RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780302|ref|YP_003064715.1| putative glycerol-3-phosphate
acyltransferase PlsY [Candidatus Liberibacter asiaticus str. psy62]
         (205 letters)



>gnl|CDD|178934 PRK00220, PRK00220, putative glycerol-3-phosphate acyltransferase
           PlsY; Provisional.
          Length = 198

 Score =  189 bits (482), Expect = 5e-49
 Identities = 80/192 (41%), Positives = 121/192 (63%), Gaps = 1/192 (0%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           ++ ++L+Y +GSIPF LL+ ++FG  D R  GSGN GATNVLR   KK A ATL  DA+K
Sbjct: 6   LLLILLAYLLGSIPFALLVGKLFGLPDPREHGSGNPGATNVLRIGGKKAAIATLLGDALK 65

Query: 75  ATATIIIVSEL-FDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAIL 133
            T  +++      D     L   A  LGHIFPV+ KFKGGKG++T  GVL+ +   +A++
Sbjct: 66  GTLAVLLAYLFGLDPISLGLIALAAVLGHIFPVFFKFKGGKGVATAAGVLLGIGPLLALI 125

Query: 134 FSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKR 193
            +A W+  AL+T YSS+++L + LI  + +W   P+    I    +++ + ++H +NI+R
Sbjct: 126 LAATWLLVALLTRYSSLAALVAALIAPIYVWWFPPDWQFTIPVALLSVLIIYRHRDNIQR 185

Query: 194 LILGSEKKIFKK 205
           L+ G+E KI  K
Sbjct: 186 LLAGTESKIGWK 197


>gnl|CDD|184657 PRK14396, PRK14396, membrane protein; Provisional.
          Length = 190

 Score =  141 bits (357), Expect = 1e-34
 Identities = 85/187 (45%), Positives = 118/187 (63%), Gaps = 3/187 (1%)

Query: 18  LILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATA 77
           L  SY IGSIPF  +L ++F  +D+RS+GSGNIGATNV R  NK ++F  L LD  K+  
Sbjct: 6   LFASYLIGSIPFSWILVKVFYKRDLRSVGSGNIGATNVFRV-NKGISFLVLLLDIFKSAL 64

Query: 78  TIIIVSELFDHK-IGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILFSA 136
            I+I+ ++  HK I  L GF   LGHIFPVW  FKGGKGI+  IGV++++ +K+  LF  
Sbjct: 65  VILILEKMCAHKSILYLTGFTVVLGHIFPVWFLFKGGKGIAPTIGVVLSINIKIFFLFII 124

Query: 137 IWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRLIL 196
            W    ++  YSS+SS+ S +I + I        N  I +  M+I +  KH +NI R+I 
Sbjct: 125 TWAVVFMIFRYSSLSSIIS-IISSCIYCAVTENFNSSIFYIAMSIIILIKHRDNIIRMIN 183

Query: 197 GSEKKIF 203
           G+EKK+F
Sbjct: 184 GTEKKLF 190


>gnl|CDD|172870 PRK14394, PRK14394, membrane protein; Provisional.
          Length = 195

 Score =  141 bits (356), Expect = 1e-34
 Identities = 85/186 (45%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 18  LILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATA 77
            IL Y IGSIPFG +L+ + G  DIR  GSGNIGATNV R  NKKLA  TL LDA+K+  
Sbjct: 8   FILCYLIGSIPFGFILSYVGGIGDIRKTGSGNIGATNVFR-KNKKLALLTLLLDALKSFI 66

Query: 78  TIIIVSEL-FDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILFSA 136
            + I  +   D+ I  LA     +GH+FPV+L FKGGKG++  +G LI ++ K+AI F  
Sbjct: 67  CVAIAQKYNIDNTILFLAALFAIIGHMFPVYLFFKGGKGVAPLLGSLIFIDYKVAICFLT 126

Query: 137 IWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRLIL 196
            W+   L+  Y+S+SS+ STLI  + I  TY  +   +IFT   + +  +H +NI R++ 
Sbjct: 127 FWIICFLLCKYASLSSIVSTLIALLFIC-TYYTIVQSVIFTITALLIITQHTDNIIRMLN 185

Query: 197 GSEKKI 202
            SE KI
Sbjct: 186 KSENKI 191


>gnl|CDD|161669 TIGR00023, TIGR00023, acyl-phosphate glycerol 3-phosphate
           acyltransferase.  This model represents the full length
           of acylphosphate:glycerol 3-phosphate acyltransferase,
           and integral membrane protein about 200 amino acids in
           length, called PlsY in Streptococcus pneumoniae, YneS in
           Bacillus subtilis, and YgiH in E. coli. It is found in a
           single copy in a large number of bacteria, including the
           Mycoplasmas but not Mycobacteria or spirochetes, for
           example. Its partner is PlsX (see TIGR00182), and the
           pair can replace PlsB for synthesizing
           1-acylglycerol-3-phosphate.
          Length = 196

 Score =  140 bits (356), Expect = 2e-34
 Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 2/192 (1%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           +  L++ Y IGSIPF  L+ ++    DIR  GSGN GATNVLRT   K A   L  D +K
Sbjct: 6   VFLLLIGYLIGSIPFAYLVGKILKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILK 65

