RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780302|ref|YP_003064715.1| putative glycerol-3-phosphate acyltransferase PlsY [Candidatus Liberibacter asiaticus str. psy62] (205 letters) >gnl|CDD|145683 pfam02660, DUF205, Domain of unknown function (DUF205). This family consists of hypothetical transmembrane proteins none of which have any known function, the aligned region is around 200 amino acids long. Length = 178 Score = 165 bits (420), Expect = 8e-42 Identities = 75/178 (42%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Query: 19 ILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATAT 78 +L+Y +GSIPFG L+ ++FG DIR +GSGN GATNVLR KK L LD +K Sbjct: 1 LLAYLLGSIPFGYLIGKLFGGIDIRKVGSGNPGATNVLRVLGKKAGILVLLLDILKGFLA 60 Query: 79 IIIVSELFDHKIG-ILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILFSAI 137 +++ L + LAG A LGH FPV+LKFKGGKG++T +GVL+AL +A++ A+ Sbjct: 61 VLLARLLGLDPLLLALAGLAAVLGHNFPVFLKFKGGKGVATTLGVLLALSPLVALIALAV 120 Query: 138 WMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRLI 195 W+ L+T Y S++SL + L++ +++W+ + + + + V ++H ENIKRL+ Sbjct: 121 WLLVLLITRYVSLASLVAALLLPILLWLFGGPLEYLLFALLLALLVIYRHRENIKRLL 178 >gnl|CDD|30692 COG0344, COG0344, Predicted membrane protein [Function unknown]. Length = 200 Score = 146 bits (369), Expect = 5e-36 Identities = 81/194 (41%), Positives = 123/194 (63%), Gaps = 6/194 (3%) Query: 15 IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74 I+ L+++Y +GSIPFGL+++++FG D+R IGSGN GATNVLR KK A A L LD +K Sbjct: 6 ILLLLIAYLLGSIPFGLIISKIFGGIDVRKIGSGNPGATNVLRVLGKKAAAAVLLLDILK 65 Query: 75 ATATIIIVSELFDHK---IGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMA 131 T +++ + L G A LGHIFP++ FKGGKG++T +GVL+AL +A Sbjct: 66 GTLAVLLARFGLLGVLPLVLALVGIAAILGHIFPIFFGFKGGKGVATTLGVLLALAPWLA 125 Query: 132 ILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPII---FTFMTITVYWKHI 188 ++ +A W+ AL+T YSS++SL + ++ A + + P I + I V ++H Sbjct: 126 LIGAATWLLIALLTKYSSLASLVAAILAAPFLANFDLYLIAPQIGFPVALLAILVIYRHR 185 Query: 189 ENIKRLILGSEKKI 202 +NI+RL+ G+E KI Sbjct: 186 DNIQRLLNGTESKI 199 >gnl|CDD|35424 KOG0203, KOG0203, KOG0203, Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]. Length = 1019 Score = 30.2 bits (68), Expect = 0.36 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 18/130 (13%) Query: 54 NVLRTSNKKLAFATLSLDAIKATATIIIVSELFDHKIGILAGFATFLGHIFPVWLKFKGG 113 N L T N +AF S + ++ T I+++ G T +G I + + G Sbjct: 231 NPLETRN--IAFF--STNCVEGTGRGIVIA----------TGDRTVMGRIASLASGLEDG 276 Query: 114 KG-ISTYIGVLIALELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNI 172 K I+ I I + +AI + AL+ GY + ++ + II PE + Sbjct: 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLI---GIIVANVPEGLL 333 Query: 173 PIIFTFMTIT 182 + +T+T Sbjct: 334 ATVTVCLTLT 343 >gnl|CDD|33879 COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]. Length = 219 Score = 26.4 bits (58), Expect = 5.4 Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 114 KGISTYIGVLIALELKMAILFSAIWMSSAL 143 + ++ G LE+ AI +SA+WM+ AL Sbjct: 52 RLLARLSGPKRILEIGTAIGYSALWMALAL 81 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.328 0.142 0.417 Gapped Lambda K H 0.267 0.0806 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 2,464,969 Number of extensions: 131807 Number of successful extensions: 687 Number of sequences better than 10.0: 1 Number of HSP's gapped: 676 Number of HSP's successfully gapped: 120 Length of query: 205 Length of database: 6,263,737 Length adjustment: 89 Effective length of query: 116 Effective length of database: 4,340,536 Effective search space: 503502176 Effective search space used: 503502176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 55 (24.8 bits)