RPSBLAST alignment of GI: 254780300 and protein with PDBid: 1duv
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A* Length = 333
Score = 148 bits (375), Expect = 1e-36
Identities = 56/334 (16%), Positives = 111/334 (33%), Gaps = 35/334 (10%)
Query: 3 SFPLYNFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQT 62
F +F+ + D + ++N LL A + + +L G +F + STRT+
Sbjct: 2 GFYHKHFLKLLDFTPAELNSLLQLAAK-LKADKKSGKEEAKLTGKNIALIFEKDSTRTRC 60
Query: 63 SFEVAGKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHK 122
SFEVA G V + S + E+I DT L + I +
Sbjct: 61 SFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVE---TLA 117
Query: 123 IKGPSIINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNT 182
+ G HP+Q L D ++ + + + + ++
Sbjct: 118 EYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAA 177
Query: 183 M-GARIRVIAPITLLPKDI-----------SNMGVEVFHDMQKGLKNVDVIMILRMQQER 230
+ G +R++AP P+ + + + D+ KG++ D I
Sbjct: 178 LTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMG 237
Query: 231 IPRSLIPSIREYKHVYSLDEKKLK-YAKKDALVMHPGP------------------INRN 271
+ Y ++ K ++ + +H P ++
Sbjct: 238 EAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGG 297
Query: 272 YEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL 305
E++ V + + SI+ Q E + A++ L
Sbjct: 298 MEVTDEVFESAASIVFDQAENRMHTIKAVMVATL 331