PSIBLAST alignment of GI: 254780300 and protein with PDB id: 1akm
>gi|3212448|pdb|1AKM|A Chain A, Ornithine Transcarbamylase From Escherichia Coli Length = 333
>gi|3212449|pdb|1AKM|B Chain B, Ornithine Transcarbamylase From Escherichia Coli Length = 333
>gi|3212450|pdb|1AKM|C Chain C, Ornithine Transcarbamylase From Escherichia Coli Length = 333
>gi|9256873|pdb|1DUV|G Chain G, Crystal Structure Of E. Coli Ornithine Transcarbamoylase Complexed With Ndelta-L-Ornithine-Diaminophosphinyl-N- Sulphonic Acid (Psorn) Length = 333
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 61/335 (18%), Positives = 112/335 (33%), Gaps = 35/335 (10%)
Query: 2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQ 61
F +F+ + D + ++N LL A + K +L G +F + STRT+
Sbjct: 1 SGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKS-GKEEAKLTGKNIALIFEKDSTRTR 59
Query: 62 TSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMH 121
SFEVA G V + S + E+I DT L + I R V +L
Sbjct: 60 CSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVL-GRMYDGIQYRGYGQEIVETLAE 118
Query: 122 KIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDI-LHSRVARSDIMLL 180
P HP+Q L D ++ + + + + + S +
Sbjct: 119 YASVPVWNGL--TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAA 176
Query: 181 NTMGARIRVIAPITLLPK-----------DISNMGVEVFHDMQKGLKNVDVIMILRMQQE 229
G +R++AP P+ + + + D+ KG++ D I
Sbjct: 177 ALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSM 236
Query: 230 RIPRSLIPSIREYKHVYSLDEKKLKYA-KKDALVMHPGPI------------------NR 270
+ Y ++ K ++ + +H P +
Sbjct: 237 GEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHG 296
Query: 271 NYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL 305
E++ V + + SI+ Q E + A++ L
Sbjct: 297 GMEVTDEVFESAASIVFDQAENRMHTIKAVMVATL 331