RPSBLAST alignment of GI: 254780300 and protein with PDBid: 2ef0

>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8} Length = 301
 Score =  185 bits (469), Expect = 1e-47
 Identities = 58/299 (19%), Positives = 114/299 (38%), Gaps = 8/299 (2%)

Query: 8   NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVA 67
           + +       +++  LLD A +  +++         L+G     LF + S RT+T+ EVA
Sbjct: 11  DLLDFSGYGPKELQALLDLAEQLKRERYRGED----LKGKVLALLFEKPSLRTRTTLEVA 66

Query: 68  GKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPS 127
              LG H + ++ K   + + E + D    L      I   R      V +L    K P 
Sbjct: 67  MVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGI-AARVFRHETVEALARHAKVPV 125

Query: 128 IINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARI 187
           +    D    HP QAL D   ++   G ++ L +A  GD  +   +  ++  L  +  R+
Sbjct: 126 VNALSD--RAHPLQALADLLTLKEVFGGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRV 183

Query: 188 RVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYS 247
                    P  +        HD ++       +                 +R+++  + 
Sbjct: 184 ATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLRDFQG-FQ 242

Query: 248 LDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELLE 306
           ++ + LK  + + + +H  P +   E +     G +S +  Q E  +    A++  LL+
Sbjct: 243 VNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRVFDQAENRLHTAKAVLLTLLK 301