHHC-CCCEEEECCCCCCEEEEECCCHHHHHHCCCCCEEEECC--C-CCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             2899999845-88449840575302563013201554235898899568--7-637778999999984497699633778


Q ss_pred             C----CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             1----0001001035544330133446642013420553277532
Q gi|254780300|r  155 K----ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       155 ~----l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~  195 (316)
                      .    .+|.-..++|.  .-.+.......+..++-++..++|.+-
T Consensus       144 g~~~A~~G~l~~~vgG--~~~~~~~~~~il~~~~~~i~~~G~~G~  186 (310)
T 3doj_A          144 SKKPAEDGQLIILAAG--DKALFEESIPAFDVLGKRSFYLGQVGN  186 (310)
T ss_dssp             CHHHHHHTCEEEEEEE--CHHHHHHHHHHHHHHEEEEEECSSTTH
T ss_pred             CHHHHHCCCCEEECCC--CHHHHHHHHHHHHHHCCCEEEECCCCH
T ss_conf             8688856982200479--879999870587851697799799748


No 96 
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=70.30  E-value=5.2  Score=18.75  Aligned_cols=170  Identities=12%  Similarity=0.135  Sum_probs=95.0

Q ss_pred             EEEECCC--CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCC---
Q ss_conf             9960787--33789999798761352111233332101333422479998741367146520321005542001234---
Q gi|254780300|r   51 NLFLETS--TRTQTSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKG---  125 (316)
Q Consensus        51 ~lF~kpS--tRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~---  125 (316)
                      -++=.|=  .++-.=+..+..++|....|.--+-    ..|.+++....+.......+.+--|+...+..+....+.   
T Consensus        16 gviG~pI~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~l~~~A~   91 (275)
T 2hk9_A           16 GVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEI----NPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAK   91 (275)
T ss_dssp             EEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEEC----CGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSEECHHHH
T ss_pred             EEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC----CHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCHHHH
T ss_conf             9989976303179999999998699928999877----889999999987507988699757061768654155406667


Q ss_pred             -----CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCC-CC
Q ss_conf             -----211112345663122332222222012221000100103554433013344664201342055327753222-11
Q gi|254780300|r  126 -----PSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLP-KD  199 (316)
Q Consensus       126 -----ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~-~~  199 (316)
                           --|++-......+-|-...=+..+++...++++.++..+|-   +-++++.+.++...|.++.++.-..-.. ..
T Consensus        92 ~iGAvNTi~~~~g~l~G~NTD~~G~~~~l~~~~~~~~~~~vlilGa---GGaarai~~aL~~~g~~i~~~~r~~~~~~~~  168 (275)
T 2hk9_A           92 EIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGA---GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             HHTCCCEEEEETTEEEEECCHHHHHHHHHHHHCTTGGGSEEEEECC---SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             HHCCCCEEEECCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECC---HHHHHHHHHHHHHCCCEEEEECCCHHHHHHH
T ss_conf             6254003894399164245754644302220276767774788455---0778999999997599798533758999999


Q ss_pred             CCCCCCCCCCCHHHCCCCCCEEE-EEEEC
Q ss_conf             21234330058456036862210-00113
Q gi|254780300|r  200 ISNMGVEVFHDMQKGLKNVDVIM-ILRMQ  227 (316)
Q Consensus       200 ~~~~~~~~~~d~~ea~~~aDvv~-~~~~~  227 (316)
                      .............+...++|+|+ +++.+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~dliINaTp~G  197 (275)
T 2hk9_A          169 AQKFPLEVVNSPEEVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             TTTSCEEECSCGGGTGGGCSEEEECSSTT
T ss_pred             HHHCCCCHHHHHHHHCCCCCEEEECCCCC
T ss_conf             98668411123443114112664035677


No 97 
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=68.95  E-value=1.7  Score=21.93  Aligned_cols=15  Identities=7%  Similarity=-0.006  Sum_probs=6.9

Q ss_pred             CCCEEEECCCCCHHH
Q ss_conf             671465203210055
Q gi|254780300|r  103 PNIIVIRHPYSGAVN  117 (316)
Q Consensus       103 ~d~iv~R~~~~~~~~  117 (316)
                      +|+++.-.+....+.
T Consensus        57 advii~~v~~~~a~~   71 (264)
T 1i36_A           57 CPVVISAVTPGVALG   71 (264)
T ss_dssp             SSEEEECSCGGGHHH
T ss_pred             CCCEEEEECCCHHHH
T ss_conf             580799833631588


No 98 
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=67.90  E-value=2.7  Score=20.61  Aligned_cols=39  Identities=15%  Similarity=0.176  Sum_probs=18.6

Q ss_pred             CCCEEEECCCCCHHHHHHC-------C-CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             6714652032100554200-------1-2342111123456631223322
Q gi|254780300|r  103 PNIIVIRHPYSGAVNSLMH-------K-IKGPSIINAGDGTHEHPSQALL  144 (316)
Q Consensus       103 ~d~iv~R~~~~~~~~~~a~-------~-~s~ppVINag~~~~~HP~Q~La  144 (316)
                      +|++++-.++...+.+...       . .....||+.  +. ..|.++..
T Consensus        65 ~diii~~v~~~~~~~~v~~~~~~~~~~~~~g~iiid~--sT-~~p~~~~~  111 (303)
T 3g0o_A           65 VDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVS--ST-ISSADAQE  111 (303)
T ss_dssp             CSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEEC--SC-CCHHHHHH
T ss_pred             CCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEC--CC-CCHHHHHH
T ss_conf             8946888622022200024543310014676323305--77-88788899


No 99 
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=66.39  E-value=1.7  Score=21.96  Aligned_cols=68  Identities=16%  Similarity=0.139  Sum_probs=45.4

Q ss_pred             CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCC-CC--CCCCCCCCCHHHCCCCCCEEEEEE
Q ss_conf             100010010355443301334466420134205532775322211-21--234330058456036862210001
Q gi|254780300|r  155 KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKD-IS--NMGVEVFHDMQKGLKNVDVIMILR  225 (316)
Q Consensus       155 ~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~-~~--~~~~~~~~d~~ea~~~aDvv~~~~  225 (316)
                      ...+.+++.+|-   +.++...+..+..-|.+++++....-..+. ..  +.....+.++.+++.++|+|++..
T Consensus        18 ~~~~kkilvIGa---G~~~~~~a~~L~~~~~~v~v~nRt~~ka~~la~~~~~~~~~~~~l~~~l~~~DiVi~aT   88 (144)
T 3oj0_A           18 KNGGNKILLVGN---GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITAT   88 (144)
T ss_dssp             HHCCCEEEEECC---SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECS
T ss_pred             HCCCCEEEEECC---HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf             639999999997---89999999999856984689819999999998750522022420899997679899923


No 100
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=65.34  E-value=4.9  Score=18.92  Aligned_cols=88  Identities=13%  Similarity=0.196  Sum_probs=39.5

Q ss_pred             HHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHCCCCCCCCCCEEE--CCCCC-C
Q ss_conf             999874136714652032100554200123421111234566--312233222222201222100010010--35544-3
Q gi|254780300|r   95 IATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTH--EHPSQALLDAFAIRHFKGKISNLHIAI--CGDIL-H  169 (316)
Q Consensus        95 a~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~--~HP~Q~LaDl~Ti~e~~g~l~~l~ia~--vGD~~-~  169 (316)
                      .+.|. - +|+++........+..+...  ...++.++....  ..+.+...+.+  .+.  --+|.+|++  .||.. +
T Consensus       236 ~~~L~-~-advv~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l--~~~--~~~G~~Va~l~~GDP~~y  307 (457)
T 1pjq_A          236 LQQIQ-Q-ADIVVYDRLVSDDIMNLVRR--DADRVFVGKRAGYHCVPQEEINQIL--LRE--AQKGKRVVRLKGGDPFIF  307 (457)
T ss_dssp             HHHHH-H-CSEEEECTTSCHHHHTTSCT--TSEEEECSCC---CCCTTHHHHHHH--HHH--HHTTCEEEEEESBCTTTS
T ss_pred             HHHHH-H-CCEEEECCCCCHHHHHHCCC--CCEEEECCCCCCCCCCHHHHHHHHH--HHH--HHCCCEEEEEECCCCCCC
T ss_conf             99998-6-99999868763778865234--5437730355554420078999999--999--974985999906886441


Q ss_pred             CCHHHHHHHHHHCCCCEEEECC
Q ss_conf             3013344664201342055327
Q gi|254780300|r  170 SRVARSDIMLLNTMGARIRVIA  191 (316)
Q Consensus       170 ~~v~~S~~~~~~~~g~~v~~~~  191 (316)
                      + ....++..+...|+++.++.
T Consensus       308 s-~~~~~~~~~~~~~i~veVVP  328 (457)
T 1pjq_A          308 G-RGGEELETLCHAGIPFSVVP  328 (457)
T ss_dssp             S-SHHHHHTTTTTTTCCEEEEC
T ss_pred             H-HHHHHHHHHHHCCEEEEECC
T ss_conf             6-69999998763783699748


No 101
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber dsm 13855}
Probab=65.14  E-value=6.3  Score=18.22  Aligned_cols=20  Identities=10%  Similarity=-0.071  Sum_probs=9.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             68687756999999999997
Q gi|254780300|r  286 IQYQVEMGVAVRMAIIKELL  305 (316)
Q Consensus       286 v~~Qa~Nrl~~~~AlL~~~l  305 (316)
                      -++++...+......++.+.
T Consensus       289 ~l~~s~~~l~~~i~~~~~l~  308 (314)
T 3nep_X          289 QLKTSAGHVHSNLDDLQRLR  308 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999887


No 102
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=64.34  E-value=6.8  Score=17.99  Aligned_cols=10  Identities=10%  Similarity=0.162  Sum_probs=4.6

Q ss_pred             CCCEEECCCC
Q ss_conf             0100103554
Q gi|254780300|r  158 NLHIAICGDI  167 (316)
Q Consensus       158 ~l~ia~vGD~  167 (316)
                      |.....++|.
T Consensus       223 gK~pVvv~d~  232 (460)
T 3k6j_A          223 KKLPVLVGNC  232 (460)
T ss_dssp             TCEEEEESSC
T ss_pred             CCEEEEECCC
T ss_conf             8805883466


No 103
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=63.47  E-value=2.6  Score=20.70  Aligned_cols=67  Identities=19%  Similarity=0.369  Sum_probs=37.9

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC-CC------CCHHH-CCCCCCEEEE
Q ss_conf             21000100103554433013344664201342055327753222112123433-00------58456-0368622100
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVE-VF------HDMQK-GLKNVDVIMI  223 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~------~d~~e-a~~~aDvv~~  223 (316)
                      |..++.++..+|   .+++..+....+...|.++.++-+..-.-+.....+.. ++      ..+++ .++++|+++.
T Consensus         2 ~~~~~~~~iIiG---~G~~G~~la~~L~~~g~~vvviD~d~~~~~~~~~~g~~~v~gD~td~~~L~~a~i~~a~~vii   76 (144)
T 2hmt_A            2 GRIKNKQFAVIG---LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIV   76 (144)
T ss_dssp             ----CCSEEEEC---CSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred             CCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEE
T ss_conf             876578399988---789999999999988991999979679999998539749993178888886302234999999


No 104
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=63.09  E-value=3.6  Score=19.77  Aligned_cols=46  Identities=11%  Similarity=-0.000  Sum_probs=20.3

Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf             987613521112333321013334224799987413671465203210
Q gi|254780300|r   67 AGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSG  114 (316)
Q Consensus        67 A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~  114 (316)
                      +++.-|.+..+.........-.....|-...+..  .|++++-.+...
T Consensus        42 ~l~~~g~~~~~~~~~~~~~~~~~~t~d~~~~~~~--aD~viv~vks~~   87 (359)
T 1bg6_A           42 EIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD--ADVILIVVPAIH   87 (359)
T ss_dssp             HHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT--CSEEEECSCGGG
T ss_pred             HHHHCCCCCCCCCCHHHHHCCCEEECCHHHHHHC--CCEEEEEECCHH
T ss_conf             9995899866687445320244343899999705--988999736702


No 105
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=62.63  E-value=3  Score=20.35  Aligned_cols=25  Identities=12%  Similarity=0.093  Sum_probs=10.9

Q ss_pred             CCHHHHHHHHHHH-HCCCCCCCCCCE
Q ss_conf             3122332222222-012221000100
Q gi|254780300|r  137 EHPSQALLDAFAI-RHFKGKISNLHI  161 (316)
Q Consensus       137 ~HP~Q~LaDl~Ti-~e~~g~l~~l~i  161 (316)
                      .-|+-+++-+++. ..+.+.++.-+|
T Consensus       125 tNPvD~~t~~a~~~~k~~~~~p~~ri  150 (326)
T 1smk_A          125 SNPVNSTVPIAAEVFKKAGTYDPKRL  150 (326)
T ss_dssp             CSSHHHHHHHHHHHHHHHTCCCTTSE
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCHHHE
T ss_conf             38613789999999987699983517


No 106
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=61.36  E-value=7.6  Score=17.69  Aligned_cols=25  Identities=16%  Similarity=0.106  Sum_probs=11.1

Q ss_pred             CCHHHHHHHHHHH-HCCCCCCCCCCE
Q ss_conf             3122332222222-012221000100
Q gi|254780300|r  137 EHPSQALLDAFAI-RHFKGKISNLHI  161 (316)
Q Consensus       137 ~HP~Q~LaDl~Ti-~e~~g~l~~l~i  161 (316)
                      +.|+-+++-+.+- ..+.|.+...+|
T Consensus       117 sNPvD~~~~i~~~~~k~~g~~~~~~i  142 (314)
T 1mld_A          117 SNPVNSTIPITAEVFKKHGVYNPNKI  142 (314)
T ss_dssp             SSCHHHHHHHHHHHHHHTTCCCTTSE
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCEE
T ss_conf             48630368999999987568851446


No 107
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=61.02  E-value=4.6  Score=19.09  Aligned_cols=46  Identities=11%  Similarity=0.111  Sum_probs=18.6

Q ss_pred             EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             699996078733789999798761352111233332101333422479
Q gi|254780300|r   48 TQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAMKKGENIADTI   95 (316)
Q Consensus        48 ~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta   95 (316)
                      .++.+.--|++  +.....++.+-|-|++.--|-...+...+.+.+.+
T Consensus        67 D~V~i~tp~~~--h~~~~~~al~~gkhv~~EKP~a~~~~e~~~l~~~~  112 (359)
T 3e18_A           67 DAVLIATPNDS--HKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVA  112 (359)
T ss_dssp             CEEEECSCGGG--HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHH
T ss_pred             CEEEECCCCHH--HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf             98998788055--23567888853981999578642087887889999


No 108
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by light; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=60.68  E-value=8  Score=17.57  Aligned_cols=27  Identities=11%  Similarity=0.062  Sum_probs=14.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             868775699999999999778142220
Q gi|254780300|r  287 QYQVEMGVAVRMAIIKELLENQNKITQ  313 (316)
Q Consensus       287 ~~Qa~Nrl~~~~AlL~~~l~~~~~~~~  313 (316)
                      ++++..-|-..+.....+++-+....+
T Consensus       338 l~~s~~eL~~E~~~v~~L~~e~~~~~~  364 (375)
T 7mdh_A          338 IKKSEAELLAEKKCVAHLTGEGNAYCD  364 (375)
T ss_dssp             HHHHHHHHHHHHHHTHHHHTSSSCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             999999999999999997634234378


No 109
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99.5) (CM) and prephenate dehydrogenase...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=60.26  E-value=7.7  Score=17.66  Aligned_cols=126  Identities=10%  Similarity=0.144  Sum_probs=61.9

Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHH---HHHCCCC-CCCCCCCCC
Q ss_conf             337899997987613521112333321013334224799987413671465203210055---4200123-421111234
Q gi|254780300|r   58 TRTQTSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVN---SLMHKIK-GPSIINAGD  133 (316)
Q Consensus        58 tRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~---~~a~~~s-~ppVINag~  133 (316)
                      -+==-||..+..+-|-.+...|.+..      +..  ...+.  .+|+|++-+|-.....   +++...+ .--|+-.+ 
T Consensus        31 G~mG~sla~~l~~~G~~V~~~d~~~~------~~~--~~~~~--~aD~VilavP~~~~~~~l~~~~~~l~~~~iv~Dv~-   99 (298)
T 2pv7_A           31 GKLGGLFARYLRASGYPISILDREDW------AVA--ESILA--NADVVIVSVPINLTLETIERLKPYLTENMLLADLT-   99 (298)
T ss_dssp             SHHHHHHHHHHHTTTCCEEEECTTCG------GGH--HHHHT--TCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECC-
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCH------HHH--HHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEC-
T ss_conf             86789999999968995999749804------328--99875--99999990969999787898755248885697404-


