RPSBLAST alignment of GI: 254780300 and protein with PDBid: 1zq6
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 2g6a_A* 2g65_A* 2g6c_A* 2g68_A* Length = 359
Score = 185 bits (469), Expect = 1e-47
Identities = 69/336 (20%), Positives = 125/336 (37%), Gaps = 44/336 (13%)
Query: 8 NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVA 67
+F+ +D S +++ LL +A + + K + L+G + +F S RT+TSFE+
Sbjct: 25 HFLNTQDWSRAELDALLTQAALFKRNKLG-----SELKGKSIALVFFNPSMRTRTSFELG 79
Query: 68 GKLLGVHVININTKNSAMK---------KGENIADT--IATLNALRPNIIVIRHPYSGAV 116
LG H + + A G+ +A + ++I +R
Sbjct: 80 AFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVD 139
Query: 117 NSLMHK-------IKGPSIINAGDGTHEHPSQALLDAFAIRH------FKGKISNLHIAI 163
S + K + T HP Q L A A++ +GK L
Sbjct: 140 WSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTPDLRGKKYVLTWTY 199
Query: 164 CGDILHSRVARSDIMLLNTMGARIRVIAPITLLPKDI------------SNMGVEVFHDM 211
L++ VA S + + MG + ++ P D S ++V HD+
Sbjct: 200 HPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDI 259
Query: 212 QKGLKNVDVIMILRMQQERIPRSLIPS--IREYKHVYSLDEKKLKYAKKDALVMHPGPIN 269
DV+ + P IR+ + +DE+K+ + + H P+
Sbjct: 260 DSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMA-LTNNGVFSHCLPLR 318
Query: 270 RNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL 305
RN + + +V D I + E + V+ AI+ L+
Sbjct: 319 RNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALV 354