PSIBLAST alignment of GI: 254780300 and protein with PDB id: 1dxh
>gi|13096652|pdb|1DXH|A Chain A, Catabolic Ornithine Carbamoyltransferase From Pseudomonas Aeruginosa Length = 335
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/337 (19%), Positives = 117/337 (34%), Gaps = 35/337 (10%)
Query: 2 YSFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQ 61
++ N +++ S +++ YLLD + + + K L+ +F +TSTRT+
Sbjct: 2 FNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKY-TGTEQQHLKRKNIALIFEKTSTRTR 60
Query: 62 TSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMH 121
+FEVA G +V I+ +S + E++ DT L + I R V L
Sbjct: 61 CAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGR-MYDAIEYRGFKQEIVEELAK 119
Query: 122 KIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLN 181
P HP+Q L D +R K + + + S +++
Sbjct: 120 FAGVPVFNGL--TDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGA 177
Query: 182 TMGARIRVIAPITLLPKDISNMGVEVF-----------HDMQKGLKNVDVIMILRMQQER 230
+G +R+ AP L P D + F D ++ +K VD +
Sbjct: 178 KLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMG 237
Query: 231 IPRSLIPSIREYKHVYSLDEKKLKYA-KKDALVMHPGPINR------------------- 270
P + Y ++ + +K A MH P
Sbjct: 238 EPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLAN 297
Query: 271 NYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLEN 307
E++ V + +I Q E + AI+ L +
Sbjct: 298 GIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLAD 334