Q ss_pred             CCCCCHHHHHHHHHHHHC-----CCC----CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             566312233222222201-----222----10001001035544330133446642013420553277532
Q gi|254780300|r  134 GTHEHPSQALLDAFAIRH-----FKG----KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       134 ~~~~HP~Q~LaDl~Ti~e-----~~g----~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~  195 (316)
                      +....|++.+.......-     -+|    .+++-.++.+.. .......-+..++..+|+++....|++.
T Consensus       100 SvK~~i~~~~~~~~~~~fi~~HPmaG~e~~g~~~~~v~~~~~-~~~~~~~~v~~l~~~~Ga~v~~~~~eeH  169 (298)
T 2pv7_A          100 SVKREPLAKMLEVHTGAVLGLHPMFGADIASMAKQVVVRCDG-RFPERYEWLLEQIQIWGAKIYQTNATEH  169 (298)
T ss_dssp             SCCHHHHHHHHHHCSSEEEEEEECSCTTCSCCTTCEEEEEEE-ECGGGTHHHHHHHHHTTCEEEECCHHHH
T ss_pred             CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCC-CCHHHHHHHHHHHHHCCCCEEEECHHHH
T ss_conf             412689999987456887632776565556776148995699-9748999999999982992799558889


No 110
>1yrl_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, knotted protein, oxidoreductase; 2.60A {Escherichia coli}
Probab=60.16  E-value=3.3  Score=20.02  Aligned_cols=77  Identities=10%  Similarity=0.164  Sum_probs=36.3

Q ss_pred             HHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCC-CCCCC-----CCCCCC----CCCCCCHHHHHHHHCC
Q ss_conf             4204877521289769999607873378999979876135211-12333-----321013----3342247999874136
Q gi|254780300|r   34 KSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAGKLLGVHVI-NINTK-----NSAMKK----GENIADTIATLNALRP  103 (316)
Q Consensus        34 ~~~~~~~~~~L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i-~l~~~-----~s~~~k----gEs~~Dta~vls~~~~  103 (316)
                      ...+....+.|+||+++-+=+-.--|-   ...-...-|-.++ -+.+.     +.++.+    |=.+.+.+... .. +
T Consensus        25 ~~~f~~~~~~lk~k~iaViGyGsQG~a---hAlNLrDSG~~V~Vglr~~s~~~~s~S~~~A~~dGf~v~~~~eA~-~~-a   99 (491)
T 1yrl_A           25 RDEFADGASYLQGKKVVIVGCGAQGLN---QGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELI-PQ-A   99 (491)
T ss_dssp             GGGGTTTTGGGTTSCEEEECCSHHHHH---HHHHHHHTTCCEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHG-GG-C
T ss_pred             HHHHHCHHHHHCCCEEEEEEECCHHHH---HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCEECCHHHHH-HH-C
T ss_conf             765423468875997999766713499---986778659977999467876545325999997699756799998-63-7


Q ss_pred             CCEEEECCCCCH
Q ss_conf             714652032100
Q gi|254780300|r  104 NIIVIRHPYSGA  115 (316)
Q Consensus       104 d~iv~R~~~~~~  115 (316)
                      |+|++-.|+...
T Consensus       100 Dvv~~L~pD~~q  111 (491)
T 1yrl_A          100 DLVINLTPDKQH  111 (491)
T ss_dssp             SEEEECSCHHHH
T ss_pred             CEEEECCCHHHH
T ss_conf             988886984679


No 111
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=59.91  E-value=6.5  Score=18.13  Aligned_cols=16  Identities=25%  Similarity=0.256  Sum_probs=6.3

Q ss_pred             HHHHHHHHHHHHCCCC
Q ss_conf             7899997987613521
Q gi|254780300|r   60 TQTSFEVAGKLLGVHV   75 (316)
Q Consensus        60 TR~SFe~A~~~LGg~~   75 (316)
                      ++.....++...|-|+
T Consensus        81 ~H~~~~~~al~~gk~V   96 (315)
T 3c1a_A           81 THAEITLAAIASGKAV   96 (315)
T ss_dssp             GHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHHHHHCCCH
T ss_conf             8799999999613221


No 112
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=59.24  E-value=4.8  Score=19.00  Aligned_cols=17  Identities=24%  Similarity=0.397  Sum_probs=8.0

Q ss_pred             HHHHHHHCCCCCCCCCC
Q ss_conf             97987613521112333
Q gi|254780300|r   65 EVAGKLLGVHVININTK   81 (316)
Q Consensus        65 e~A~~~LGg~~i~l~~~   81 (316)
                      ..|+.+||.+++.++++
T Consensus        17 ~~aAk~lGi~v~v~d~~   33 (365)
T 2z04_A           17 ILEGRKLGFKFHVLEDK   33 (365)
T ss_dssp             HHHHGGGTCEEEEECSS
T ss_pred             HHHHHHCCCEEEEEECC
T ss_conf             99999789989999569


No 113
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=58.80  E-value=2.2  Score=21.15  Aligned_cols=21  Identities=10%  Similarity=-0.002  Sum_probs=11.0

Q ss_pred             HHHHHHHHHCCCCEEEECCCC
Q ss_conf             334466420134205532775
Q gi|254780300|r  173 ARSDIMLLNTMGARIRVIAPI  193 (316)
Q Consensus       173 ~~S~~~~~~~~g~~v~~~~P~  193 (316)
                      ......++..+|.++..+.+.
T Consensus       135 ~~~~~~ll~~~g~~v~~~~~~  155 (276)
T 2i76_A          135 LPIVKKIAEEISGKYFVIPSE  155 (276)
T ss_dssp             HHHHHHHHHHHCSCEEECCGG
T ss_pred             HHHHHHHHHHHCCCEEEECCC
T ss_conf             999999999957938996710


No 114
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=58.64  E-value=8.1  Score=17.51  Aligned_cols=24  Identities=13%  Similarity=0.166  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             868775699999999999778142
Q gi|254780300|r  287 QYQVEMGVAVRMAIIKELLENQNK  310 (316)
Q Consensus       287 ~~Qa~Nrl~~~~AlL~~~l~~~~~  310 (316)
                      ++++-.-+-+--|+.+--+++++.
T Consensus       302 ~e~~~~~~~iieai~~sw~~~~~~  325 (330)
T 3e9m_A          302 KELTIATVKIVESFYQEWFDNEGH  325 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999999999999998868998


No 115
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=58.00  E-value=8.8  Score=17.27  Aligned_cols=83  Identities=18%  Similarity=0.196  Sum_probs=48.9

Q ss_pred             CCCCEEEEEEECCCC----HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf             289769999607873----3789999798761352111233332101333422479998741367146520321005542
Q gi|254780300|r   44 LQGLTQINLFLETST----RTQTSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSL  119 (316)
Q Consensus        44 L~gk~~~~lF~kpSt----RTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~  119 (316)
                      ++||+++.+....+-    +..-.++.++.++|...+.++....    .|.-.+.+..+-..++|.|++-..+.......
T Consensus         3 ~~gk~Ig~i~~~~~~~f~~~~~~g~~~~a~~~G~~~~~~~~~~d----~~~q~~~i~~~i~~~vDgiIi~~~~~~~~~~~   78 (291)
T 3l49_A            3 LEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRN----DQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPW   78 (291)
T ss_dssp             CTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC----HHHHHHHHHHHHHHCCSEEEEESSCHHHHHHH
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC----HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
T ss_conf             88999999958999889999999999999974999999938999----99999999999974999999778640315899


Q ss_pred             ---HCCCCCCCCCCC
Q ss_conf             ---001234211112
Q gi|254780300|r  120 ---MHKIKGPSIINA  131 (316)
Q Consensus       120 ---a~~~s~ppVINa  131 (316)
                         ++...+| ||.-
T Consensus        79 l~~~~~~~IP-vv~~   92 (291)
T 3l49_A           79 LQKINDAGIP-LFTV   92 (291)
T ss_dssp             HHHHHHTTCC-EEEE
T ss_pred             HHHHHHCCCC-EEEC
T ss_conf             9999986993-7844


No 116
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransferase; purine biosynthesis, glycosyltransferase, glutamine amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=57.48  E-value=9  Score=17.22  Aligned_cols=90  Identities=19%  Similarity=0.283  Sum_probs=54.7

Q ss_pred             EEEECCCCCHHHH--HHCCCCCCCCCCC-------CCCCCCCHHHHHHHHHHHHCC----CCCCCCCCEEECCC-CCCCC
Q ss_conf             4652032100554--2001234211112-------345663122332222222012----22100010010355-44330
Q gi|254780300|r  106 IVIRHPYSGAVNS--LMHKIKGPSIINA-------GDGTHEHPSQALLDAFAIRHF----KGKISNLHIAICGD-ILHSR  171 (316)
Q Consensus       106 iv~R~~~~~~~~~--~a~~~s~ppVINa-------g~~~~~HP~Q~LaDl~Ti~e~----~g~l~~l~ia~vGD-~~~~~  171 (316)
                      +|+=.|+.+....  +++.+..| .-.+       |-+. --|+|.+=+.. ++.+    ...++|.+|+.|-| +..++
T Consensus       297 vV~~vPds~~~aA~g~a~~~gip-~~~~likn~y~gRtF-I~p~~~~R~~~-v~~Kl~~~~~~i~gk~ivlvDDSIVRGt  373 (504)
T 1ecf_A          297 VVIPIPETSCDIALEIARILGKP-YRQGFVKNRYVGRTF-IMPGQQLRRKS-VRRKLNANRAEFRDKNVLLVDDSIVRGT  373 (504)
T ss_dssp             EEEECTTTTHHHHHHHHHHHTCC-BCCCEEECSCCCCCC-CCSSSCCCCCC-STTTEEECGGGTTTCCEEEEESCCSSSH
T ss_pred             EECCCCCCHHHHHHHHHHHCCCH-HHHEEEEEECCCCCC-CCCCHHHHHHH-HHHCCCCCHHHEECCCEEEEECCHHCCC
T ss_conf             65368995489999999980963-543024540115534-48757887652-0002232342131362799753010264


Q ss_pred             HHHHHHHHHHCCCC---EEEECCCCCCCCC
Q ss_conf             13344664201342---0553277532221
Q gi|254780300|r  172 VARSDIMLLNTMGA---RIRVIAPITLLPK  198 (316)
Q Consensus       172 v~~S~~~~~~~~g~---~v~~~~P~~~~~~  198 (316)
                      +....+.++...|+   ++++++|+-..|-
T Consensus       374 T~k~ii~~Lr~aGakeIhvri~sPpi~~pc  403 (504)
T 1ecf_A          374 TSEQIIEMAREAGAKKVYLASAAPEIRFPN  403 (504)
T ss_dssp             HHHHHHHHHHHTTCSSEEEEESSCCCCSCC
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCC
T ss_conf             199999999976998899997789857875


No 117
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=56.43  E-value=8.4  Score=17.40  Aligned_cols=13  Identities=31%  Similarity=0.437  Sum_probs=5.8

Q ss_pred             HHHHHHHHCCCCC
Q ss_conf             9999999778142
Q gi|254780300|r  298 MAIIKELLENQNK  310 (316)
Q Consensus       298 ~AlL~~~l~~~~~  310 (316)
                      +..++.++...++
T Consensus       301 k~~i~~l~~~~nk  313 (319)
T 1a5z_A          301 KNAINEITAEENK  313 (319)
T ss_dssp             HHHHHHHHTSCC-
T ss_pred             HHHHHHHHHHHHC
T ss_conf             9999999898854


No 118
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=55.88  E-value=7.9  Score=17.60  Aligned_cols=19  Identities=5%  Similarity=0.366  Sum_probs=8.4

Q ss_pred             CCCHHHHHHHHCCCCEEEE
Q ss_conf             2247999874136714652
Q gi|254780300|r   91 IADTIATLNALRPNIIVIR  109 (316)
Q Consensus        91 ~~Dta~vls~~~~d~iv~R  109 (316)
                      +++.+.-+..+.++++++-
T Consensus        96 ~~~i~~~i~~~~p~~iviv  114 (304)
T 2v6b_A           96 FRELVPQITRAAPDAVLLV  114 (304)
T ss_dssp             HHHHHHHHHHHCSSSEEEE
T ss_pred             HHHHHHHHHHCCCCEEEEE
T ss_conf             9999999874299739999


No 119
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=55.80  E-value=7.2  Score=17.84  Aligned_cols=58  Identities=14%  Similarity=0.153  Sum_probs=34.9

Q ss_pred             CCCCHHHHHHHHCCCCEEEECCCCCHH-HHH-HCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             422479998741367146520321005-542-00123421111234566312233222222
Q gi|254780300|r   90 NIADTIATLNALRPNIIVIRHPYSGAV-NSL-MHKIKGPSIINAGDGTHEHPSQALLDAFA  148 (316)
Q Consensus        90 s~~Dta~vls~~~~d~iv~R~~~~~~~-~~~-a~~~s~ppVINag~~~~~HP~Q~LaDl~T  148 (316)
                      -+.|.++-+..+.+|++++=......+ .+. .+.+..++++..|++.. .-+..++.++-
T Consensus       125 v~~~i~~~i~~~~p~a~iin~tNP~~i~t~~~~~~~~~~~~~glC~~~~-~~~~~la~~l~  184 (450)
T 3fef_A          125 IFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVF-GTQKLLAEMVT  184 (450)
T ss_dssp             HHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTTCEEEECCSHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCC-HHHHHHHHHHH
T ss_conf             9999999998319980899824832788845786589874599899830-19999999999


No 120
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=55.56  E-value=9.7  Score=17.02  Aligned_cols=22  Identities=14%  Similarity=0.238  Sum_probs=8.5

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             2342111123456631223322222
Q gi|254780300|r  123 IKGPSIINAGDGTHEHPSQALLDAF  147 (316)
Q Consensus       123 ~s~ppVINag~~~~~HP~Q~LaDl~  147 (316)
                      +.+. ||-||. + .-|-+.=.|++
T Consensus        71 adiv-vitag~-~-~kpg~~R~dll   92 (309)
T 1ur5_A           71 SDVI-VVTSGA-P-RKPGMSREDLI   92 (309)
T ss_dssp             CSEE-EECCCC----------CHHH
T ss_pred             CCEE-EECCCC-C-CCCCCCHHHHH
T ss_conf             9999-986898-8-99998878887


No 121
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=54.40  E-value=10  Score=16.90  Aligned_cols=37  Identities=14%  Similarity=0.185  Sum_probs=15.2

Q ss_pred             CHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCC
Q ss_conf             47999874136714652032100554200123421111
Q gi|254780300|r   93 DTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIIN  130 (316)
Q Consensus        93 Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVIN  130 (316)
                      +....+..+.+|+++.-....=...++....... +||
T Consensus        70 ~l~~~l~~~~~Dliv~~g~~~ii~~~il~~~~~~-~iN  106 (209)
T 1meo_A           70 AIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGK-MLN  106 (209)
T ss_dssp             HHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTS-EEE
T ss_pred             HHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHCC-CEE
T ss_conf             9999998619999999560010778999876079-587


No 122
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.03  E-value=4.6  Score=19.11  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=48.5

Q ss_pred             HHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHH
Q ss_conf             87413671465203210055420012342111123456631223322222220122210001001035544330133446
Q gi|254780300|r   98 LNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDI  177 (316)
Q Consensus        98 ls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~  177 (316)
                      +..-.+|+++-|-.....+.   ++.++| ||.---+.+        |++--....... +-+|+.+|   +.++....-
T Consensus        59 ~~~~~~DviISRG~ta~~Ir---~~~~iP-VVeI~vs~~--------Dil~aL~~a~~~-~~kIavVg---f~~~~~~~~  122 (225)
T 2pju_A           59 LANERCDAIIAAGSNGAYLK---SRLSVP-VILIKPSGY--------DVLQFLAKAGKL-TSSIGVVT---YQETIPALV  122 (225)
T ss_dssp             TTTSCCSEEEEEHHHHHHHH---TTCSSC-EEEECCCHH--------HHHHHHHHTTCT-TSCEEEEE---ESSCCHHHH
T ss_pred             HHCCCCCEEEECCHHHHHHH---HHCCCC-EEEEECCHH--------HHHHHHHHHHHH-CCCEEEEE---CCCCCHHHH
T ss_conf             86499869996856899999---858998-899707876--------899999999975-89889993---764036999


