HHsearch alignment for GI: 254780301 and conserved domain: cd01306
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.54 E-value=2e-14 Score=111.00 Aligned_cols=77 Identities=25% Similarity=0.280 Sum_probs=61.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC-CCEECCCCCCCEEEECCCCCEEECHHHHHCCCC
Q ss_conf 3322222221013678886765169899999998815179980999-972466872678998698978853778520248
Q gi|254780301|r 325 AEASFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLP-GGTLQTGTAADIALIDLNYQWTVKADDMSSIHK 403 (431)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~-~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~ 403 (431)
T Consensus 248 ~diL~SDY~p~SLL~Aaf~L~~~~~~~L~~A~~lVS~nPA~a~gL~DRG~I~~G~RADLv~v~~~~~------------- 314 (325)
T cd01306 248 LDILSSDYVPASLLHAAFRLADLGGWSLPEAVALVSANPARAVGLTDRGSIAPGKRADLILVDDMDG------------- 314 (325)
T ss_pred CCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC-------------
T ss_conf 7687107886789999999987379999999999856599886996566647886268899963899-------------
Q ss_pred CCCCCCEEEEEEEEEEEECC
Q ss_conf 86567727822889999999
Q gi|254780301|r 404 NTVFDKEFFTGKVVRTYISG 423 (431)
Q Consensus 404 ~tp~~g~~~~g~V~~tiv~G 423 (431)
T Consensus 315 -~P--------~v~~vw~~G 325 (325)
T cd01306 315 -VP--------VVRTVWRGG 325 (325)
T ss_pred -CC--------EEEEEECCC
T ss_conf -75--------588876385