HHsearch alignment for GI: 254780301 and conserved domain: cd00854
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=100.00 E-value=1.2e-33 Score=234.98 Aligned_cols=88 Identities=31% Similarity=0.510 Sum_probs=69.5
Q ss_pred EEEECCEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCC---CCCCHH
Q ss_conf 69964299998888500010899799999831786556667887799887988951727141147899983---114378
Q gi|254780301|r 4 FVLNNTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDE---YSKNIT 80 (431)
Q Consensus 4 llI~n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~---~~~~~~ 80 (431)
T Consensus 1 llIkng~Vv~~~~--i~~~dV~I~dGkI~aIg~~~---~~~~~~~vIDa~G~~v~PGlID~H~H~~~g~~~~~~~~~~~~ 75 (374)
T cd00854 1 LIIKNARILTPGG--LEDGAVLVEDGKIVAIGPED---ELEEADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALK 75 (374)
T ss_pred CEEECEEEECCCC--EEEEEEEEECCEEEEEECCC---CCCCCCEEEECCCCEEECCCCEECCCCCCCCCCCCCCHHHHH
T ss_conf 9897949987990--78638999899999972888---899999799899999988900100179988887778999999
Q ss_pred HHHHHHHCCCCCCCCC
Q ss_conf 8999987078732124
Q gi|254780301|r 81 TLSKEAVAGGITSIIL 96 (431)
Q Consensus 81 ~~~~~~~~~~~~~~~~ 96 (431)
T Consensus 76 ~~~~~~~~~GvTt~~~ 91 (374)
T cd00854 76 TIAEALAKHGTTSFLP 91 (374)
T ss_pred HHHHHHHHCCCEEEEE
T ss_conf 9999999649459961