Q ss_pred             HHHHCCCCEEEECCCC
Q ss_conf             6420134205532775
Q gi|254780300|r  178 MLLNTMGARIRVIAPI  193 (316)
Q Consensus       178 ~~~~~~g~~v~~~~P~  193 (316)
                      .....+|.++.+....
T Consensus       123 ~~~~ll~~~i~~~~~~  138 (225)
T 2pju_A          123 AFQKTFNLRLDQRSYI  138 (225)
T ss_dssp             HHHHHHTCCEEEEEES
T ss_pred             HHHHHHCCCEEEEEEC
T ss_conf             9999969944999966


No 123
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=53.28  E-value=11  Score=16.78  Aligned_cols=95  Identities=16%  Similarity=0.271  Sum_probs=53.2

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC---------------------------C
Q ss_conf             2100010010355443301334466420134205532775322211212343---------------------------3
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGV---------------------------E  206 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~---------------------------~  206 (316)
                      |.+...++..+|-   +.+...-+..+..+|+.+..........+.....+.                           .
T Consensus       168 g~v~p~~v~viG~---G~~g~~A~~~a~~lga~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (401)
T 1x13_A          168 GKVPPAKVMVIGA---GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKA  244 (401)
T ss_dssp             EEECCCEEEEECC---SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHH
T ss_pred             CCCCCCEEEEECC---CHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCHHHHHH
T ss_conf             8978754999767---5788999999853797799943778999999874685058864202245785013121556677


Q ss_pred             CCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             005845603686221000113312333444455542023575889998379985995
Q gi|254780300|r  207 VFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       207 ~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                      ....+.+.+..+|+|+......-+            ..+.-|+++.++..++.+++-
T Consensus       245 ~~~~~~~~~~~~DivI~~~~~pg~------------~aP~lit~e~v~~mk~gsVIv  289 (401)
T 1x13_A          245 EMELFAAQAKEVDIIVTTALIPGK------------PAPKLITREMVDSMKAGSVIV  289 (401)
T ss_dssp             HHHHHHHHHHHCSEEEECCCCTTS------------CCCCCBCHHHHHTSCTTCEEE
T ss_pred             HHHHHHHHCCCCCEEEEEEEECCC------------CCCCCCHHHHHHHHCCCCEEE
T ss_conf             888888740554438884000688------------788557599862021798799


No 124
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=52.90  E-value=11  Score=16.74  Aligned_cols=75  Identities=12%  Similarity=0.102  Sum_probs=48.9

Q ss_pred             HHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCC-EEEECCCCCCCCC---CCCCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             2012221000100103554433013344664201342-0553277532221---12123433005845603686221000
Q gi|254780300|r  149 IRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGA-RIRVIAPITLLPK---DISNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       149 i~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~-~v~~~~P~~~~~~---~~~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      ..+.+|++++.++..+|-   +-++...+..+...|. +++++.-..-...   ...+....-+.++.+++..+|+|++.
T Consensus       158 ~~~~~~~l~~~~vLviGa---Gem~~~~~~~L~~~g~~~i~v~nRt~~rA~~la~~~~~~~~~~~~l~~~l~~~DiVIsa  234 (404)
T 1gpj_A          158 AERELGSLHDKTVLVVGA---GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSA  234 (404)
T ss_dssp             HHHHHSCCTTCEEEEESC---CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEEC
T ss_pred             HHHHCCCCCCCEEEEECC---CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEECHHHHHHHHCCCCEEEEE
T ss_conf             998615733481899838---48899999999956888607866876678887650597574268777401238889994


Q ss_pred             EE
Q ss_conf             11
Q gi|254780300|r  225 RM  226 (316)
Q Consensus       225 ~~  226 (316)
                      .-
T Consensus       235 T~  236 (404)
T 1gpj_A          235 TA  236 (404)
T ss_dssp             CS
T ss_pred             CC
T ss_conf             17


No 125
>2gci_A Probable alpha-methylacyl-COA racemase MCR; COA transferase, proton transfer, coenzyme A, isomerase; HET: MRR; 1.60A {Mycobacterium tuberculosis} SCOP: c.123.1.1 PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A*
Probab=51.79  E-value=11  Score=16.63  Aligned_cols=30  Identities=10%  Similarity=-0.048  Sum_probs=13.3

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEECCCCCC
Q ss_conf             233222222201222100010010355443
Q gi|254780300|r  140 SQALLDAFAIRHFKGKISNLHIAICGDILH  169 (316)
Q Consensus       140 ~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~  169 (316)
                      .|+++-++.+.-..+.---..-.+++|...
T Consensus       130 ~~A~sG~~~~~g~~~~~P~~~~~~~~d~~~  159 (360)
T 2gci_A          130 YISLNGILHAIGRGDERPVPPLNLVGDFGG  159 (360)
T ss_dssp             HTTTTSTGGGSSCTTSCCCCCTTCCCCCCT
T ss_pred             EEECCCCHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf             781377332147999998788701443888


No 126
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=50.25  E-value=5.6  Score=18.54  Aligned_cols=24  Identities=17%  Similarity=0.488  Sum_probs=19.0

Q ss_pred             CCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             123433005845603686221000
Q gi|254780300|r  201 SNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       201 ~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      +..|+++++|..|++++||+|+..
T Consensus       125 E~~Gv~vt~D~~EAV~~ADiVIla  148 (358)
T 2b0j_A          125 EDVGLKVTSDDREAVEGADIVITW  148 (358)
T ss_dssp             GGGTCEEESCHHHHHTTCSEEEEC
T ss_pred             HHCCCEEECCHHHHHHCCCEEEEE
T ss_conf             877988876899998339999994


No 127
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 helix bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=48.53  E-value=12  Score=16.43  Aligned_cols=65  Identities=17%  Similarity=0.294  Sum_probs=36.0

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHH-CCCC-EEEECCCCCC----CCCC---CCCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             0010010355443301334466420-1342-0553277532----2211---2123433005845603686221000
Q gi|254780300|r  157 SNLHIAICGDILHSRVARSDIMLLN-TMGA-RIRVIAPITL----LPKD---ISNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       157 ~~l~ia~vGD~~~~~v~~S~~~~~~-~~g~-~v~~~~P~~~----~~~~---~~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      +..+++++|-   +..++..+.++. .++. ++.+..+..-    +.++   ..+..+..+.++++++.+||+|.+.
T Consensus       128 da~~l~iiGa---G~QA~~~l~Al~~v~~i~~V~v~~r~~~~~~~~~~~~~~~~g~~v~~~~s~e~av~~ADII~t~  201 (350)
T 1x7d_A          128 NARKMALIGN---GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTV  201 (350)
T ss_dssp             TCCEEEEECC---STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECC---CHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHCCCEEEEE
T ss_conf             8863899736---1878999999985189549999846815899999876540697756559999997318835762


No 128
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=47.84  E-value=13  Score=16.24  Aligned_cols=169  Identities=12%  Similarity=0.093  Sum_probs=90.5

Q ss_pred             EEEEEEECCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-CCCCEEEECCCCCHHHHHHCCCCC
Q ss_conf             69999607873378999-9798761352111233332101333422479998741-367146520321005542001234
Q gi|254780300|r   48 TQINLFLETSTRTQTSF-EVAGKLLGVHVININTKNSAMKKGENIADTIATLNAL-RPNIIVIRHPYSGAVNSLMHKIKG  125 (316)
Q Consensus        48 ~~~~lF~kpStRTR~SF-e~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~-~~d~iv~R~~~~~~~~~~a~~~s~  125 (316)
                      .+.++=..|+.++.+.. ..++.++|...- +..    +...+.+.+.+.-++.- .+|.|++-.|....+.+-.--..+
T Consensus        40 avIlvgdd~aS~~Yv~~K~k~a~~~Gi~~~-l~~----~~~~~~l~~~I~~LN~D~~v~GIiVQlPLP~~ld~~~il~~I  114 (320)
T 1edz_A           40 VGFLANNDPAAKMYATWTQKTSESMGFRYD-LRV----IEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVV  114 (320)
T ss_dssp             EEEECCCCHHHHHHHHHHHHHHHHHTCEEE-EEE----CSSGGGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTS
T ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCCEEE-CCC----CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCC
T ss_conf             999818987699999999999996889786-444----686889999999974599765179847999631178898548


Q ss_pred             CCC--------CCCCC-------------CCCCCHHHHHHHHHHHHCCC----------CCCCCCCEEECCCCCCCCHHH
Q ss_conf             211--------11234-------------56631223322222220122----------210001001035544330133
Q gi|254780300|r  126 PSI--------INAGD-------------GTHEHPSQALLDAFAIRHFK----------GKISNLHIAICGDILHSRVAR  174 (316)
Q Consensus       126 ppV--------INag~-------------~~~~HP~Q~LaDl~Ti~e~~----------g~l~~l~ia~vGD~~~~~v~~  174 (316)
                      .|-        .|+|-             ....-||-+++=+- |.++.          .+++|.+++.+|.  .+-|..
T Consensus       115 ~p~KDVDGl~~~n~g~L~~~~~~~~~~~~~~~~~PcTp~ai~~-LL~~y~i~~~~~~~g~~l~GK~vvVIGr--S~iVGk  191 (320)
T 1edz_A          115 CKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVK-ILEFLKIYNNLLPEGNRLYGKKCIVINR--SEIVGR  191 (320)
T ss_dssp             CTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHH-HHHHTTCSCTTSCTTCTTTTCEEEEECC--CTTTHH
T ss_pred             CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCEEEEEEC--CCCCCH
T ss_conf             9777748698778878842864223235667768888899999-9998422024555566667876999825--665548


Q ss_pred             HHHHHHHCCCCEEEECCCCCC---CCC-C--CCCCC----CCCCC-CHHHCCCCCCEEEEE
Q ss_conf             446642013420553277532---221-1--21234----33005-845603686221000
Q gi|254780300|r  175 SDIMLLNTMGARIRVIAPITL---LPK-D--ISNMG----VEVFH-DMQKGLKNVDVIMIL  224 (316)
Q Consensus       175 S~~~~~~~~g~~v~~~~P~~~---~~~-~--~~~~~----~~~~~-d~~ea~~~aDvv~~~  224 (316)
                      -+..++..-|+.|+.|.-...   .+. +  ....+    ...+. .+++...++|++++.
T Consensus       192 Pla~lL~~~~aTVt~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~d~l~~~~~~aDIvI~a  252 (320)
T 1edz_A          192 PLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG  252 (320)
T ss_dssp             HHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             HHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEC
T ss_conf             9999997689879984246500026886258862133431211077888763046757852


No 129
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A*
Probab=47.75  E-value=13  Score=16.23  Aligned_cols=74  Identities=12%  Similarity=0.165  Sum_probs=33.5

Q ss_pred             EEEEEEECC---CCHHH----HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf             699996078---73378----99997987613521112333321013334224799987413671465203210055420
Q gi|254780300|r   48 TQINLFLET---STRTQ----TSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLM  120 (316)
Q Consensus        48 ~~~~lF~kp---StRTR----~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a  120 (316)
                      .+..++-.|   +-|-+    .+++.-+.++|..+...+..    +.    .+....+..+.+|+++.-....-...++.
T Consensus        28 ~i~~VvT~pd~~~grg~~~~~~~v~~~A~~~~i~~~~~~~~----~~----~~~~~~~~~~~~dl~i~~~~~~iip~~~l   99 (314)
T 1fmt_A           28 NVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL----RP----QENQQLVAELQADVMVVVAYGLILPKAVL   99 (314)
T ss_dssp             EEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS----CS----HHHHHHHHHTTCSEEEEESCCSCCCHHHH
T ss_pred             CEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC----CC----HHHHHHHHHCCCCEEEEEECCCCCCHHHH
T ss_conf             77999909998556888488997999999859984035234----62----88999998519999999712646999998


Q ss_pred             CCCCCCCCCC
Q ss_conf             0123421111
Q gi|254780300|r  121 HKIKGPSIIN  130 (316)
Q Consensus       121 ~~~s~ppVIN  130 (316)
                      .....- +||
T Consensus       100 ~~~~~g-~iN  108 (314)
T 1fmt_A          100 EMPRLG-CIN  108 (314)
T ss_dssp             HSSTTC-EEE
T ss_pred             HCCCCC-EEE
T ss_conf             578977-782


No 130
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=47.17  E-value=13  Score=16.17  Aligned_cols=102  Identities=18%  Similarity=0.255  Sum_probs=55.1

Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHH-CCCC-EEEECCCCCC----CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             010010355443301334466420-1342-0553277532----221121234330058456036862210001133123
Q gi|254780300|r  158 NLHIAICGDILHSRVARSDIMLLN-TMGA-RIRVIAPITL----LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       158 ~l~ia~vGD~~~~~v~~S~~~~~~-~~g~-~v~~~~P~~~----~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      ..+++++|-   +..++..+.++. .++. ++++..+..-    +.+.. ...+++..++++++.++|+|++..-..+-.
T Consensus       135 ~~~l~iiG~---G~Qa~~~l~a~~~~~~i~~v~v~~r~~~~~~~f~~~l-~~~~~~~~~~~~av~~aDiVitaT~s~~P~  210 (312)
T 2i99_A          135 SEVLCILGA---GVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV-QGEVRVCSSVQEAVAGADVIITVTLATEPI  210 (312)
T ss_dssp             CCEEEEECC---SHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS-SSCCEECSSHHHHHTTCSEEEECCCCSSCC
T ss_pred             CCEEEEECC---CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HCCCEECCCHHHHHHCCCEEEEECCCCCCC
T ss_conf             737999667---1778999999997215636999953816999999984-146413389999951599899714778884


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCCC-CCCCHHHHCCC
Q ss_conf             3344445554202357588999837998599558998768-74476797699
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRN-YEISSSVADGS  282 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~Rg-~Ev~~~v~d~~  282 (316)
                                      ++.+   ..++++.+.....-..+ .|++++++..-
T Consensus       211 ----------------~~~~---~l~~g~~v~~iG~~~~~~~El~~~~~~~a  243 (312)
T 2i99_A          211 ----------------LFGE---WVKPGAHINAVGASRPDWRELDDELMKEA  243 (312)
T ss_dssp             ----------------BCGG---GSCTTCEEEECCCCSTTCCSBCHHHHHHS
T ss_pred             ----------------CCHH---HCCCCCEEEECCCCCCCCCCCCHHHHHCC
T ss_conf             ----------------3275---46876589741679986032087888368


No 131
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=45.93  E-value=14  Score=16.05  Aligned_cols=26  Identities=23%  Similarity=0.313  Sum_probs=11.6

Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             01234211112345663122332222222
Q gi|254780300|r  121 HKIKGPSIINAGDGTHEHPSQALLDAFAI  149 (316)
Q Consensus       121 ~~~s~ppVINag~~~~~HP~Q~LaDl~Ti  149 (316)
                      +.+.++ ||-||- + .-|-|.=.|++..
T Consensus        81 ~~adiV-vitag~-~-~k~g~~R~dll~~  106 (328)
T 2hjr_A           81 QNSDVV-IITAGV-P-RKPNMTRSDLLTV  106 (328)
T ss_dssp             TTCSEE-EECCSC-C-CCTTCCSGGGHHH
T ss_pred             CCCCEE-EEECCC-C-CCCCCCHHHHHHH
T ss_conf             678789-997136-8-9999988888760


No 132
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=44.41  E-value=11  Score=16.64  Aligned_cols=95  Identities=7%  Similarity=0.122  Sum_probs=57.6

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC-------CCCCCCCCHHHCCCCCCEEEEEEE
Q ss_conf             2100010010355443301334466420134205532775322211212-------343300584560368622100011
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISN-------MGVEVFHDMQKGLKNVDVIMILRM  226 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~-------~~~~~~~d~~ea~~~aDvv~~~~~  226 (316)
                      |.+...+++.+|.   +++...-+..+..+|+.++.........+....       ........+.+.+.++|+++..-.
T Consensus       163 ~~v~p~kv~ilG~---G~~g~~a~~~a~~~Ga~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DIvI~~~~  239 (361)
T 1pjc_A          163 PGVKPGKVVILGG---GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL  239 (361)
T ss_dssp             TTBCCCEEEEECC---SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred             CCCCCCEEEEECC---CEECHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             9988734999658---4101257899985698799963758899998875064022202446678887413645775432


