RPSBLAST alignment for GI: 254780301 and conserved domain: cd01316
>gnl|CDD|30059 cd01316, CAD_DHOase, The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.. Length = 344
Score = 107 bits (268), Expect = 7e-24
Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 44/374 (11%)
Query: 55 LVAVPGIIDARVTLTGSPDEYSKNITTLSKEAVAGGITSIILMPLGMSSFLDEYTFIKYA 114
+ +PG+ID V L + ++ + +K A+AGG T + MP S +D +
Sbjct: 2 TIRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASL--KL 59
Query: 115 LEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQVLLNSMKY 174
++ + Y + ++ + E + + + LN
Sbjct: 60 VQSLAQAKARCDYAFSIGATSTNAATVGE-----------LASEAVGL---KFYLNETFS 105
Query: 175 AHMLNAIVALDTH-DHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGH 233
+L+ I A +H + + ++ ++ +++ LA LL+A
Sbjct: 106 TLILDKITAWASHFNAWPSTKPIVTH---------------AKSQTLAAVLLLASLHNRS 150
Query: 234 YHASVISIPQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETER 293
H +S + I LI+ AKA K TC +S ++L L+++D+ +V P L + ++
Sbjct: 151 IHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLP--RGQYEVRPFLPTREDQ 208
Query: 294 MSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEASFGSIGLETMLSAALRLFHGQQISLK 353
++ E L+ ID +DH P + K + G G+ET L L H +++++
Sbjct: 209 EALWENLDY--IDCFATDHAPHTLAEKT--GNKPPPGFPGVETSLPLLLTAVHEGRLTIE 264
Query: 354 KLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVFDKEFFT 413
++ L T P +IFNLP Q+ T + +DL+ +WT+ + + S T F+ +
Sbjct: 265 DIVDRLHTNPKRIFNLPP---QSDTYVE---VDLDEEWTIPKNPLQSKKGWTPFEGKKVK 318
Query: 414 GKVVRTYISGKQVY 427
GKV R + G+ +
Sbjct: 319 GKVQRVVLRGETAF 332