PSIBLAST alignment of GI: 254780300 and protein with PDB id: 1vlv

>gi|55670454|pdb|1VLV|A Chain A, Crystal Structure Of Ornithine Carbamoyltransferase (Tm1097) From Thermotoga Maritima At 2.25 A Resolution Length = 325
 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/317 (19%), Positives = 116/317 (36%), Gaps = 17/317 (5%)

Query: 1   MY-SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTR 59
           M  +    + +T+ D S +++ YLLD + +    ++     T R +G+T   +F + STR
Sbjct: 13  MSVNLKGRSLLTLLDFSPEEIRYLLDISKQVK-MENRSKLRTERFKGMTLAMIFEKRSTR 71

Query: 60  TQTSFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSL 119
           T+ +FE A    G H I ++  +  +   E++ DT   L     + I+ R      V  L
Sbjct: 72  TRLAFETAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGR-MVDAIMFRGYKQETVEKL 130

Query: 120 MHKIKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIML 179
                 P           HP+QAL D   I    G++  + +   GD  ++      I  
Sbjct: 131 AEYSGVPVYNGL--TDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIAC 188

Query: 180 LNTMGARIRVIAPITLLPKDISNMGVE----------VFHDMQKGLKNVDVIMILRMQQE 229
                  +           D+     E             ++++ L   DV+        
Sbjct: 189 AKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASM 248

Query: 230 RIPRSLIPSIREYKHVYSLDEKKLKYA-KKDALVMHPGPINRNYEISSSVADGSQSIIQY 288
                           Y ++E+ ++   K + + MH  P  +  E++  V +G QS +  
Sbjct: 249 GE-EDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWD 307

Query: 289 QVEMGVAVRMAIIKELL 305
           + E       A++   L
Sbjct: 308 EAENRKHTIKAVMIATL 324