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             3312333444455542023575889998379985995
Q gi|254780300|r  227 QQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       227 ~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                      +..+            ..++-++++.++..++.+++.
T Consensus       240 ~~g~------------~~p~li~~~~~~~mk~gsVIv  264 (361)
T 1pjc_A          240 VPGR------------RAPILVPASLVEQMRTGSVIV  264 (361)
T ss_dssp             CTTS------------SCCCCBCHHHHTTSCTTCEEE
T ss_pred             CCCC------------CCCCHHHHHHHHCCCCCCEEE
T ss_conf             2898------------898100588874679987899


No 133
>3fr7_A Putative ketol-acid reductoisomerase (OS05G0573700 protein); rossmann fold, NADPH, knotted protein; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=43.51  E-value=9.6  Score=17.04  Aligned_cols=14  Identities=7%  Similarity=-0.121  Sum_probs=7.1

Q ss_pred             CCCCC-CEEEEEEEC
Q ss_conf             21289-769999607
Q gi|254780300|r   42 TRLQG-LTQINLFLE   55 (316)
Q Consensus        42 ~~L~g-k~~~~lF~k   55 (316)
                      +.|+| |+++.+=+-
T Consensus        49 ~~~kg~K~IaVIGyG   63 (525)
T 3fr7_A           49 EAFKGIKQIGVIGWG   63 (525)
T ss_dssp             HHTTTCSEEEEECCT
T ss_pred             HHHCCCCEEEEECCC
T ss_conf             886589879996867


No 134
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structure initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=43.43  E-value=15  Score=15.80  Aligned_cols=11  Identities=27%  Similarity=0.036  Sum_probs=5.5

Q ss_pred             HHHHHHHHHHH
Q ss_conf             23322222220
Q gi|254780300|r  140 SQALLDAFAIR  150 (316)
Q Consensus       140 ~Q~LaDl~Ti~  150 (316)
                      .|+++-++.+.
T Consensus       145 ~qA~sG~~~~~  155 (428)
T 1q7e_A          145 AQAAGGAASTT  155 (428)
T ss_dssp             HHHHTTHHHHS
T ss_pred             HHHCCCCCCCC
T ss_conf             12025651245


No 135
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural genomics center for infectious disease; 2.20A {Anaplasma phagocytophilum HZ}
Probab=43.32  E-value=15  Score=15.79  Aligned_cols=15  Identities=7%  Similarity=0.138  Sum_probs=6.5

Q ss_pred             HHHHCCCCEEEECCC
Q ss_conf             642013420553277
Q gi|254780300|r  178 MLLNTMGARIRVIAP  192 (316)
Q Consensus       178 ~~~~~~g~~v~~~~P  192 (316)
                      ......|+.+..+.+
T Consensus       130 ~g~~~tG~Tih~v~~  144 (215)
T 3kcq_A          130 AGVKIAGCTLHYVYQ  144 (215)
T ss_dssp             HTCSEEEEEEEECCS
T ss_pred             CCCCCCCCEEEEEEC
T ss_conf             798242758999706


No 136
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032}
Probab=43.24  E-value=15  Score=15.78  Aligned_cols=17  Identities=6%  Similarity=-0.003  Sum_probs=6.2

Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             86877569999999999
Q gi|254780300|r  287 QYQVEMGVAVRMAIIKE  303 (316)
Q Consensus       287 ~~Qa~Nrl~~~~AlL~~  303 (316)
                      ++++-+-+-+-.|+...
T Consensus       307 ~eda~~~~~v~~A~~~S  323 (344)
T 3euw_A          307 FEDGVIALELANACLES  323 (344)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999


No 137
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.20  E-value=9.5  Score=17.08  Aligned_cols=83  Identities=12%  Similarity=0.083  Sum_probs=49.3

Q ss_pred             HHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHH
Q ss_conf             99987413671465203210055420012342111123456631223322222220122210001001035544330133
Q gi|254780300|r   95 IATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVAR  174 (316)
Q Consensus        95 a~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~  174 (316)
                      |+-+.. ++|+|+-|-.....+.   ++.++| ||.---+.+        |++-....... .+-+|+++|   +.++..
T Consensus        45 A~~l~~-~~DVIISRGgTa~~Ir---~~~~iP-VVeI~vs~~--------Dil~al~~a~~-~~~kiavvg---f~~~~~  107 (196)
T 2q5c_A           45 AFGLQD-EVDAIISRGATSDYIK---KSVSIP-SISIKVTRF--------DTMRAVYNAKR-FGNELALIA---YKHSIV  107 (196)
T ss_dssp             HHHHTT-TCSEEEEEHHHHHHHH---TTCSSC-EEEECCCHH--------HHHHHHHHHGG-GCSEEEEEE---ESSCSS
T ss_pred             HHHHHC-CCCEEEECCHHHHHHH---HHCCCC-EEEECCCHH--------HHHHHHHHHHH-HCCCEEEEE---CCCCCH
T ss_conf             997543-9879998965899999---828997-799807887--------99999999997-589789996---785015


Q ss_pred             HHHHHHHCCCCEEEECCCCC
Q ss_conf             44664201342055327753
Q gi|254780300|r  175 SDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       175 S~~~~~~~~g~~v~~~~P~~  194 (316)
                      ..-..+..+|.++.......
T Consensus       108 ~~~~i~~ll~~~i~~~~~~~  127 (196)
T 2q5c_A          108 DKHEIEAMLGVKIKEFLFSS  127 (196)
T ss_dssp             CHHHHHHHHTCEEEEEEECS
T ss_pred             HHHHHHHHHCCCEEEEEECC
T ss_conf             89999998599559999668


No 138
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A*
Probab=42.97  E-value=15  Score=15.76  Aligned_cols=25  Identities=12%  Similarity=0.165  Sum_probs=11.1

Q ss_pred             CCHHHHHHHHHH-HHCCCCCCCCCCE
Q ss_conf             312233222222-2012221000100
Q gi|254780300|r  137 EHPSQALLDAFA-IRHFKGKISNLHI  161 (316)
Q Consensus       137 ~HP~Q~LaDl~T-i~e~~g~l~~l~i  161 (316)
                      +.|+-+++-+.+ +..+.+.++.-+|
T Consensus       118 sNPvDv~t~ia~~~~k~~~~~~~~~i  143 (312)
T 3hhp_A          118 TNPVNTTVAIAAEVLKKAGVYDKNKL  143 (312)
T ss_dssp             SSCHHHHHHHHHHHHHHTTCCCTTSE
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             58724889999999887389980579


No 139
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=42.37  E-value=15  Score=15.70  Aligned_cols=141  Identities=16%  Similarity=0.172  Sum_probs=70.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE-CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             34566312233222222201222100010010-35544330133446642013420553277532221121234330058
Q gi|254780300|r  132 GDGTHEHPSQALLDAFAIRHFKGKISNLHIAI-CGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHD  210 (316)
Q Consensus       132 g~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~-vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d  210 (316)
                      .++. .|-.|+|.+-.-    .|.+. ..|+. +.+   ..-+.++.   ...|..+........ .+  ..    ....
T Consensus       112 vS~~-g~~l~~ll~~~~----~g~L~-~~i~~ViSN---~~d~~~la---~~~~ip~~~~~~~~~-~~--~~----~e~~  172 (302)
T 3o1l_A          112 ASRE-SHCLADLLHRWH----SDELD-CDIACVISN---HQDLRSMV---EWHDIPYYHVPVDPK-DK--EP----AFAE  172 (302)
T ss_dssp             ECSC-CHHHHHHHHHHH----TTCSC-SEEEEEEES---SSTTHHHH---HTTTCCEEECCCCSS-CC--HH----HHHH
T ss_pred             ECCC-CCCHHHHHHHHH----CCCCC-EEEEEEECC---CHHHHHHH---HHHCCCEEEEECCCC-CH--HH----HHHH
T ss_conf             8189-843999999987----79987-268898258---55378889---986399599937843-35--88----8999


Q ss_pred             HHHCC--CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC--CCCCCCC--------------
Q ss_conf             45603--68622100011331233344445554202357588999837998599558--9987687--------------
Q gi|254780300|r  211 MQKGL--KNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHP--GPINRNY--------------  272 (316)
Q Consensus       211 ~~ea~--~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc--LP~~Rg~--------------  272 (316)
                      +-+.+  .+.|+++..+|.                  .-+..++++..+...+=.||  ||.+||.              
T Consensus       173 ~~~~l~~~~~Dlivlagy~------------------~il~~~~l~~~~~~iiNiHpSlLP~~rG~~p~~~ai~~g~k~~  234 (302)
T 3o1l_A          173 VSRLVGHHQADVVVLARYM------------------QILPPQLCREYAHQVINIHHSFLPSFVGAKPYHQASLRGVKLI  234 (302)
T ss_dssp             HHHHHHHTTCSEEEESSCC------------------SCCCTTHHHHTTTCEEEEESSCTTSSCSSCHHHHHHHHTCSEE
T ss_pred             HHHHHHHCCCEEEEEECCC------------------CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEE
T ss_conf             9999873598399973135------------------4378789863212440057876841258582699998499289


Q ss_pred             -----CCCHHHHCCCC---C------------H--HHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             -----44767976997---0------------1--68687756999999999997781422
Q gi|254780300|r  273 -----EISSSVADGSQ---S------------I--IQYQVEMGVAVRMAIIKELLENQNKI  311 (316)
Q Consensus       273 -----Ev~~~v~d~~~---s------------~--v~~Qa~Nrl~~~~AlL~~~l~~~~~~  311 (316)
                           .|+++++.||=   .            +  -..++|..++.+.  +.++++++-.+
T Consensus       235 G~TvH~v~~~lD~GpII~Q~~v~I~~~dt~~~L~~k~~~~e~~ll~~a--i~~~~e~ri~~  293 (302)
T 3o1l_A          235 GATCHYVTEELDAGPIIEQDVVRVSHRDSIENMVRFGRDVEKMVLARG--LRAHLEDRVLV  293 (302)
T ss_dssp             EEEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH--HHHHHTTCEEE
T ss_pred             EEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHCCEEE
T ss_conf             689999848974787489999873999999999999999999999999--99998199799


No 140
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia mallei}
Probab=41.92  E-value=16  Score=15.65  Aligned_cols=144  Identities=17%  Similarity=0.161  Sum_probs=73.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             34566312233222222201222100010010355443301334466420134205532775322211212343300584
Q gi|254780300|r  132 GDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDM  211 (316)
Q Consensus       132 g~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~  211 (316)
                      .++. .|-.|+|.+-.-    .|.+. ..|+.|.  -+..-+..+   ....|..+... |.....+      .+....+
T Consensus       102 vSg~-g~~L~~Ll~~~~----~g~L~-~eI~~Vi--SN~~~~~~l---~~a~~ip~~~~-~~~~~~~------~~~e~~~  163 (292)
T 3lou_A          102 VSKL-EHCLADLLFRWK----MGELK-MDIVGIV--SNHPDFAPL---AAQHGLPFRHF-PITADTK------AQQEAQW  163 (292)
T ss_dssp             ECSC-CHHHHHHHHHHH----HTSSC-CEEEEEE--ESSSTTHHH---HHHTTCCEEEC-CCCSSCH------HHHHHHH
T ss_pred             ECCC-CCCHHHHHHHHH----CCCCC-EEEEEEE--CCCCCHHHH---HHHHCCCEEEE-ECCCCCH------HHHHHHH
T ss_conf             6799-826999999997----69998-1799997--489427999---99754984786-1587627------8899999


Q ss_pred             HHCC--CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC--CCCCCCC---------------
Q ss_conf             5603--68622100011331233344445554202357588999837998599558--9987687---------------
Q gi|254780300|r  212 QKGL--KNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHP--GPINRNY---------------  272 (316)
Q Consensus       212 ~ea~--~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc--LP~~Rg~---------------  272 (316)
                      .+.+  .+.|.|+..+|.                  .-+..++++..+...+=.||  ||.+||.               
T Consensus       164 ~~~l~~~~~Dlivlagym------------------~Il~~~~l~~~~~~iiNiHpSlLP~~~G~~~~~~ai~~g~k~~G  225 (292)
T 3lou_A          164 LDVFETSGAELVILARYM------------------QVLSPEASARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIG  225 (292)
T ss_dssp             HHHHHHHTCSEEEESSCC------------------SCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEE
T ss_pred             HHHHHHCCCEEEEHHHHC------------------CCCCCHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCEEE
T ss_conf             999862498099847813------------------41770633216785599656866233788818899977995799


Q ss_pred             ----CCCHHHHCCC---CCH--------------HHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             ----4476797699---701--------------6868775699999999999778142220
Q gi|254780300|r  273 ----EISSSVADGS---QSI--------------IQYQVEMGVAVRMAIIKELLENQNKITQ  313 (316)
Q Consensus       273 ----Ev~~~v~d~~---~s~--------------v~~Qa~Nrl~~~~AlL~~~l~~~~~~~~  313 (316)
                          -|+++++.||   +..              -..++|.+++.+.  +.++++++=.+.+
T Consensus       226 ~TvH~v~~~lD~GpII~Q~~~~I~~~dt~~~L~~~~~~~E~~~l~~a--i~~~~e~rv~~~~  285 (292)
T 3lou_A          226 ATAHFVTDDLDEGPIIEQVVERVDHSYRPEQLLAVGRDVECITLARA--VKAFIERRVFLNG  285 (292)
T ss_dssp             EEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH--HHHHHTTCEEEET
T ss_pred             EEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHCCEEECC
T ss_conf             99999948983798069999874999999999999999999999999--9999819989909


No 141
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=41.03  E-value=16  Score=15.57  Aligned_cols=42  Identities=10%  Similarity=0.000  Sum_probs=16.1

Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf             12233222222201222100010010355443301334466420134
Q gi|254780300|r  138 HPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMG  184 (316)
Q Consensus       138 HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g  184 (316)
                      -|+-.++-+  +++..|......|.-.. .+  -++|.--.++..+|
T Consensus       134 NPvd~~t~~--~~k~sg~~~~rvig~gt-~L--Ds~R~~~~la~~l~  175 (329)
T 1b8p_A          134 NPANTNAYI--AMKSAPSLPAKNFTAML-RL--DHNRALSQIAAKTG  175 (329)
T ss_dssp             SSHHHHHHH--HHHTCTTSCGGGEEECC-HH--HHHHHHHHHHHHHT
T ss_pred             CCHHHHHHH--HHHHCCCCCCCEEEEEC-HH--HHHHHHHHHHHHHC
T ss_conf             907889999--99975999856686401-57--99999899999958


No 142
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 1llc_A*
Probab=40.90  E-value=16  Score=15.55  Aligned_cols=26  Identities=19%  Similarity=0.270  Sum_probs=10.0

Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCEEECCC
Q ss_conf             12233222222201222100010010355
Q gi|254780300|r  138 HPSQALLDAFAIRHFKGKISNLHIAICGD  166 (316)
Q Consensus       138 HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD  166 (316)
                      -|+-.++-++  ++..| +..-++.-.|-
T Consensus       126 NPvd~~~~~~--~~~sg-~~~~rvig~gt  151 (326)
T 2zqz_A          126 NPVDILTYAT--WKLSG-FPKNRVVGSGT  151 (326)
T ss_dssp             SSHHHHHHHH--HHHHC-CCGGGEEECTT
T ss_pred             CCCHHHHHHH--HHHHC-CCHHHEEECCC
T ss_conf             8614899999--99709-98265770573


