HHsearch alignment for GI: 254780301 and conserved domain: cd01309
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.97 E-value=8e-31 Score=216.69 Aligned_cols=70 Identities=24% Similarity=0.454 Sum_probs=58.2
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC--CEECCCCCCCEEEECCCCCEEECHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 6788867651698999999988151799809999--72466872678998698978853778520248865677278228
Q gi|254780301|r 338 LSAALRLFHGQQISLKKLIRALSTRPAQIFNLPG--GTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVFDKEFFTGK 415 (431)
Q Consensus 338 ~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~~--G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~~g~~~~g~ 415 (431)
T Consensus 288 ~~~~~~~~~~~Gl~~~eal~~aT~n~A~~lgl~~~~Gsie~Gk~ADlVvvd~d-----------------PL~~~---~~ 347 (359)
T cd01309 288 LNLEAAKAVKYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDADLVVWNGD-----------------PLEPT---SK 347 (359)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEECCC-----------------CCCCH---HH
T ss_conf 99999999980999999999999999999499898500078883768998999-----------------66650---12
Q ss_pred EEEEEECCEEEE
Q ss_conf 899999999998
Q gi|254780301|r 416 VVRTYISGKQVY 427 (431)
Q Consensus 416 V~~tiv~G~iVy 427 (431)
T Consensus 348 v~~v~~~Gr~v~ 359 (359)
T cd01309 348 PEQVYIDGRLVY 359 (359)
T ss_pred HHEEEECCEEEC
T ss_conf 261467999949