HHsearch alignment for GI: 254780301 and conserved domain: PRK00369
>PRK00369 pyrC dihydroorotase; Provisional.
Probab=100.00 E-value=3e-39 Score=270.98 Aligned_cols=372 Identities=21% Similarity=0.270 Sum_probs=192.2
Q ss_pred CEEEECCEEECCCCCEEEEEEEEE-ECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHH
Q ss_conf 269964299998888500010899-7999998317865566678877998879889517271411478999831143788
Q gi|254780301|r 3 SFVLNNTRIIDPSRDIDEVGAIIV-ENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITT 81 (431)
Q Consensus 3 ~llI~n~~iid~~~~~~~~~~I~I-~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~ 81 (431)
T Consensus 3 ~~~~~~~~~~~~--~~~---~~~~~~~~~i~~~~~~~-------~~~iidAkG~~VlPG~ID~HvH~rePG~~~kEd~~s 70 (393)
T PRK00369 3 DMWIKGKAYLGD--EIA---EICGNFDRRIKEIRFRC-------KPDLDLRRGSLILPGVIDMHVHLRGLKLSYKEDVAS 70 (393)
T ss_pred CEEEECCCCCCC--CCE---EEEECCEEEHHHHHHCC-------CCCEEECCCCEEECCEEEECCCCCCCCCCCCCCHHH
T ss_conf 189975511088--535---99840003565443026-------765684789988069888044469999876575999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99998707873212454556643331667777677664310122321000134432222222100000112222343332
Q gi|254780301|r 82 LSKEAVAGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMS 161 (431)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (431)
T Consensus 71 gt~AAaaGGvTtv~~mPnt~P~~~~~~~~~~~~-~~~~~~s~vd~~~~~~v~--~~---~~~l~~lg~~g~k~f~----- 139 (393)
T PRK00369 71 ATSEAAYGGITLVADMPNTVPPLNTPEAIKEKL-AELENYSRVDYGVYSGVT--KE---YEEVDKLPIAGYKIYP----- 139 (393)
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH-HHHCCCCCCCEEEEEECC--CC---HHHHHHCCCCEEEEEC-----
T ss_conf 999998099489998999999989899999999-985648724689994216--74---5557646697599988-----
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 22211012456765421012222333222222211246753100122221000012355556654320001112223331
Q gi|254780301|r 162 IHDTQVLLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYHASVISI 241 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (431)
T Consensus 140 --~d~~~~~~~~~~~~~~~l~~~HaE~~~~~~------~~~~------~~r~~~~E~~ai--~~~--~~~ar~Hi~h~Ss 201 (393)
T PRK00369 140 --EDLEREETKRVLEKSKKLKILHPEIPLALK------GLRR------LRRNCWAEIAAL--ELV--KGAANVHITHASN 201 (393)
T ss_pred --CCCCHHHHHHHHHHCCCCEEECCCCHHHHH------HHHH------HHCCHHHHHHHH--HHH--HHCCCEEEEECCC
T ss_conf --888789999999867997099478877763------5255------207458999999--998--6149699993684
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12110011110012223222222222223222211100000011122222222222223344311113444545432222
Q gi|254780301|r 242 PQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKL 321 (431)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (431)
T Consensus 202 ~e~ir~A---K~~G--~t~Ev~phhL~l~~----e~~~~~kv~PPLR~~~D~~aL~~~l~d--ID~IaSDHaPh~~eeK~ 270 (393)
T PRK00369 202 PETVRIA---KKLG--FTVDITPHHLLVDG----ERDCLSKVNPPIRDYGERLKLLKALFE--VDAVASDHAPHSSWEKW 270 (393)
T ss_pred HHHHHHH---HHCC--CEEEEEEHHHHCCC----CCCCCCCCCCCCCCHHHHHHHHHHHCC--CCEEEECCCCCCHHHCC
T ss_conf 9999999---8669--90799756840255----356673138998997899999987447--78898178889978815
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHCC
Q ss_conf 34333222222210136788867651698999999988151799809999724668726789986989788537785202
Q gi|254780301|r 322 LPFAEASFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSI 401 (431)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~ 401 (431)
T Consensus 271 ~~f~~ap~Gi~GlEt~lplll~~V~~g~lsl~~lv~l~s~nPAki~GL~kG~i~~G~dADlvi~D~~~-~~~~~--~~Sk 347 (393)
T PRK00369 271 MPFEICPPGIAALSFTPPFIYTLVFKGLLSIERAVSLTSTNPSRILGIPYGEIREGYRANFTVIQLER-WRYST--KYSK 347 (393)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC-CEECC--CHHC
T ss_conf 65435468704078899999999983889999999999887999959888860799976089993875-56534--2105
Q ss_pred CCCCCCCCEEEEEEEEEEEECCEEEEEE
Q ss_conf 4886567727822889999999999862
Q gi|254780301|r 402 HKNTVFDKEFFTGKVVRTYISGKQVYTL 429 (431)
Q Consensus 402 ~~~tp~~g~~~~g~V~~tiv~G~iVy~~ 429 (431)
T Consensus 348 ~~~tPfeG~~l~G~v~~TivrG~vV~~d 375 (393)
T PRK00369 348 VIETPLDGFSLDAAVYATIVEGKIAYLE 375 (393)
T ss_pred CCCCCCCCCEEEEEEEEEEECCEEEEEC
T ss_conf 8988867968877899999999999999