No 143
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=40.77  E-value=16  Score=15.54  Aligned_cols=141  Identities=12%  Similarity=0.137  Sum_probs=72.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             34566312233222222201222100010010355443301334466420134205532775322211212343300584
Q gi|254780300|r  132 GDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDM  211 (316)
Q Consensus       132 g~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~  211 (316)
                      .++. .|..|+|+|-.    ..|.+. ..|+.|-    ||-...........+..+..+ |.....+...      ...+
T Consensus        96 vSg~-g~~l~~ll~~~----~~g~L~-~~i~~Vi----Sn~~~~~~~~~~~~~ip~~~~-~~~~~~~~~~------e~~~  158 (288)
T 3obi_A           96 VSQS-DHCLADILYRW----RVGDLH-MIPTAIV----SNHPRETFSGFDFGDIPFYHF-PVNKDTRRQQ------EAAI  158 (288)
T ss_dssp             ECSC-CHHHHHHHHHH----HTTSSC-EEEEEEE----ESSCGGGSCCTTTTTCCEEEC-CCCTTTHHHH------HHHH
T ss_pred             EECC-CHHHHHHHHHH----HCCCCC-CEEEEEE----CCCHHHHHHHHHHCCCCEEEE-CCCCCCHHHH------HHHH
T ss_conf             9478-33899999999----749998-4378995----685658997887479998992-8888757999------9989


Q ss_pred             HHCC--CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECC--CCCCCCC---------------
Q ss_conf             5603--68622100011331233344445554202357588999837998599558--9987687---------------
Q gi|254780300|r  212 QKGL--KNVDVIMILRMQQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHP--GPINRNY---------------  272 (316)
Q Consensus       212 ~ea~--~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHc--LP~~Rg~---------------  272 (316)
                      -+.+  .+.|+|+..+|.                  +-+..++++..+...+=+||  ||.+||.               
T Consensus       159 l~~l~~~~~Dlivlag~~------------------~il~~~~l~~~~~~iiNiHpslLP~~rG~~p~~~ai~~g~k~~G  220 (288)
T 3obi_A          159 TALIAQTHTDLVVLARYM------------------QILSDEMSARLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIG  220 (288)
T ss_dssp             HHHHHHHTCCEEEESSCC------------------SCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEE
T ss_pred             HHHHHHCCCCEEEEEEEC------------------CCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEE
T ss_conf             999985498699984005------------------43782666425786534179778555765769999984996600


Q ss_pred             ----CCCHHHHCCCC---------------CHH--HHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ----44767976997---------------016--86877569999999999977814
Q gi|254780300|r  273 ----EISSSVADGSQ---------------SII--QYQVEMGVAVRMAIIKELLENQN  309 (316)
Q Consensus       273 ----Ev~~~v~d~~~---------------s~v--~~Qa~Nrl~~~~AlL~~~l~~~~  309 (316)
                          .|+++++.||=               ++.  ..++|.+++.+  .+.+++.++=
T Consensus       221 ~TvH~v~~~lD~G~II~Q~~~~I~~~dt~~~l~~k~~~~e~~~l~~--al~~~~~~ri  276 (288)
T 3obi_A          221 ATAHYVTSALDEGPIIDQDVERISHRDTPADLVRKGRDIERRVLSR--ALHYHLDDRV  276 (288)
T ss_dssp             EEEEECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHH--HHHHHHTTCE
T ss_pred             EEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHCCCE
T ss_conf             3899971798678737999987699999999999999999999999--9999980999


No 144
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=40.40  E-value=12  Score=16.43  Aligned_cols=95  Identities=11%  Similarity=0.124  Sum_probs=56.3

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCC-CCCCC--CCHHHCCCCCCEEEEEEE
Q ss_conf             21000100103554433013344664201342055327753222112----123-43300--584560368622100011
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI----SNM-GVEVF--HDMQKGLKNVDVIMILRM  226 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~----~~~-~~~~~--~d~~ea~~~aDvv~~~~~  226 (316)
                      |.+..-++..+|-   +++...-+..+..+|+.+.......-.....    ... ..+..  ....+.++++|+|++...
T Consensus       164 g~v~pakv~VlGa---G~ag~~A~~~a~~lga~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DivI~~~~  240 (377)
T 2vhw_A          164 PGVEPADVVVIGA---GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL  240 (377)
T ss_dssp             TTBCCCEEEEECC---SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCCCEEEEECC---CCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             8867765999678---6201357999975698899824126777667876377642213256655420024428997124


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             3312333444455542023575889998379985995
Q gi|254780300|r  227 QQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       227 ~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                      +..+.            .+.-++++.++..++.+++.
T Consensus       241 i~g~~------------~p~li~~~~v~~mk~gsVIv  265 (377)
T 2vhw_A          241 VPGAK------------APKLVSNSLVAHMKPGAVLV  265 (377)
T ss_dssp             CTTSC------------CCCCBCHHHHTTSCTTCEEE
T ss_pred             CCCCC------------CCCCCHHHHHHCCCCCCEEE
T ss_conf             57988------------98347198985278998899


No 145
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=39.80  E-value=17  Score=15.44  Aligned_cols=87  Identities=13%  Similarity=0.141  Sum_probs=35.1

Q ss_pred             CCHHHHHHHHCCCCEEEECCCCCHHHHH---HCCCC-CCCCCCCCCCCCCCH--HHHHHHHHHHHCCCCCCCCCCE-EEC
Q ss_conf             2479998741367146520321005542---00123-421111234566312--2332222222012221000100-103
Q gi|254780300|r   92 ADTIATLNALRPNIIVIRHPYSGAVNSL---MHKIK-GPSIINAGDGTHEHP--SQALLDAFAIRHFKGKISNLHI-AIC  164 (316)
Q Consensus        92 ~Dta~vls~~~~d~iv~R~~~~~~~~~~---a~~~s-~ppVINag~~~~~HP--~Q~LaDl~Ti~e~~g~l~~l~i-a~v  164 (316)
                      .|....+.  .+|++++-.++......+   ..+.. ..++|++.-|....|  .+.+.+++  .+.++    .++ ++.
T Consensus        82 ~~l~~~~~--~~d~iiiavPS~~~~~~~~~~~~~l~~~~~iv~~~KG~~~~~~~~~~~se~i--~~~~~----~~~~~ls  153 (354)
T 1x0v_A           82 PDVVQAAE--DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVI--GERLG----IPMSVLM  153 (354)
T ss_dssp             SSHHHHHT--TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHH--HHHHT----CCEEEEE
T ss_pred             CCHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEHHHHH--HHHCC----CCEEEEE
T ss_conf             67998871--7657765350599999998877764225416774100101798641399988--88739----9769985


Q ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             55443301334466420134205532775
Q gi|254780300|r  165 GDILHSRVARSDIMLLNTMGARIRVIAPI  193 (316)
Q Consensus       165 GD~~~~~v~~S~~~~~~~~g~~v~~~~P~  193 (316)
                      |+.    .+.   +.+...+..+++++..
T Consensus       154 GPs----~A~---Eva~g~pta~~ias~~  175 (354)
T 1x0v_A          154 GAN----IAS---EVADEKFCETTIGCKD  175 (354)
T ss_dssp             CSC----CHH---HHHTTCCEEEEEECSS
T ss_pred             CCC----CHH---HHHCCCCCCCCCCCCC
T ss_conf             787----489---9821888655556799


No 146
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, NAD dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=39.66  E-value=17  Score=15.43  Aligned_cols=134  Identities=8%  Similarity=0.091  Sum_probs=59.8

Q ss_pred             CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCEEEEEEECCCC-HHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             78223899999999999999996442048775---21289769999607873-378999979876135211123333210
Q gi|254780300|r   10 VTVKDLSMQDVNYLLDRANEYFQKKSHFNPST---TRLQGLTQINLFLETST-RTQTSFEVAGKLLGVHVININTKNSAM   85 (316)
Q Consensus        10 L~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~---~~L~gk~~~~lF~kpSt-RTR~SFe~A~~~LGg~~i~l~~~~s~~   85 (316)
                      |.+-|.+++-+....+++..+.....+.....   ..|+|..++.+=..++. ..|..=+..-.+.|.    +...+..+
T Consensus        34 i~L~DId~~rl~~~~~l~~~~~~~~~~v~~t~d~~~al~gAD~Vv~t~~vg~~~~~~~d~~i~~~~gi----~~~~t~g~  109 (417)
T 1up7_A           34 VIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGL----IGQETTGV  109 (417)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTC----CCCSSSTH
T ss_pred             EEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCE----EEEECCCC
T ss_conf             99985998999999999986640697299977889984799999994235899845488640764785----44323451


Q ss_pred             C-------CCCCCCCHHHHHHHHCCCCEEEECCCCCH--HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             1-------33342247999874136714652032100--5542001234211112345663122332222222
Q gi|254780300|r   86 K-------KGENIADTIATLNALRPNIIVIRHPYSGA--VNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAI  149 (316)
Q Consensus        86 ~-------kgEs~~Dta~vls~~~~d~iv~R~~~~~~--~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti  149 (316)
                      +       .=--+.|.++.+.. .+|++++=....-.  ...+.+.+..|.++..|.+.. +-+..++.++-.
T Consensus       110 gG~~~alRtiPv~~~i~~~i~~-~P~A~lin~tNP~~i~t~a~~~~~~~~k~~glc~~~~-~~~~~la~~l~~  180 (417)
T 1up7_A          110 GGFSAALRAFPIVEEYVDTVRK-TSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPI-NFIREIAEMFSA  180 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-TTCCEEEECSSSHHHHHHHHHHTTCCSSEEECCSHHH-HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCHH-HHHHHHHHHHCC
T ss_conf             0899987515899999999865-9981999925918999999997388886786289678-899999998589


No 147
>1hr8_O COX4, cytochrome C oxidase polypeptide IV; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.70A {Saccharomyces cerevisiae}
Probab=37.44  E-value=6  Score=18.35  Aligned_cols=13  Identities=38%  Similarity=0.416  Sum_probs=10.7

Q ss_pred             EEECCCCHHHHHH
Q ss_conf             9607873378999
Q gi|254780300|r   52 LFLETSTRTQTSF   64 (316)
Q Consensus        52 lF~kpStRTR~SF   64 (316)
                      -||||.|||-+|-
T Consensus         8 rffkpatrtlcss   20 (26)
T 1hr8_O            8 RFFKPATRTLCSS   20 (26)
T ss_pred             HHCCCHHHHHHCC
T ss_conf             2038145523100


No 148
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=36.71  E-value=19  Score=15.14  Aligned_cols=12  Identities=17%  Similarity=0.301  Sum_probs=5.2

Q ss_pred             CCEEEECCCCCC
Q ss_conf             420553277532
Q gi|254780300|r  184 GARIRVIAPITL  195 (316)
Q Consensus       184 g~~v~~~~P~~~  195 (316)
                      |++.+++.|..+
T Consensus       162 ~~~~tivRP~~l  173 (236)
T 3e8x_A          162 SLDYTIVRPGPL  173 (236)
T ss_dssp             SSEEEEEEECSE
T ss_pred             CCCEEEEECCCC
T ss_conf             999899978712


No 149
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=36.47  E-value=17  Score=15.36  Aligned_cols=17  Identities=24%  Similarity=0.190  Sum_probs=10.1

Q ss_pred             HHHHHHHHHCCCCCCCC
Q ss_conf             99979876135211123
Q gi|254780300|r   63 SFEVAGKLLGVHVININ   79 (316)
Q Consensus        63 SFe~A~~~LGg~~i~l~   79 (316)
                      .|..+..+||..+..++
T Consensus        48 ~~~~~f~~lG~~v~~ld   64 (206)
T 3l4e_A           48 AGKKALESLGLLVEELD   64 (206)
T ss_dssp             HHHHHHHHTTCEEEECC
T ss_pred             HHHHHHHHCCCEEEEEE
T ss_conf             99999998799789985


No 150
>2ldx_A APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.96A {Mus musculus} SCOP: c.2.1.5 d.162.1.1
Probab=34.60  E-value=15  Score=15.85  Aligned_cols=79  Identities=16%  Similarity=0.100  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             37899997987613521112333321013334--2247999874136714652032100554200123421111234566
Q gi|254780300|r   59 RTQTSFEVAGKLLGVHVININTKNSAMKKGEN--IADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTH  136 (316)
Q Consensus        59 RTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs--~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~  136 (316)
                      =.-++|..+...++....-+|.... .-+|+.  +.|.+    .+.....++....   ..+ .+.+.+. ||-||- + 
T Consensus        31 G~~~a~~l~~~~~~~el~L~Di~~~-~~~g~a~DL~~~~----~~~~~~~~~~~~~---~~~-~~~aDiv-vi~ag~-p-   98 (331)
T 2ldx_A           31 GMACAISILLKGLADELALVDADTD-KLRGEALDLQHGS----LFLSTPKIVFGKD---YNV-SANSKLV-IITAGA-R-   98 (331)
T ss_dssp             HHHHHHHHHTTTSCSEEEEECSCHH-HHHHHHHHHHHTT----TTCSCCEEEEESS---GGG-GTTEEEE-EECCSC-C-
T ss_pred             HHHHHHHHHHCCCCCEEEEECCCCC-HHHHHHHHHHCCC----CCCCCCEEEECCC---HHH-HCCCCEE-EECCCC-C-
T ss_conf             9999999984699887999748997-5788999987665----4469971881798---788-2899899-973788-8-


Q ss_pred             CCHHHHHHHHHHH
Q ss_conf             3122332222222
Q gi|254780300|r  137 EHPSQALLDAFAI  149 (316)
Q Consensus       137 ~HP~Q~LaDl~Ti  149 (316)
                      .-|-+.=.|++..
T Consensus        99 r~pg~~R~dll~~  111 (331)
T 2ldx_A           99 MVSGQTRLDLLQR  111 (331)
T ss_dssp             CCTTTCSSCTTHH
T ss_pred             CCCCCCHHHHHHH
T ss_conf             8999987788876


No 151
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=34.59  E-value=18  Score=15.23  Aligned_cols=131  Identities=12%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCC----CCCC----CCCCHHHHHHHHCCCCEEEECCCCCHH---HHHHCCCCCCCCCC
Q ss_conf             999979876135211123333210----1333----422479998741367146520321005---54200123421111
Q gi|254780300|r   62 TSFEVAGKLLGVHVININTKNSAM----KKGE----NIADTIATLNALRPNIIVIRHPYSGAV---NSLMHKIKGPSIIN  130 (316)
Q Consensus        62 ~SFe~A~~~LGg~~i~l~~~~s~~----~kgE----s~~Dta~vls~~~~d~iv~R~~~~~~~---~~~a~~~s~ppVIN  130 (316)
                      .|+..+..+-|..+..+|.+....    ..|-    .+.++..-...- +|+|++=+|-....   .++....+.-.|+-
T Consensus        21 ~Sla~aL~~~g~~V~g~D~~~~~~~~A~~~g~~~~~~~~~~l~~a~~~-~DLIIlavPv~~i~~vl~~l~~~~~~~ivTD   99 (341)
T 3ktd_A           21 GSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAE-DALIVLAVPMTAIDSLLDAVHTHAPNNGFTD   99 (341)
T ss_dssp             HHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHT-TCEEEECSCHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHCCC-CCEEEECCCHHHHHHHHHHHHCCCCCCEEEC
T ss_conf             999999987879899998999999999985998545100568774046-8689966973666665676512466433411


Q ss_pred             CCCCCCCCHHHHHHHHHHHH------------CCCC-------CCCCCCEEECCCCCCC--CHH-------HHHHHHHHC
Q ss_conf             23456631223322222220------------1222-------1000100103554433--013-------344664201
Q gi|254780300|r  131 AGDGTHEHPSQALLDAFAIR------------HFKG-------KISNLHIAICGDILHS--RVA-------RSDIMLLNT  182 (316)
Q Consensus       131 ag~~~~~HP~Q~LaDl~Ti~------------e~~g-------~l~~l~ia~vGD~~~~--~v~-------~S~~~~~~~  182 (316)
                      .|+ ....+++.+... ...            |..|       -++|..|..+.+-..+  .+.       .....+...
T Consensus       100 VgS-vK~~i~~~~~~~-~~~~~fVg~HPMaG~E~sG~~aa~~~LF~g~~~ilt~~~~~~~~~~~~~~~~~~~~~~~l~~~  177 (341)
T 3ktd_A          100 VVS-VKTAVYDAVKAR-NMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALA  177 (341)
T ss_dssp             CCS-CSHHHHHHHHHT-TCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHHHHHHH-CCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             345-528999998864-235641014643356666743012335057459971798776778888999999999998750


