HHsearch alignment for GI: 254780301 and conserved domain: COG1001

Probab=99.96  E-value=1.8e-27  Score=195.05  Aligned_cols=88  Identities=26%  Similarity=0.406  Sum_probs=67.4

Q ss_pred             CEEEECCEEECCCCCEEEEEEEEEECCEEEEE-CCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHH
Q ss_conf             26996429999888850001089979999983-17865566678877998879889517271411478999831143788
Q gi|254780301|r    3 SFVLNNTRIIDPSRDIDEVGAIIVENGIILAA-GADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITT   81 (431)
Q Consensus         3 ~llI~n~~iid~~~~~~~~~~I~I~~gkI~~I-g~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~   81 (431)
T Consensus        25 dlv~kng~ivdv~~gei~~~dIaI~~grI~~v~~~~----~-~e~~~~iDa~g~yivPGfID~H~HIESSm~tP----~~   95 (584)
T COG1001          25 DLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEY----R-AEATEVIDAAGRYIVPGFIDAHLHIESSMLTP----SE   95 (584)
T ss_pred             CEEEECCEEEEEEECCEEEEEEEEECCEEEEEECCC----C-CCCCEEECCCCCEECCCEECCCEECCCCCCCH----HH
T ss_conf             789989899875405088610899899999852677----7-66653761789886566110321010036689----99


Q ss_pred             HHHHHHCCCCCCCCCCCC
Q ss_conf             999987078732124545
Q gi|254780301|r   82 LSKEAVAGGITSIILMPL   99 (431)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~   99 (431)
T Consensus        96 FA~~Vlp~GtTtvV~DPH  113 (584)
T COG1001          96 FARAVLPHGTTTVVSDPH  113 (584)
T ss_pred             HHHHHHCCCCEEEEECCH
T ss_conf             998865178558961728