RPSBLAST alignment for GI: 254780300 and conserved domain: TIGR00658

>gnl|CDD|129743 TIGR00658, orni_carb_tr, ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily. Length = 304

 Score =  127 bits (320), Expect = 5e-30
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 24/312 (7%)

Query: 9   FVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVAG 68
            +++ DLS +++ YLL  A +  +K         +L+G T   +F + STRT+ SFEVA 
Sbjct: 3   LLSLLDLSPEEIRYLLQLA-KKLKKGKKKGKEHKKLKGKTLALIFEKPSTRTRVSFEVAA 61

Query: 69  KLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPSI 128
             LG H + +N  +  + +GE+I DT   L+     I+   + +       + K     +
Sbjct: 62  YQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEE--LAKYASVPV 119

Query: 129 INAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARIR 188
           IN G     HP QAL D   I    GK+  + +   GD   + V  S ++    +G  + 
Sbjct: 120 IN-GLTDLFHPCQALADLLTIIEHFGKLKGVKVVYVGD--GNNVCNSLMLAGAKLGMDVV 176

Query: 189 VIAPITLLP---------KDISNMG--VEVFHDMQKGLKNVDVIMI---LRMQQERIPRS 234
           V  P    P         +     G  VE+ HD  + +K  DVI     + M +E     
Sbjct: 177 VATPEGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTDVWVSMGEEDKKEE 236

Query: 235 LIPSIREYKHVYSLDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGV 294
            +   R Y+    ++E+ ++ AK + + MH  P +R  E++  V +G  SI+  Q E  +
Sbjct: 237 RLKLFRPYQ----VNEELMELAKPEVIFMHCLPAHRGEEVTDEVIEGPHSIVFDQAENRL 292

Query: 295 AVRMAIIKELLE 306
             + A++  LL 
Sbjct: 293 HAQKAVMVALLG 304