HHsearch alignment for GI: 254780301 and conserved domain: PRK01211
>PRK01211 dihydroorotase; Provisional.
Probab=100.00 E-value=5.6e-43 Score=295.00 Aligned_cols=390 Identities=20% Similarity=0.206 Sum_probs=199.7
Q ss_pred CCEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 42999988885000108997999998317865566678877998879889517271411478999831143788999987
Q gi|254780301|r 8 NTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITTLSKEAV 87 (431)
Q Consensus 8 n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~~~~ 87 (431)
T Consensus 6 ~g~~~~--~g~~~~~DI~I~dGkI~~I~~~~------~~~~~id~~g~-VlPG~ID~HvH~rePG~~~kEd~~tgs~AAa 76 (413)
T PRK01211 6 CGNFYY--KGKFDYLEVDVNDGIITSIKKDA------GNVKKIKLNGA-VLPAATDIHVHFRTPGETYKEDFSTGSLSAI 76 (413)
T ss_pred EEEEEE--CCEEEEEEEEEECCEEEEECCCC------CCCCEEEECCE-EECCEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 158999--99488971999899998835889------99746985886-9398779960269999430320999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 07873212454556643331667777677664310122321000134432222222100000112222343332222110
Q gi|254780301|r 88 AGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQV 167 (431)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (431)
T Consensus 77 ~GGvTtv~~mPnt~ppi~~~~~~~~~~~-~~~~~~~~d~~~~~~~~-~~~-~~~~~~~~~g~k~f~~--~~~~~~~~~~i 151 (413)
T PRK01211 77 FGGTTTVMDMPNNKIPIDDYNAFSDKLG-IISRTSYCDFGLYSMET-GDN-SLIIDKRSIGLKVYLG--GSTNTNGTDVI 151 (413)
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHH-HHHCCCEEEEEEEEEEC-CCC-HHHHHHHHCCEEEEEC--CCCCCCCCHHH
T ss_conf 2991899988999999677999999999-74047546788787123-742-5544313103144105--65555640454
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 12456765421012222333222222211246753100122221000012355556654320001112223331121100
Q gi|254780301|r 168 LLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYHASVISIPQSIAL 247 (431)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (431)
T Consensus 152 ~~~~~~~~~~~~~~v~~HaEd~~~~~~~~~~~~~~~~~~--~~rp~~~e~~av~~~~~~~~~~~---~~~h~ss~e~~~- 225 (413)
T PRK01211 152 TNEEISKINELNVPVFFHGEDEECLKKHQFEAKNLREHN--LSRPIECEILAAEYVKNLDLKTK---IMAHVSSPDVIG- 225 (413)
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCHHHCC--CCCCHHHHHHHHHHHHHHHHHCC---EEEEEECHHHHH-
T ss_conf 599999998679928985358788764330456865631--55759999999999998764338---799994688987-
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11110012223222222222223222211100000011122222222222223344311113444545432222343332
Q gi|254780301|r 248 IKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEA 327 (431)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (431)
T Consensus 226 --~i~~-------Et~pHhL~l~--de~~~g~~~k~nPPLRs~~d~~aL~~al~dG~ID~IaSDHaPh~~~eK~-~f~~a 293 (413)
T PRK01211 226 --EFLR-------EVTPHHLLLN--DEMPLGSYGKVNPPLRDRSTQSRLLNSYISGNFDILSSDHAPHTENDKT-EFEYA 293 (413)
T ss_pred --HHHH-------EECCEEEECC--CCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCC-CHHHC
T ss_conf --7874-------2045048715--5201687616689998979999999987439988896378898946618-86458
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHCCCCCCCC
Q ss_conf 22222210136788867651698999999988151799809999724668726789986989788537785202488656
Q gi|254780301|r 328 SFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVF 407 (431)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~ 407 (431)
T Consensus 294 ~~G~~GlEt~lpl~l~~v~~g~l~l~~lv~~~s~nPAki~gl~kG~i~~G~dADlvI~D~~~~~~v~~~~~~Sk~~~tPf 373 (413)
T PRK01211 294 KSGIIGVETRIPLMLALVSKKILPLDVLYKTAIENPPSIFGIRKGKIENGYDADFMSFDFTNIKRLNDYRLHSKNPVSPF 373 (413)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEECHHHCCCCCCCCCC
T ss_conf 88987614389999999874897999999999999999959987650799987789984999889886884141799772
Q ss_pred CCEEEEEEEEEEEECCEEEEEEC
Q ss_conf 77278228899999999998624
Q gi|254780301|r 408 DKEFFTGKVVRTYISGKQVYTLE 430 (431)
Q Consensus 408 ~g~~~~g~V~~tiv~G~iVy~~e 430 (431)
T Consensus 374 eG~~~~-~p~~ti~rG~vv~~~g 395 (413)
T PRK01211 374 NGMDAI-FPSHVVMRGDVVIDNY 395 (413)
T ss_pred CCEEEE-EEEEEEECCEEEEECC
T ss_conf 892871-2499998999999999