Q ss_pred             CCCEEEECCCCCC
Q ss_conf             3420553277532
Q gi|254780300|r  183 MGARIRVIAPITL  195 (316)
Q Consensus       183 ~g~~v~~~~P~~~  195 (316)
                      +|+++....|++.
T Consensus       178 ~Ga~v~~m~~~~H  190 (341)
T 3ktd_A          178 VGAEVVPSRVGPH  190 (341)
T ss_dssp             TTCEEEECCHHHH
T ss_pred             CCCEEEEECHHHH
T ss_conf             8958999457899


No 152
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=34.06  E-value=21  Score=14.86  Aligned_cols=15  Identities=20%  Similarity=0.253  Sum_probs=5.6

Q ss_pred             HHHHHHHHHHHCCCC
Q ss_conf             899997987613521
Q gi|254780300|r   61 QTSFEVAGKLLGVHV   75 (316)
Q Consensus        61 R~SFe~A~~~LGg~~   75 (316)
                      +...-.++.+.|-|+
T Consensus        80 H~~~~~~al~~gkhv   94 (352)
T 3kux_A           80 HFPLAQSALAAGKHV   94 (352)
T ss_dssp             HHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHHHCCCCE
T ss_conf             898899999859977


No 153
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis H37RV}
Probab=33.71  E-value=21  Score=14.83  Aligned_cols=32  Identities=9%  Similarity=-0.013  Sum_probs=15.1

Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
Q ss_conf             12233222222201222100010010355443
Q gi|254780300|r  138 HPSQALLDAFAIRHFKGKISNLHIAICGDILH  169 (316)
Q Consensus       138 HP~Q~LaDl~Ti~e~~g~l~~l~ia~vGD~~~  169 (316)
                      .=.|+++-++.+.-.-+.-.-....+++|...
T Consensus       130 ~~~~A~sG~~~~~g~~~~~P~~~~~~~~d~~~  161 (359)
T 2g04_A          130 INYLSQTGALAAFGYADRPPMPPLNLVADFGG  161 (359)
T ss_dssp             HHHHHHHTSGGGCSCSSSCCCCCTTCCCCCCT
T ss_pred             CCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf             55435410043326899998678602588889


No 154
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, MFE-1, fatty acid beta oxidation, oxidoreductase; 1.90A {Rattus norvegicus}
Probab=32.61  E-value=22  Score=14.71  Aligned_cols=26  Identities=23%  Similarity=0.308  Sum_probs=11.1

Q ss_pred             HHHHHHC-CCCEEEECCCCCHHHHHHC
Q ss_conf             9987413-6714652032100554200
Q gi|254780300|r   96 ATLNALR-PNIIVIRHPYSGAVNSLMH  121 (316)
Q Consensus        96 ~vls~~~-~d~iv~R~~~~~~~~~~a~  121 (316)
                      .-+..+. .++|+.-+.+.-.+.++++
T Consensus       134 ~~le~~~~~~~IlaSNTSsl~i~~la~  160 (463)
T 1zcj_A          134 AELSALCKPGAFLCTNTSALNVDDIAS  160 (463)
T ss_dssp             HHHHHHSCTTCEEEECCSSSCHHHHHT
T ss_pred             HHHHHHHCCCCEEEECCCCCCHHHHHH
T ss_conf             999977278764640367677999986


No 155
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=32.60  E-value=22  Score=14.71  Aligned_cols=35  Identities=11%  Similarity=0.009  Sum_probs=29.0

Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             01001035544330133446642013420553277532
Q gi|254780300|r  158 NLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       158 ~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~  195 (316)
                      ..++.++|-   +.|+..+..++..+|++++++.|..-
T Consensus       199 ~~~L~I~Ga---Ghva~~la~la~~lgf~V~v~D~r~~  233 (362)
T 3on5_A          199 KERLIIFGA---GPDVPPLVTFASNVGFYTVVTDWRPN  233 (362)
T ss_dssp             CEEEEEECC---STTHHHHHHHHHHHTEEEEEEESCGG
T ss_pred             CCEEEEEEC---CHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf             855999706---65089999999878978999748634


No 156
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=32.29  E-value=15  Score=15.69  Aligned_cols=64  Identities=14%  Similarity=0.167  Sum_probs=37.3

Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCC-------CCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             010010355443301334466420134-205532775322211212-------3433005845603686221000
Q gi|254780300|r  158 NLHIAICGDILHSRVARSDIMLLNTMG-ARIRVIAPITLLPKDISN-------MGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       158 ~l~ia~vGD~~~~~v~~S~~~~~~~~g-~~v~~~~P~~~~~~~~~~-------~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      ..||+.+|=   +++.+.....+...| .+++++....-..+....       ..+.-..++.+.+++.|+|+..
T Consensus         5 ~~kI~ViGa---G~vG~~va~~L~~~~~~~v~~~dr~~~~~~~~~~~~~~~~~~d~~d~~~l~~~l~~~DvVi~~   76 (118)
T 3ic5_A            5 RWNICVVGA---GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISA   76 (118)
T ss_dssp             CEEEEEECC---SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEECC---CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEC
T ss_conf             078899867---999999999998789984786126566641000122221112448999999998599899983


No 157
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens AM1} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=32.02  E-value=21  Score=14.80  Aligned_cols=105  Identities=9%  Similarity=0.042  Sum_probs=57.2

Q ss_pred             HHHCCCCCCCC-CCCCCCCCCCHHHHHHHHHHH-HCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             42001234211-112345663122332222222-0122210001001035544330133446642013420553277532
Q gi|254780300|r  118 SLMHKIKGPSI-INAGDGTHEHPSQALLDAFAI-RHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL  195 (316)
Q Consensus       118 ~~a~~~s~ppV-INag~~~~~HP~Q~LaDl~Ti-~e~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~  195 (316)
                      +.+++.-+||+ ++...++..-=|-+-+=+.-+ ++..++++|.++...|-  .+-+.......++.-|++|.++.=..-
T Consensus        77 ~~~~~~~~~~~~vsv~~d~~g~~ttaaa~v~~~~~~~~~~l~gK~~lVtGa--tggiG~a~A~~la~~Ga~V~i~~R~~e  154 (287)
T 1lu9_A           77 EAVKKRFFGPFRVSCMLDSNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAG--TGPVGMRSAALLAGEGAEVVLCGRKLD  154 (287)
T ss_dssp             HHHHHHCBTTBCCEEEECSTTHHHHHHHHHHHHHHHTTSCCTTCEEEEETC--SSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC--CHHHHHHHHHHHHHCCCEEEEEECCHH
T ss_conf             999983689706886407997445899999999996499989998999858--769999999999986998999959999


Q ss_pred             C----CCCC--------CCCCCCCCCCHHHCCCCCCEEEEE
Q ss_conf             2----2112--------123433005845603686221000
Q gi|254780300|r  196 L----PKDI--------SNMGVEVFHDMQKGLKNVDVIMIL  224 (316)
Q Consensus       196 ~----~~~~--------~~~~~~~~~d~~ea~~~aDvv~~~  224 (316)
                      .    .+..        ....+....+..+++.++|+++-.
T Consensus       155 ~~~~~a~~l~~~~~~~~~~~D~s~~~~~~~~~~~~DIlinn  195 (287)
T 1lu9_A          155 KAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEC
T ss_conf             99999886540488489998437478999985899899989


No 158
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=31.95  E-value=22  Score=14.67  Aligned_cols=25  Identities=8%  Similarity=0.137  Sum_probs=10.9

Q ss_pred             EEECCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             9607873378999979876135211
Q gi|254780300|r   52 LFLETSTRTQTSFEVAGKLLGVHVI   76 (316)
Q Consensus        52 lF~kpStRTR~SFe~A~~~LGg~~i   76 (316)
                      ++--..+-++.....++.+-|-|++
T Consensus        70 V~i~tp~~~h~~~~~~al~~gk~V~   94 (354)
T 3db2_A           70 VIITVPNDKHAEVIEQCARSGKHIY   94 (354)
T ss_dssp             EEECSCTTSHHHHHHHHHHTTCEEE
T ss_pred             EEECCCHHHHHHHHHHHHHCCCEEE
T ss_conf             9987977888888999997899799


No 159
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, protein structure initiative; 2.85A {Plasmodium falciparum 3D7}
Probab=31.20  E-value=23  Score=14.56  Aligned_cols=13  Identities=8%  Similarity=0.255  Sum_probs=8.5

Q ss_pred             CCCEEEECCCCCH
Q ss_conf             6714652032100
Q gi|254780300|r  103 PNIIVIRHPYSGA  115 (316)
Q Consensus       103 ~d~iv~R~~~~~~  115 (316)
                      +|+|++-.|+...
T Consensus       104 ad~IiiavPS~~~  116 (375)
T 1yj8_A          104 ADLLIFIVPCQYL  116 (375)
T ss_dssp             CSEEEECCCHHHH
T ss_pred             CCEEEEECCHHHH
T ss_conf             9889994670899


No 160
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=30.50  E-value=24  Score=14.49  Aligned_cols=77  Identities=16%  Similarity=0.147  Sum_probs=35.5

Q ss_pred             EEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCC
Q ss_conf             699996078---73378999979876135211123333210133342247999874136714652032100554200123
Q gi|254780300|r   48 TQINLFLET---STRTQTSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIK  124 (316)
Q Consensus        48 ~~~~lF~kp---StRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s  124 (316)
                      .++.++.+|   +.+..+  ...+.+.|..+..  +... -...+...+.+..+..+.+|++++-....=...++.....
T Consensus        47 ~i~~V~T~pdk~~~~~~v--~~~a~~~~ipv~~--~~~~-~~~~~~~~e~~~~l~~~~~Dl~v~~~~~~iip~~il~~~~  121 (329)
T 2bw0_A           47 EVVGVFTVPDKDGKADPL--GLEAEKDGVPVFK--YSRW-RAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPR  121 (329)
T ss_dssp             EEEEEEECCCCSSCCCHH--HHHHHHHTCCEEE--CSCC-EETTEECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCST
T ss_pred             CEEEEEECCCCCCCCCHH--HHHHHHHCCCEEC--CCCC-CCCCCCCHHHHHHHHHHCCCEEEEECCHHHCCHHHHHCCC
T ss_conf             789999089988898969--9999981998864--4336-7612048999999996296999990612437798863478


Q ss_pred             CCCCCC
Q ss_conf             421111
Q gi|254780300|r  125 GPSIIN  130 (316)
Q Consensus       125 ~ppVIN  130 (316)
                      .- +||
T Consensus       122 ~g-~iN  126 (329)
T 2bw0_A          122 HG-SII  126 (329)
T ss_dssp             TC-EEE
T ss_pred             CC-EEE
T ss_conf             98-899


No 161
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=29.73  E-value=24  Score=14.40  Aligned_cols=10  Identities=20%  Similarity=0.268  Sum_probs=3.7

Q ss_pred             CHHHHHHHHH
Q ss_conf             1223322222
Q gi|254780300|r  138 HPSQALLDAF  147 (316)
Q Consensus       138 HP~Q~LaDl~  147 (316)
                      .|-|.-.|++
T Consensus        86 k~g~~R~dll   95 (321)
T 3p7m_A           86 KPGMSRDDLL   95 (321)
T ss_dssp             CTTCCHHHHH
T ss_pred             CCCCCHHHHH
T ss_conf             9999889999


No 162
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=29.09  E-value=24  Score=14.51  Aligned_cols=12  Identities=17%  Similarity=0.157  Sum_probs=4.4

Q ss_pred             HHHHHHHHCCCC
Q ss_conf             997987613521
Q gi|254780300|r   64 FEVAGKLLGVHV   75 (316)
Q Consensus        64 Fe~A~~~LGg~~   75 (316)
                      ....-.++|.++
T Consensus        28 l~~~L~~~G~~v   39 (196)
T 1qo0_D           28 LVLQLIRIGCSV   39 (196)
T ss_dssp             HHHHHHHHTCEE
T ss_pred             HHHHHHHCCCEE
T ss_conf             999999869988


No 163
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=29.00  E-value=25  Score=14.32  Aligned_cols=38  Identities=26%  Similarity=0.325  Sum_probs=32.2

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             21000100103554433013344664201342055327753
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPIT  194 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~  194 (316)
                      .+++|.+++.-|   -++|.......+...|+++..+....
T Consensus       169 ~~l~g~~vaIQG---fGnVG~~~a~~L~~~Gakvv~~d~~~  206 (364)
T 1leh_A          169 DSLEGLAVSVQG---LGNVAKALCKKLNTEGAKLVVTDVNK  206 (364)
T ss_dssp             CCCTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf             886788899985---67168999999997799999954887


No 164
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=27.54  E-value=27  Score=14.16  Aligned_cols=10  Identities=20%  Similarity=0.620  Sum_probs=4.4

Q ss_pred             HCCCCEEEEC
Q ss_conf             1367146520
Q gi|254780300|r  101 LRPNIIVIRH  110 (316)
Q Consensus       101 ~~~d~iv~R~  110 (316)
                      +.+|+.++-+
T Consensus       215 ~~p~iaviTN  224 (524)
T 3hn7_A          215 YRPRTAILNN  224 (524)
T ss_dssp             CCCSEEEECC
T ss_pred             CCCCEEEEEC
T ss_conf             4676899974


No 165
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=27.38  E-value=25  Score=14.34  Aligned_cols=41  Identities=22%  Similarity=0.269  Sum_probs=29.2

Q ss_pred             CCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCC
Q ss_conf             224799987413671465203210055420012342111123
Q gi|254780300|r   91 IADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAG  132 (316)
Q Consensus        91 ~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag  132 (316)
                      +-+.++-+...++|++++=+..+..+..+-+..++| ||+.+
T Consensus        64 l~~~~~~le~~g~DaivIaC~t~~~l~~~r~~~~iP-Vig~~  104 (228)
T 2eq5_A           64 IIRLAKEFEREGVDAIIISCAADPAVEKVRKLLSIP-VIGAG  104 (228)
T ss_dssp             HHHHHHHHHHTTCSEEEECSTTCTTHHHHHHHCSSC-EEEHH
T ss_pred             HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCC-EECCH
T ss_conf             999999998779989999068759999999865998-55631


No 166
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=27.22  E-value=18  Score=15.23  Aligned_cols=53  Identities=9%  Similarity=0.229  Sum_probs=22.5

Q ss_pred             CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             28976999960787337899997987613521112333321013334224799
Q gi|254780300|r   44 LQGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAMKKGENIADTIA   96 (316)
Q Consensus        44 L~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgEs~~Dta~   96 (316)
                      |....+=.++--....++.....++.+-|-|++.=-|-...+...+.+.+.++
T Consensus        60 l~~~~vD~V~i~tp~~~H~~~~~~al~~gkhV~~EKPla~~~~ea~~l~~~a~  112 (387)
T 3moi_A           60 MQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVE  112 (387)
T ss_dssp             HHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHH
T ss_pred             HCCCCCCEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHH
T ss_conf             65999988999089678999999998618956537888799999999999999


No 167
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=26.95  E-value=27  Score=14.09  Aligned_cols=47  Identities=21%  Similarity=0.171  Sum_probs=33.6

Q ss_pred             HHHHHHHHHC----CCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECC
Q ss_conf             3222222201----2221000100103554433013344664201342055327
Q gi|254780300|r  142 ALLDAFAIRH----FKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIA  191 (316)
Q Consensus       142 ~LaDl~Ti~e----~~g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~  191 (316)
                      +..-++.+.+    ...+++|.+++.-|   -++|.......+...|+++.-++
T Consensus       201 g~Gv~~~~~~~~~~~~~~l~g~~vaIQG---~GnVG~~~a~~L~~~Gakvvavs  251 (424)
T 3k92_A          201 AQGVTICIEEAVKKKGIKLQNARIIIQG---FGNAGSFLAKFMHDAGAKVIGIS  251 (424)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCEEEEEC---CSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEEE---CCCHHHHHHHHHHHCCCEEEEEE
T ss_conf             0678899999887459986887799971---57268999999987699799998


No 168
>2vjq_A Formyl-coenzyme A transferase; cytoplasm, class III COA transferase; HET: EPE; 1.8A {Oxalobacter formigenes} PDB: 2vjp_A 2vjm_A* 2vjl_A* 2vjk_A* 1p5h_A 1p5r_A* 2vjn_A* 1t4c_A* 2vjo_A* 2vjm_B* 1vgr_A* 1t3z_A* 1t4c_B* 1vgq_A*
Probab=26.49  E-value=28  Score=14.04  Aligned_cols=12  Identities=8%  Similarity=0.329  Sum_probs=5.0

