HHsearch alignment for GI: 254780301 and conserved domain: PRK09236
>PRK09236 dihydroorotase; Reviewed.
Probab=100.00 E-value=0 Score=354.52 Aligned_cols=423 Identities=22% Similarity=0.285 Sum_probs=201.9
Q ss_pred CCCEEEECCEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHH
Q ss_conf 96269964299998888500010899799999831786556667887799887988951727141147899983114378
Q gi|254780301|r 1 MTSFVLNNTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNIT 80 (431)
Q Consensus 1 M~~llI~n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~ 80 (431)
T Consensus 1 M~dllIkn~~vv~~~~~--~~adI~I~dGkI~~I~~~i~---~~~a~~vIDA~G~~v~PG~ID~H~H~~epg~~~ke~~~ 75 (444)
T PRK09236 1 MKSLLIKNARIVNEGRI--FDGDVLIEGGRIAKIAGSIP---AKSADEVIDAAGRYLLPGMIDDQVHFREPGLTHKGDIA 75 (444)
T ss_pred CCCEEEECEEEECCCCC--EEEEEEEECCEEEEECCCCC---CCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHH
T ss_conf 97579969599999986--78239998999998057789---99988799899999936889722254899975435266
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999870787321245455664333166777767766431012232100013443222222210000011222234333
Q gi|254780301|r 81 TLSKEAVAGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPM 160 (431)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
T Consensus 76 s~s~aA~~GGvTtv~~mp~t~p~~~~~~~l~~~~-~~a~~~~~~~~~~~-~g~~~~~~~~i~~l~~~~~~g~k~f~g~s~ 153 (444)
T PRK09236 76 SESRAAVAGGITSFMDMPNTNPPTTTLEALEAKY-DIAAGRSWANYSFY-FGATNDNLDEIKALDPKRVCGVKVFMGAST 153 (444)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH-HHHCCCCEEEEEEE-ECCCCCCHHHHHHHHHCCCCEEEEEECCCC
T ss_conf 7789998489139973588899867899999999-98534870459976-065588699998655534866999932678
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCC
Q ss_conf 22221101245676542101222233322222221----1246753100122221000-012355556654320001112
Q gi|254780301|r 161 SIHDTQVLLNSMKYAHMLNAIVALDTHDHFLGSRG----VINEGIIANYLGLVGIPSI-SETVPLARDLLIAQHTGGHYH 235 (431)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (431)
T Consensus 154 g~~~~~~~~~l~~~~~~~~~~~~~H~e~~~~i~~~~~~~~~~~g~~~~~~~h~~~r~~~a~~~~~~~ai~la~~~g~~lh 233 (444)
T PRK09236 154 GNMLVDNPETLERIFRDSPTLIATHCEDTPTIKANEAKYREKYGEDLPAELHPLIRSREACYKSSSLAVSLAKKHGTRLH 233 (444)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 87404649999999975898699946885899988999998728888832255547677899999999999986099789
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22333112110011110012223222222222223222211100000011122222222222223344311113444545
Q gi|254780301|r 236 ASVISIPQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPR 315 (431)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (431)
T Consensus 234 i~Hist~~~l~li~~a~~~g~~it~e~~~h~L~~~~~~~~~~~~~~k~~Pplr~~~d~~aL~~al~~g~id~I~sDHaP~ 313 (444)
T PRK09236 234 VLHLSTAKELSLFENGPLEEKRITAEVCVHHLWFDDSDYARLGNLIKCNPAIKTASDREALRQALANGRIDVIATDHAPH 313 (444)
T ss_pred EEECCCHHHHHHHHHHHHHCCCCCCEECCCEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 99568589999999989818987403011110468778864497101368758567799999997479679997688776
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC-CCEECCCCCCCEEEECCCCCEEEC
Q ss_conf 4322223433322222221013678886765169899999998815179980999-972466872678998698978853
Q gi|254780301|r 316 HMDTKLLPFAEASFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLP-GGTLQTGTAADIALIDLNYQWTVK 394 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~-~G~I~~Gk~ADlvi~D~~~~~~i~ 394 (431)
T Consensus 314 ~~~~K~~~~~~a~~G~~gle~~lp~~l~~v~~g~lsl~~~v~~~s~nPA~i~GL~~kG~I~~G~dADlvl~Dp~~~~~v~ 393 (444)
T PRK09236 314 TWEEKQGPYFQAPSGLPLVQHALVALLELVHEGKLSLEQVVEKTAHAPAELFAIEDRGFIREGYWADLVLVDPNSPWTVT 393 (444)
T ss_pred CHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEC
T ss_conf 77672488401999841699999999999980874699999998576999849898886689984538999199978988
Q ss_pred HHHHHCCCCCCCCCCEEEEEEEEEEEECCEEEEEEC
Q ss_conf 778520248865677278228899999999998624
Q gi|254780301|r 395 ADDMSSIHKNTVFDKEFFTGKVVRTYISGKQVYTLE 430 (431)
Q Consensus 395 ~~~~~s~~~~tp~~g~~~~g~V~~tiv~G~iVy~~e 430 (431)
T Consensus 394 ~~~~~s~~~~sp~~G~~~~G~v~~t~~~G~~v~~~g 429 (444)
T PRK09236 394 RENILSKCGWSPFEGTTFRSRVATTFVNGQLVWHGG 429 (444)
T ss_pred HHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECC
T ss_conf 243736688788479788779999999999999999