HHsearch alignment for GI: 254780301 and conserved domain: cd01313
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.92 E-value=2.3e-25 Score=181.45 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=54.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEE--CHHHHHCCCCCCCCCCEEEEEEEEEEEECCE
Q ss_conf 16989999999881517998099997246687267899869897885--3778520248865677278228899999999
Q gi|254780301|r 347 GQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTV--KADDMSSIHKNTVFDKEFFTGKVVRTYISGK 424 (431)
Q Consensus 347 ~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i--~~~~~~s~~~~tp~~g~~~~g~V~~tiv~G~ 424 (431)
T Consensus 344 ~~~~~~~~vl~mAT~~GA~aLgl~iGsLe~Gk~ADlvvvD~~~p~~~~~~~~~~~~~lV~~---a~--~~~V~~V~V~Gr 418 (418)
T cd01313 344 AGGSSARALLDAALAGGAQALGLATGALEAGARADLLSLDLDHPSLAGALPDTLLDAWVFA---AG--DREVRDVVVGGR 418 (418)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCC---CC--CCCCCEEEECCC
T ss_conf 7788899999999999999968988877876830789988999765799975699997277---99--987467984898