Q ss_pred             HHHHHHHCCCCEE
Q ss_conf             9998741367146
Q gi|254780300|r   95 IATLNALRPNIIV  107 (316)
Q Consensus        95 a~vls~~~~d~iv  107 (316)
                      ++-|-.- +|+++
T Consensus        83 ~~~Lv~~-aDvvi   94 (428)
T 2vjq_A           83 LEQMIKK-ADVMV   94 (428)
T ss_dssp             HHHHHHH-CSEEE
T ss_pred             HHHHHHH-CCEEE
T ss_conf             9999854-88689


No 169
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=26.16  E-value=28  Score=14.00  Aligned_cols=11  Identities=27%  Similarity=0.383  Sum_probs=5.7

Q ss_pred             CCCCEEEECCC
Q ss_conf             36714652032
Q gi|254780300|r  102 RPNIIVIRHPY  112 (316)
Q Consensus       102 ~~d~iv~R~~~  112 (316)
                      .+|+++-=++.
T Consensus        81 ~~DvVidcTg~   91 (343)
T 2yyy_A           81 DADIVVDGAPK   91 (343)
T ss_dssp             GCSEEEECCCT
T ss_pred             CCCEEEECCCC
T ss_conf             69999991665


No 170
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=25.80  E-value=29  Score=13.96  Aligned_cols=44  Identities=11%  Similarity=0.238  Sum_probs=24.4

Q ss_pred             HHHHHHHHCCCCCCCCCCCC---CCCCC-C----CCCC--HHHHHHHHCCCCEEE
Q ss_conf             99798761352111233332---10133-3----4224--799987413671465
Q gi|254780300|r   64 FEVAGKLLGVHVININTKNS---AMKKG-E----NIAD--TIATLNALRPNIIVI  108 (316)
Q Consensus        64 Fe~A~~~LGg~~i~l~~~~s---~~~kg-E----s~~D--ta~vls~~~~d~iv~  108 (316)
                      +..|+++||..++.+++++.   ++... +    +..|  +...+..- +|+|..
T Consensus        39 l~~aA~~LGi~v~vld~~~~pa~~va~ad~~i~~~~~D~~al~~~a~~-~DvIT~   92 (403)
T 3k5i_A           39 LVESANRLNIQVNVLDADNSPAKQISAHDGHVTGSFKEREAVRQLAKT-CDVVTA   92 (403)
T ss_dssp             HHHHHHHHTCEEEEEESTTCTTGGGCCSSCCEESCTTCHHHHHHHHTT-CSEEEE
T ss_pred             HHHHHHHCCCEEEEEECCCCCHHHCCCCCEEEECCCCCHHHHHHHHHC-CCEEEE
T ss_conf             999999789989999689998665100520697788999999999861-999998


No 171
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=25.50  E-value=29  Score=13.93  Aligned_cols=22  Identities=9%  Similarity=0.022  Sum_probs=9.3

Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf             122332222222012221000100
Q gi|254780300|r  138 HPSQALLDAFAIRHFKGKISNLHI  161 (316)
Q Consensus       138 HP~Q~LaDl~Ti~e~~g~l~~l~i  161 (316)
                      -|+-.++-++  ++..|...+..|
T Consensus       130 NPvd~~~~~~--~k~~g~~~~~vi  151 (333)
T 5mdh_A          130 NPANTNCLTA--SKSAPSIPKENF  151 (333)
T ss_dssp             SSHHHHHHHH--HHTCTTSCGGGE
T ss_pred             CCHHHHHHHH--HHHCCCCCHHEE
T ss_conf             9677999999--996699961258


No 172
>6ldh_A M4 APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.00A {Squalus acanthias} SCOP: c.2.1.5 d.162.1.1 PDB: 8ldh_A* 1ldm_A* 9ldt_A* 9ldb_A* 1i10_A* 3ldh_A* 3h3f_A* 1t2f_A* 1i0z_A* 5ldh_A* 1v6a_A*
Probab=24.65  E-value=30  Score=13.82  Aligned_cols=22  Identities=14%  Similarity=0.070  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             3789999798761352111233
Q gi|254780300|r   59 RTQTSFEVAGKLLGVHVININT   80 (316)
Q Consensus        59 RTR~SFe~A~~~LGg~~i~l~~   80 (316)
                      =.-++|..+...|+.+..-+|.
T Consensus        33 G~~~a~~l~~~~l~~el~L~D~   54 (330)
T 6ldh_A           33 GMACAISILMKDLADEVALVDV   54 (330)
T ss_dssp             HHHHHHHHHTTTCCSEEEEECS
T ss_pred             HHHHHHHHHHCCCCCEEEEEEC
T ss_conf             9999999982799887999918


No 173
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=24.12  E-value=31  Score=13.76  Aligned_cols=100  Identities=16%  Similarity=0.211  Sum_probs=48.9

Q ss_pred             CCCCHHHHHHHHC--CCCEEEECCCCC---HHHHHHCCCCCC--CCCCCCC--CCCCCHH----HHHHH----HHHHHC-
Q ss_conf             4224799987413--671465203210---055420012342--1111234--5663122----33222----222201-
Q gi|254780300|r   90 NIADTIATLNALR--PNIIVIRHPYSG---AVNSLMHKIKGP--SIINAGD--GTHEHPS----QALLD----AFAIRH-  151 (316)
Q Consensus        90 s~~Dta~vls~~~--~d~iv~R~~~~~---~~~~~a~~~s~p--pVINag~--~~~~HP~----Q~LaD----l~Ti~e-  151 (316)
                      +....++.|.+.+  +|++++|....=   ...-.+-...+|  .||++-|  +-++=|.    |.|.+    .+-+.. 
T Consensus       192 PTQhSVk~Lr~~GIqPDiivcRs~~~l~~~~k~KIslfc~V~~~~Vi~~~Dv~sIY~VPl~l~~qgl~~~i~~~L~L~~~  271 (535)
T 3nva_A          192 PLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLEDR  271 (535)
T ss_dssp             HHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHHTTCCGGGEEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCCCC
T ss_pred             CHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf             02899999997589875677604561238999988513577745168627998523404898877879999987099988


Q ss_pred             ------------CCCC---CCCCCEEECCCCCC-----CCHHHHHHHHHHCCCCEEEE
Q ss_conf             ------------2221---00010010355443-----30133446642013420553
Q gi|254780300|r  152 ------------FKGK---ISNLHIAICGDILH-----SRVARSDIMLLNTMGARIRV  189 (316)
Q Consensus       152 ------------~~g~---l~~l~ia~vGD~~~-----~~v~~S~~~~~~~~g~~v~~  189 (316)
                                  +...   -+.++|++||+...     --+..++..+....+.++.+
T Consensus       272 ~~~~~~W~~~~~~~~~~~~~~~V~IaiVGKY~~l~DAY~Si~EAL~HAg~~~~~kv~I  329 (535)
T 3nva_A          272 QVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKL  329 (535)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE
T ss_conf             8546889999866412785660557898520033136766468998656765132369


No 174
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=24.07  E-value=31  Score=13.75  Aligned_cols=21  Identities=19%  Similarity=0.270  Sum_probs=11.0

Q ss_pred             CCCHHHHHHHHHHHHHCCCCC
Q ss_conf             873378999979876135211
Q gi|254780300|r   56 TSTRTQTSFEVAGKLLGVHVI   76 (316)
Q Consensus        56 pStRTR~SFe~A~~~LGg~~i   76 (316)
                      ..+-++.....++.+-|-|++
T Consensus        75 tp~~~H~~~~~~al~~gkhV~   95 (364)
T 3e82_A           75 SPNATHAPLARLALNAGKHVV   95 (364)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEE
T ss_pred             CCHHHHHHHHHHHHHCCCCCH
T ss_conf             877886788889986499541


No 175
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP complex, transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.02  E-value=27  Score=14.13  Aligned_cols=88  Identities=11%  Similarity=0.111  Sum_probs=37.7

Q ss_pred             CCCCCCEEEEEEECCCC---HHHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf             21289769999607873---37899997987613---5211123333210133342247999874136714652032100
Q gi|254780300|r   42 TRLQGLTQINLFLETST---RTQTSFEVAGKLLG---VHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGA  115 (316)
Q Consensus        42 ~~L~gk~~~~lF~kpSt---RTR~SFe~A~~~LG---g~~i~l~~~~s~~~kgEs~~Dta~vls~~~~d~iv~R~~~~~~  115 (316)
                      ..+--|. ++++.+|--   |..-.++.....|.   ..+..+..+     +.....+.++.+..-..|+||+--. .|.
T Consensus        20 ~~~m~kr-~~vI~NP~SG~g~~~~~~~~i~~~l~~~g~~~~i~~T~-----~~g~a~~~a~~~~~~~~d~IVv~GG-DGT   92 (337)
T 2qv7_A           20 SHMMRKR-ARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE-----KIGDATLEAERAMHENYDVLIAAGG-DGT   92 (337)
T ss_dssp             CCSCCEE-EEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC-----STTHHHHHHHHHTTTTCSEEEEEEC-HHH
T ss_pred             CCCCCCE-EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC-----CCCHHHHHHHHHHHCCCCEEEEECC-CHH
T ss_conf             5456635-99999988898757999999999999879969999828-----9226999999987779999999906-569


Q ss_pred             HHHH----HCCCCCCC--CCCCCCCCC
Q ss_conf             5542----00123421--111234566
Q gi|254780300|r  116 VNSL----MHKIKGPS--IINAGDGTH  136 (316)
Q Consensus       116 ~~~~----a~~~s~pp--VINag~~~~  136 (316)
                      +.+.    +.....||  ||.+|+++.
T Consensus        93 v~ev~~gl~~~~~~~plgiiP~GTgN~  119 (337)
T 2qv7_A           93 LNEVVNGIAEKPNRPKLGVIPMGTVND  119 (337)
T ss_dssp             HHHHHHHHTTCSSCCEEEEEECSSCCH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             999999998616796189954999981


No 176
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.71A {Thermus thermophilus HB8}
Probab=23.83  E-value=20  Score=14.99  Aligned_cols=95  Identities=12%  Similarity=0.164  Sum_probs=49.7

Q ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCCCCC---CCCCHHHCCCCCCEEEEEEE
Q ss_conf             21000100103554433013344664201342055327753222112----123433---00584560368622100011
Q gi|254780300|r  154 GKISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI----SNMGVE---VFHDMQKGLKNVDVIMILRM  226 (316)
Q Consensus       154 g~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~----~~~~~~---~~~d~~ea~~~aDvv~~~~~  226 (316)
                      |.+...++..+|-   +++...-+..+..+|+.+...--.....+..    ......   ......+.++.+|+|++.-.
T Consensus       162 ~~v~p~~v~v~Ga---Gvagl~Ai~ta~~lGa~v~~~dv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~DivI~ta~  238 (369)
T 2eez_A          162 PGVAPASVVILGG---GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVL  238 (369)
T ss_dssp             TBBCCCEEEEECC---SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCCCEEEEECC---CEECHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             8877746999579---6003889999841797699814218899887664055123200138788764212047875233


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             3312333444455542023575889998379985995
Q gi|254780300|r  227 QQERIPRSLIPSIREYKHVYSLDEKKLKYAKKDALVM  263 (316)
Q Consensus       227 ~~e~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~m  263 (316)
                      ..-+.            .+--|+++.++..++.+++.
T Consensus       239 ipg~~------------~p~lit~~~v~~mk~gsVIv  263 (369)
T 2eez_A          239 VPGAK------------APKLVTRDMLSLMKEGAVIV  263 (369)
T ss_dssp             -------------------CCSCHHHHTTSCTTCEEE
T ss_pred             CCCCC------------CCHHHHHHHHHCCCCCCEEE
T ss_conf             28988------------84121366785068863899


No 177
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=23.43  E-value=32  Score=13.67  Aligned_cols=139  Identities=13%  Similarity=0.121  Sum_probs=74.7

Q ss_pred             CHHHHHHHHHHHHCCCCC-----------CCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCC-CC--------
Q ss_conf             122332222222012221-----------0001001035544330133446642013420553277532-22--------
Q gi|254780300|r  138 HPSQALLDAFAIRHFKGK-----------ISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITL-LP--------  197 (316)
Q Consensus       138 HP~Q~LaDl~Ti~e~~g~-----------l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~-~~--------  197 (316)
                      ..+|+|.-+|-..+.-+.           .+=.+|+.+|-   +.+..++...+..-|++|++.-+..- +.        
T Consensus       281 ~~a~~~i~~f~~~~~~~k~~~~~~~~~~~~~i~kv~ViGa---G~MG~gIA~~~a~~G~~V~l~D~~~~~l~~~~~~~~~  357 (725)
T 2wtb_A          281 DTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGG---GLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKA  357 (725)
T ss_dssp             HHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEEECC---SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC---CHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf             4655679999977676530344446777756777999897---6899999999986599815735575788878989999


Q ss_pred             ---CCCC------------CCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCC--------CCHHHHH
Q ss_conf             ---1121------------2343300584560368622100011331233344445554202357--------5889998
Q gi|254780300|r  198 ---KDIS------------NMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYS--------LDEKKLK  254 (316)
Q Consensus       198 ---~~~~------------~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~~~~~~~~~~~~~~~~~--------v~~~~l~  254 (316)
                         +...            ...+..+.|+ ++++++|.|+-........+.+.....+++..+-.        +.-..+.
T Consensus       358 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~l~~~DlViEav~E~l~iK~~v~~~le~~~~~~aIlasNTS~l~i~~la  436 (725)
T 2wtb_A          358 NLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIG  436 (725)
T ss_dssp             HHHHTTC----CTTHHHHTTTSEEEESSS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHT
T ss_pred             HHHHHHHHCCCHHHHHHHHHHCCCCCCCH-HHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf             99998761310078899998315776777-77446776887044530012568999986467606998357644789885


Q ss_pred             H-C--CCCCEEECCC-CCCC--------CCCCCHHHHC
Q ss_conf             3-7--9985995589-9876--------8744767976
Q gi|254780300|r  255 Y-A--KKDALVMHPG-PINR--------NYEISSSVAD  280 (316)
Q Consensus       255 ~-a--~~~ai~mHcL-P~~R--------g~Ev~~~v~d  280 (316)
                      . +  +...+-||.. |++.        |.+.++++++
T Consensus       437 ~~~~~p~R~~g~HffnP~~~m~LVEii~g~~Ts~~~i~  474 (725)
T 2wtb_A          437 ERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIV  474 (725)
T ss_dssp             TTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHH
T ss_pred             HCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             11467132897403587322642123577775437899


No 178
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=23.11  E-value=32  Score=13.63  Aligned_cols=175  Identities=17%  Similarity=0.088  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC------CCCHHHH--HHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999999999999644204877521289769999607------8733789--9997987613521112333321013334
Q gi|254780300|r   19 DVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLE------TSTRTQT--SFEVAGKLLGVHVININTKNSAMKKGEN   90 (316)
Q Consensus        19 el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~k------pStRTR~--SFe~A~~~LGg~~i~l~~~~s~~~kgEs   90 (316)
                      .+...+.+|..+--+-.-.+   -++=|-..+..+..      |+.|.|+  +|..++..|+|..+  ..-+...    +
T Consensus        52 ~l~ev~~LA~~MT~K~Al~~---lp~GGgKggI~~~p~~~~~~~~e~e~l~R~~~~~l~~l~G~~i--~apDvgt----~  122 (355)
T 1c1d_A           52 ALTDAGKLAGAMTLKMAVSN---LPMGGGKSVIALPAPRHSIDPSTWARILRIHAENIDKLSGNYW--TGPDVNT----N  122 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CSCEEEEEEEECSSCGGGCCHHHHHHHHHHHHHHHHHTTTSEE--EEECTTC----C
T ss_pred             HHHHHHHHHHHHHHHHHHHC---CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCC----C
T ss_conf             99999999999999999818---9988715488328743557878999999999999887517663--3456798----8


