RPSBLAST alignment for GI: 254780301 and conserved domain: cd01316

>gnl|CDD|30059 cd01316, CAD_DHOase, The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.. Length = 344
 Score =  107 bits (268), Expect = 7e-24
 Identities = 84/374 (22%), Positives = 161/374 (43%), Gaps = 44/374 (11%)

Query: 55  LVAVPGIIDARVTLTGSPDEYSKNITTLSKEAVAGGITSIILMPLGMSSFLDEYTFIKYA 114
            + +PG+ID  V L      + ++  + +K A+AGG T +  MP    S +D  +     
Sbjct: 2   TIRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASL--KL 59

Query: 115 LEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQVLLNSMKY 174
           ++ +        Y  +   ++     + E                + +   +  LN    
Sbjct: 60  VQSLAQAKARCDYAFSIGATSTNAATVGE-----------LASEAVGL---KFYLNETFS 105

Query: 175 AHMLNAIVALDTH-DHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGH 233
             +L+ I A  +H + +  ++ ++                 +++  LA  LL+A      
Sbjct: 106 TLILDKITAWASHFNAWPSTKPIVTH---------------AKSQTLAAVLLLASLHNRS 150

Query: 234 YHASVISIPQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETER 293
            H   +S  + I LI+ AKA   K TC +S ++L L+++D+       +V P L +  ++
Sbjct: 151 IHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLP--RGQYEVRPFLPTREDQ 208

Query: 294 MSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEASFGSIGLETMLSAALRLFHGQQISLK 353
            ++ E L+   ID   +DH P  +  K     +   G  G+ET L   L   H  +++++
Sbjct: 209 EALWENLDY--IDCFATDHAPHTLAEKT--GNKPPPGFPGVETSLPLLLTAVHEGRLTIE 264

Query: 354 KLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVFDKEFFT 413
            ++  L T P +IFNLP    Q+ T  +   +DL+ +WT+  + + S    T F+ +   
Sbjct: 265 DIVDRLHTNPKRIFNLPP---QSDTYVE---VDLDEEWTIPKNPLQSKKGWTPFEGKKVK 318

Query: 414 GKVVRTYISGKQVY 427
           GKV R  + G+  +
Sbjct: 319 GKVQRVVLRGETAF 332