HHsearch alignment for GI: 254780301 and conserved domain: PRK01211

>PRK01211 dihydroorotase; Provisional.
Probab=100.00  E-value=5.6e-43  Score=295.00  Aligned_cols=390  Identities=20%  Similarity=0.206  Sum_probs=199.7

Q ss_pred             CCEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             42999988885000108997999998317865566678877998879889517271411478999831143788999987
Q gi|254780301|r    8 NTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITTLSKEAV   87 (431)
Q Consensus         8 n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~~~~   87 (431)
T Consensus         6 ~g~~~~--~g~~~~~DI~I~dGkI~~I~~~~------~~~~~id~~g~-VlPG~ID~HvH~rePG~~~kEd~~tgs~AAa   76 (413)
T PRK01211          6 CGNFYY--KGKFDYLEVDVNDGIITSIKKDA------GNVKKIKLNGA-VLPAATDIHVHFRTPGETYKEDFSTGSLSAI   76 (413)
T ss_pred             EEEEEE--CCEEEEEEEEEECCEEEEECCCC------CCCCEEEECCE-EECCEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             158999--99488971999899998835889------99746985886-9398779960269999430320999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             07873212454556643331667777677664310122321000134432222222100000112222343332222110
Q gi|254780301|r   88 AGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQV  167 (431)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (431)
T Consensus        77 ~GGvTtv~~mPnt~ppi~~~~~~~~~~~-~~~~~~~~d~~~~~~~~-~~~-~~~~~~~~~g~k~f~~--~~~~~~~~~~i  151 (413)
T PRK01211         77 FGGTTTVMDMPNNKIPIDDYNAFSDKLG-IISRTSYCDFGLYSMET-GDN-SLIIDKRSIGLKVYLG--GSTNTNGTDVI  151 (413)
T ss_pred             CCCCEEEEECCCCCCCCCCHHHHHHHHH-HHHCCCEEEEEEEEEEC-CCC-HHHHHHHHCCEEEEEC--CCCCCCCCHHH
T ss_conf             2991899988999999677999999999-74047546788787123-742-5544313103144105--65555640454


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf             12456765421012222333222222211246753100122221000012355556654320001112223331121100
Q gi|254780301|r  168 LLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYHASVISIPQSIAL  247 (431)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (431)
T Consensus       152 ~~~~~~~~~~~~~~v~~HaEd~~~~~~~~~~~~~~~~~~--~~rp~~~e~~av~~~~~~~~~~~---~~~h~ss~e~~~-  225 (413)
T PRK01211        152 TNEEISKINELNVPVFFHGEDEECLKKHQFEAKNLREHN--LSRPIECEILAAEYVKNLDLKTK---IMAHVSSPDVIG-  225 (413)
T ss_pred             HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCHHHCC--CCCCHHHHHHHHHHHHHHHHHCC---EEEEEECHHHHH-
T ss_conf             599999998679928985358788764330456865631--55759999999999998764338---799994688987-


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             11110012223222222222223222211100000011122222222222223344311113444545432222343332
Q gi|254780301|r  248 IKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEA  327 (431)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (431)
T Consensus       226 --~i~~-------Et~pHhL~l~--de~~~g~~~k~nPPLRs~~d~~aL~~al~dG~ID~IaSDHaPh~~~eK~-~f~~a  293 (413)
T PRK01211        226 --EFLR-------EVTPHHLLLN--DEMPLGSYGKVNPPLRDRSTQSRLLNSYISGNFDILSSDHAPHTENDKT-EFEYA  293 (413)
T ss_pred             --HHHH-------EECCEEEECC--CCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCC-CHHHC
T ss_conf             --7874-------2045048715--5201687616689998979999999987439988896378898946618-86458


Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHCCCCCCCC
Q ss_conf             22222210136788867651698999999988151799809999724668726789986989788537785202488656
Q gi|254780301|r  328 SFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVF  407 (431)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~  407 (431)
T Consensus       294 ~~G~~GlEt~lpl~l~~v~~g~l~l~~lv~~~s~nPAki~gl~kG~i~~G~dADlvI~D~~~~~~v~~~~~~Sk~~~tPf  373 (413)
T PRK01211        294 KSGIIGVETRIPLMLALVSKKILPLDVLYKTAIENPPSIFGIRKGKIENGYDADFMSFDFTNIKRLNDYRLHSKNPVSPF  373 (413)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEECHHHCCCCCCCCCC
T ss_conf             88987614389999999874897999999999999999959987650799987789984999889886884141799772


Q ss_pred             CCEEEEEEEEEEEECCEEEEEEC
Q ss_conf             77278228899999999998624
Q gi|254780301|r  408 DKEFFTGKVVRTYISGKQVYTLE  430 (431)
Q Consensus       408 ~g~~~~g~V~~tiv~G~iVy~~e  430 (431)
T Consensus       374 eG~~~~-~p~~ti~rG~vv~~~g  395 (413)
T PRK01211        374 NGMDAI-FPSHVVMRGDVVIDNY  395 (413)
T ss_pred             CCEEEE-EEEEEEECCEEEEECC
T ss_conf             892871-2499998999999999