Q ss_pred             CCCHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CC--CCCCCCCEEECC
Q ss_conf             2247999874136714652032100554200123421111234566312233222222201---22--210001001035
Q gi|254780300|r   91 IADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRH---FK--GKISNLHIAICG  165 (316)
Q Consensus        91 ~~Dta~vls~~~~d~iv~R~~~~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e---~~--g~l~~l~ia~vG  165 (316)
                      ..|-+.+...|.                   +....|+-..|.... -+.-+..=++++++   ..  ++++|++++.-|
T Consensus       123 ~~~m~~i~d~~~-------------------~vtgkp~~~gg~~~~-~~aTg~Gv~~~~~~~~~~~g~~~l~g~~VaIQG  182 (355)
T 1c1d_A          123 SADMDTLNDTTE-------------------FVFGRSLERGGAGSS-AFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQG  182 (355)
T ss_dssp             HHHHHHHHHHCS-------------------CBCCCCGGGTSCCCC-HHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEEC
T ss_pred             HHHHHHHHHHCC-------------------EEEECCCCCCCCCCC-CCCEEEEEEEEHHHHHHHCCCCCCCCCEEEEEC
T ss_conf             899999853314-------------------323025235898887-761357788722789987289986687799981


Q ss_pred             CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHC-CCCCCEEEEEEE
Q ss_conf             5443301334466420134205532775322211212343300584560-368622100011
Q gi|254780300|r  166 DILHSRVARSDIMLLNTMGARIRVIAPITLLPKDISNMGVEVFHDMQKG-LKNVDVIMILRM  226 (316)
Q Consensus       166 D~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~d~~ea-~~~aDvv~~~~~  226 (316)
                         -+||..+....+...|+++.++....-........+.+.. ++++. -.++||++.--.
T Consensus       183 ---fGnVG~~~a~~L~~~Ga~vv~~d~d~~~i~~~~~~~~~~i-~~~~~~~~~~DIliPcA~  240 (355)
T 1c1d_A          183 ---LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAM  240 (355)
T ss_dssp             ---CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSC
T ss_pred             ---CCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCC-CHHHCCCCCCEEEEECCC
T ss_conf             ---3436789998899729898741577887535675298302-554506326318976554


No 179
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=22.71  E-value=33  Score=13.58  Aligned_cols=12  Identities=8%  Similarity=0.407  Sum_probs=5.9

Q ss_pred             CCCEEEECCCCC
Q ss_conf             671465203210
Q gi|254780300|r  103 PNIIVIRHPYSG  114 (316)
Q Consensus       103 ~d~iv~R~~~~~  114 (316)
                      +|+|++-.+...
T Consensus        72 ad~iiiavps~~   83 (335)
T 1txg_A           72 AEVVLLGVSTDG   83 (335)
T ss_dssp             CSEEEECSCGGG
T ss_pred             CCEEEECCCHHH
T ss_conf             875897376899


No 180
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=22.21  E-value=33  Score=13.52  Aligned_cols=13  Identities=15%  Similarity=0.646  Sum_probs=6.2

Q ss_pred             HHHHHCCCCEEEE
Q ss_conf             9874136714652
Q gi|254780300|r   97 TLNALRPNIIVIR  109 (316)
Q Consensus        97 vls~~~~d~iv~R  109 (316)
                      .+..+.+|++++-
T Consensus        74 ~l~~~~~Dliv~~   86 (212)
T 1jkx_A           74 EIDMYAPDVVVLA   86 (212)
T ss_dssp             HHGGGCCSEEEES
T ss_pred             HHHHHCCCEEEEE
T ss_conf             9997099999993


No 181
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=21.87  E-value=34  Score=13.48  Aligned_cols=103  Identities=8%  Similarity=0.094  Sum_probs=53.4

Q ss_pred             CCCEEECCCCCCCCHHHHHHHHHHC-CCC-EEEECCCCCC----CCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHH
Q ss_conf             0100103554433013344664201-342-0553277532----221121234330058456036862210001133123
Q gi|254780300|r  158 NLHIAICGDILHSRVARSDIMLLNT-MGA-RIRVIAPITL----LPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERI  231 (316)
Q Consensus       158 ~l~ia~vGD~~~~~v~~S~~~~~~~-~g~-~v~~~~P~~~----~~~~~~~~~~~~~~d~~ea~~~aDvv~~~~~~~e~~  231 (316)
                      ..+++++|-   +..++..+.++.. ++. ++++..+..-    +.+.....++....++.+++.++|+|++..-..+- 
T Consensus       125 ~~~l~iiG~---G~QA~~~l~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiI~taT~s~~P-  200 (322)
T 1omo_A          125 SSVFGFIGC---GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKP-  200 (322)
T ss_dssp             CCEEEEECC---SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSC-
T ss_pred             CCEEEEECC---CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCCCCC-
T ss_conf             857999668---3567899999986524426887248989999999988751775333223330556389952788884-


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCCC-CCCCCHHHHCCC
Q ss_conf             334444555420235758899983799859955899876-874476797699
Q gi|254780300|r  232 PRSLIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINR-NYEISSSVADGS  282 (316)
Q Consensus       232 ~~~~~~~~~~~~~~~~v~~~~l~~a~~~ai~mHcLP~~R-g~Ev~~~v~d~~  282 (316)
                                +     +..   +..++++.+.+-..-.. ..|++.+++..-
T Consensus       201 ----------~-----~~~---~~l~~g~~i~~iGs~~p~~~Eld~~~~~~a  234 (322)
T 1omo_A          201 ----------V-----VKA---EWVEEGTHINAIGADGPGKQELDVEILKKA  234 (322)
T ss_dssp             ----------C-----BCG---GGCCTTCEEEECSCCSTTCCCBCHHHHHTE
T ss_pred             ----------C-----CCH---HHCCCCCEEEEECCCCCCCCEECHHHHCCC
T ss_conf             ----------5-----466---665799879972456678736378995227


No 182
>1oao_A CODH, carbon monoxide dehydrogenase beta subunit; electron transfer, oxidoreductase, acetyl-COA formation, WOOD/ljungdahl pathway; 1.90A {Moorella thermoacetica} SCOP: e.26.1.2 PDB: 1mjg_A 2z8y_A 3i01_A 3i04_A
Probab=21.78  E-value=34  Score=13.46  Aligned_cols=65  Identities=14%  Similarity=0.127  Sum_probs=35.2

Q ss_pred             CCCCCCCCCCCCC-CCHHHHHHHHHHHHCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf             3421111234566-312233222222201222-10001001035544330133446642013420553277
Q gi|254780300|r  124 KGPSIINAGDGTH-EHPSQALLDAFAIRHFKG-KISNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAP  192 (316)
Q Consensus       124 s~ppVINag~~~~-~HP~Q~LaDl~Ti~e~~g-~l~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P  192 (316)
                      -.|||+|.|.... +|-.++.   ..+.+.+| ++..|-++.+-.-..+-=+-+-...+-.+|..+++ +|
T Consensus       540 gIPpVL~~GsCvDn~r~~~~a---~aLA~~lg~din~LP~~~~apew~eqKAvaI~~~~lalGI~~~l-Gp  606 (674)
T 1oao_A          540 GLPPVFHMGSCVDNSRAVDLL---MAMANDLGVDTPKVPFVASAPEAMSGKAAAIGTWWVSLGVPTHV-GT  606 (674)
T ss_dssp             CCCSEEEEESGGGHHHHHHHH---HHHHHHHTSCGGGSCEEEEETTCCSHHHHHHHHHHHHTTCEEEE-SS
T ss_pred             CCCCEEEEECCHHHHHHHHHH---HHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCEEE-CC
T ss_conf             999861223567179999999---99999868994348835665157779999999999981992788-99


No 183
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=21.32  E-value=35  Score=13.40  Aligned_cols=27  Identities=4%  Similarity=-0.111  Sum_probs=11.6

Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             54200123421111234566312233222
Q gi|254780300|r  117 NSLMHKIKGPSIINAGDGTHEHPSQALLD  145 (316)
Q Consensus       117 ~~~a~~~s~ppVINag~~~~~HP~Q~LaD  145 (316)
                      .+.++......|.++|  ...-|+..++=
T Consensus       109 ~~~a~~~g~~~~~~~G--~~pg~~~~~a~  135 (450)
T 1ff9_A          109 DQAAKDAGITVMNEIG--LDPGIDHLYAI  135 (450)
T ss_dssp             HHHHHHTTCEEECSCB--BTTBHHHHHHH
T ss_pred             HHHHHHCCEEEEECCC--CCCCHHHHHHH
T ss_conf             7887415837962677--78735789999


No 184
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=20.97  E-value=35  Score=13.36  Aligned_cols=73  Identities=18%  Similarity=0.255  Sum_probs=28.8

Q ss_pred             CCCCCCCCCHHHHHHHHCCCCEEEECCC--CC--HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             0133342247999874136714652032--10--0554200123421111234566312233222222201222100010
Q gi|254780300|r   85 MKKGENIADTIATLNALRPNIIVIRHPY--SG--AVNSLMHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLH  160 (316)
Q Consensus        85 ~~kgEs~~Dta~vls~~~~d~iv~R~~~--~~--~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~Ti~e~~g~l~~l~  160 (316)
                      +.+|++.   +..++.++.|++++=+-+  .+  .+..+.+.+..| ++.|=......+.....--+++.|    ..|+|
T Consensus        71 ~~~g~~~---~~~mn~~g~Da~~lGNHEFD~G~~~l~~~~~~~~fp-~l~aNv~~~~~~~~~~~~~~~i~~----~~G~k  142 (509)
T 3ive_A           71 LTKGKAI---IDIMNTMPFDAVTIGNHEFDHGWDNTLLQLSQAKFP-IVQGNIFYQNSSKSFWDKPYTIIE----KDGVK  142 (509)
T ss_dssp             TTTTHHH---HHHHTTSCCSEECCCGGGGTTCHHHHHHHHTTCSSC-BCCCSEEETTSCCBSSSCSEEEEE----ETTEE
T ss_pred             HHCCHHH---HHHHHCCCCCEEEECHHHCCCCHHHHHHHHHHCCCC-EEECCCCCCCCCCCCCCCCEEEEE----ECCEE
T ss_conf             7599899---999874599899984451365889999999758997-784454323454646788869999----89989


Q ss_pred             EEECC
Q ss_conf             01035
Q gi|254780300|r  161 IAICG  165 (316)
Q Consensus       161 ia~vG  165 (316)
                      |+++|
T Consensus       143 IgviG  147 (509)
T 3ive_A          143 IGVIG  147 (509)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99998


No 185
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=20.74  E-value=36  Score=13.33  Aligned_cols=56  Identities=14%  Similarity=0.285  Sum_probs=33.5

Q ss_pred             CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHH-HHHHHHHC
Q ss_conf             77417822389999999999999999644204877521289769999607873378999-97987613
Q gi|254780300|r    6 LYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSF-EVAGKLLG   72 (316)
Q Consensus         6 ~k~fL~~~dl~~~el~~ll~~A~~~k~~~~~~~~~~~~L~gk~~~~lF~kpStRTR~SF-e~A~~~LG   72 (316)
                      ++.|+. ++++.++|..+++.|-.      ...+....-.+..+.=||--|..    || +.|++-||
T Consensus        59 ~~~f~~-~~~~~~~l~~~~~~a~~------~~~~~~~~~~~~~~lELfhGPT~----sFKD~a~~~l~  115 (428)
T 1vb3_A           59 LSAFIG-DEIPQEILEERVRAAFA------FPAPVANVESDVGCLELFHGPTL----AFKDFGGRFMA  115 (428)
T ss_dssp             HHHHHG-GGSCHHHHHHHHHHHCC------SCCCEEEEETTEEEEECCCSTTS----BTHHHHHHHHH
T ss_pred             HHHHCC-CCCCHHHHHHHHHHHCC------CCCCCEEECCCCEEEEEEECCCC----CHHHHHHHHHH
T ss_conf             998657-88999999999998638------88875341388568997348985----42416899999


No 186
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.59  E-value=35  Score=13.38  Aligned_cols=22  Identities=9%  Similarity=0.158  Sum_probs=8.7

Q ss_pred             CCHHHHHHHHHHCCCCEEEECC
Q ss_conf             3013344664201342055327
Q gi|254780300|r  170 SRVARSDIMLLNTMGARIRVIA  191 (316)
Q Consensus       170 ~~v~~S~~~~~~~~g~~v~~~~  191 (316)
                      +++...+...+...|.++.++.
T Consensus        15 g~~g~~la~~L~~~g~~vvvid   36 (141)
T 3llv_A           15 EAAGVGLVRELTAAGKKVLAVD   36 (141)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CHHHHHHHHHHHHCCCCEEEEE
T ss_conf             9899999999997799489995


No 187
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=20.37  E-value=36  Score=13.28  Aligned_cols=65  Identities=14%  Similarity=0.238  Sum_probs=36.7

Q ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC-CCCCCC-CC---C---HHH-CCCCCCEEEEE
Q ss_conf             001001035544330133446642013420553277532221121-234330-05---8---456-03686221000
Q gi|254780300|r  157 SNLHIAICGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDIS-NMGVEV-FH---D---MQK-GLKNVDVIMIL  224 (316)
Q Consensus       157 ~~l~ia~vGD~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~-~~~~~~-~~---d---~~e-a~~~aDvv~~~  224 (316)
                      ...+|..+|   .+++..+....+...|.+++++.+..-..+... ..++.+ .-   +   +++ .+.+||.++..
T Consensus        18 ~~~~IiI~G---~g~~G~~ia~~L~~~g~~vvvId~d~~~~~~l~~~~~~~~i~GD~~d~~~L~~a~i~~a~~vI~~   91 (155)
T 2g1u_A           18 KSKYIVIFG---CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCCEEEEEC---CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             CCCEEEEEC---CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHCCHHHCCEEEEC
T ss_conf             598199989---98999999999997899799994688984431203341369777600788874182246899991


No 188
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=20.36  E-value=36  Score=13.27  Aligned_cols=18  Identities=11%  Similarity=0.100  Sum_probs=8.3

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             868775699999999999
Q gi|254780300|r  287 QYQVEMGVAVRMAIIKEL  304 (316)
Q Consensus       287 ~~Qa~Nrl~~~~AlL~~~  304 (316)
                      ++++-.-+.+-.|+....
T Consensus       322 ~~da~~~~~i~~A~~~S~  339 (357)
T 3ec7_A          322 SWDGYLAAVTADACVKSQ  339 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999


No 189
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=20.22  E-value=37  Score=13.26  Aligned_cols=96  Identities=17%  Similarity=0.190  Sum_probs=49.5

Q ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CCCCHHHHHHHHC---CCCEEEECCC------
Q ss_conf             897699996078733789999798761352111233332101333---4224799987413---6714652032------
Q gi|254780300|r   45 QGLTQINLFLETSTRTQTSFEVAGKLLGVHVININTKNSAMKKGE---NIADTIATLNALR---PNIIVIRHPY------  112 (316)
Q Consensus        45 ~gk~~~~lF~kpStRTR~SFe~A~~~LGg~~i~l~~~~s~~~kgE---s~~Dta~vls~~~---~d~iv~R~~~------  112 (316)
                      +.|.++.+=---|--|++|++.| .+++|..|.  .++.|+=||=   |-+-+.....+.-   .|++-.-...      
T Consensus         2 k~kii~I~GpTasGKS~la~~LA-~~~~~eIIs--aDS~QvYk~l~IgTaKps~~e~~~ipHhlid~~~p~e~~sv~~f~   78 (322)
T 3exa_A            2 KEKLVAIVGPTAVGKTKTSVMLA-KRLNGEVIS--GDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQ   78 (322)
T ss_dssp             CCEEEEEECCTTSCHHHHHHHHH-HTTTEEEEE--CCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHH-HHCCCEEEE--EEHHHHCCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHH
T ss_conf             98679998987216999999999-987996996--212765499976778999999907997741573788742299878


Q ss_pred             ---CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             ---10055420012342111123456631223322222
Q gi|254780300|r  113 ---SGAVNSLMHKIKGPSIINAGDGTHEHPSQALLDAF  147 (316)
Q Consensus       113 ---~~~~~~~a~~~s~ppVINag~~~~~HP~Q~LaDl~  147 (316)
                         ...+.+..+...+| ||=+|+|.+   .|+|.+=+
T Consensus        79 ~~a~~~i~~i~~r~k~P-IlVGGTglY---l~aLl~g~  112 (322)
T 3exa_A           79 DLATPLITEIHERGRLP-FLVGGTGLY---VNAVIHQF  112 (322)
T ss_dssp             HHHHHHHHHHHHTTCEE-EEESCCHHH---HHHHHHTC
T ss_pred             HHHHHHHHHHHHCCCCE-EEEECCHHH---HHHHHCCC
T ss_conf             78999999999769980-999483889---99998185


Done!