Query: 75  ATATIIIVSELF-DHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAIL 133
               + +   L     +  L   A  LGHIFP++ KFKGGKG++T  G L+ +   + ++
Sbjct: 66  GMLAVALSFLLGLFDFLPGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLI 125

Query: 134 FSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKR 193
             A W+   LVT Y S+SS+ + +++   +   +    + I  T + I V ++H  NI+R
Sbjct: 126 MLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLP-YLYIPVTLLLIFVIYRHRANIQR 184

Query: 194 LILGSEKKIFKK 205
           L+ G+E K+++K
Sbjct: 185 LLNGTEPKVWQK 196


>gnl|CDD|172876 PRK14400, PRK14400, membrane protein; Provisional.
          Length = 201

 Score =  132 bits (334), Expect = 6e-32
 Identities = 70/192 (36%), Positives = 106/192 (55%), Gaps = 8/192 (4%)

Query: 18  LILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATA 77
           +   Y  GSIPFG++L R+    D+R++GSGNIGATNV R   KKL    L LDA KA  
Sbjct: 11  VAAGYLAGSIPFGVVLGRLVLGVDVRTVGSGNIGATNVARAGGKKLGVLVLLLDAAKAIV 70

Query: 78  TIIIVSELFD-----HKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAI 132
            I++   L           +    A F+GH++PVWL FKGGKG++T +G+ + L    A+
Sbjct: 71  PILVARRLLAGTPHAELWVVAVALAAFVGHLYPVWLGFKGGKGVATGLGIFLVLAPWAAL 130

Query: 133 LFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTIT--VYWKHIEN 190
             +  +  +  +T  SS+ SL  T +     + TY     P+ +  + I   ++ +H EN
Sbjct: 131 AGAVGYAVAYGLTRISSVGSLTGTALCVAGGFATYG-PRHPVSWAGLAIALLIFVRHREN 189

Query: 191 IKRLILGSEKKI 202
           I+RL+ G EK++
Sbjct: 190 IRRLVRGEEKRV 201


>gnl|CDD|184670 PRK14419, PRK14419, membrane protein; Provisional.
          Length = 199

 Score =  130 bits (330), Expect = 2e-31
 Identities = 64/192 (33%), Positives = 108/192 (56%), Gaps = 1/192 (0%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           ++ ++L+Y +GS P G L  R     D+R IGSG+ GATNVLR   K  A     +D  K
Sbjct: 5   LLIILLAYLLGSFPSGYLAGRWLKGIDLREIGSGSTGATNVLRNVGKGPALFVFIIDVGK 64

Query: 75  ATATIIIVSELF-DHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAIL 133
               +++   L     + +LAG A  LGHI+PVWL FKGGK ++T +G+L+AL   + + 
Sbjct: 65  GVLAVLLAYALGLQPWLQVLAGLAALLGHIWPVWLGFKGGKAVATGLGMLLALSWPVGLA 124

Query: 134 FSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKR 193
              I++    ++   S+SS+ + + + +++++    +   +      + V W+H  NI+R
Sbjct: 125 SLGIFLIVLALSRIVSLSSISAAIALPLLMFLLNIPLPYILFSLAAGLLVIWRHRSNIER 184

Query: 194 LILGSEKKIFKK 205
           L+ G+E KI +K
Sbjct: 185 LLAGTEPKIGQK 196


>gnl|CDD|172869 PRK14393, PRK14393, membrane protein; Provisional.
          Length = 194

 Score =  128 bits (323), Expect = 1e-30
 Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 5/196 (2%)

Query: 11  LIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSL 70
           +   I+ L+ +Y +GSIP GLLL +  G  DIR+ GSGNIGATNV RT  +K+   TL  
Sbjct: 1   MTNEILLLVGAYLLGSIPTGLLLAKAVGV-DIRNTGSGNIGATNVYRTLGRKVGILTLIG 59

Query: 71  DAIKATATIIIVSELFDHKIGI-LAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELK 129
           D +K    ++I  +L    + I   G A FLGH++ V+L FKGGKG++T +GV + L   
Sbjct: 60  DCLKGLVPVLIARKLGLPDLWIAAVGLAAFLGHVYTVFLGFKGGKGVATALGVFLGLS-P 118

Query: 130 MAILFS-AIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHI 188
           +++L + AI++       Y S+ S+ +   + +++  T     +  +   + + V +KH 
Sbjct: 119 LSVLGALAIFVLLVAKWRYVSLGSITAAAAMPLLVAFTEGSPLLVAMTVVIALIVIFKHR 178

Query: 189 ENIKRLILGSEKKIFK 204
           ENI+RL  G+E + FK
Sbjct: 179 ENIQRLRAGTENR-FK 193


>gnl|CDD|172874 PRK14398, PRK14398, membrane protein; Provisional.
          Length = 191

 Score =  125 bits (315), Expect = 9e-30
 Identities = 76/189 (40%), Positives = 115/189 (60%), Gaps = 5/189 (2%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
            I LILSY +GSIPF L++T++ G  ++R +GSGNIGATNV RT NK LA   L LD++K
Sbjct: 4   YIVLILSYILGSIPFSLIITKIKGI-NLREVGSGNIGATNVARTGNKFLAALALFLDSLK 62

Query: 75  ATATIIIVSELFDHKIGIL--AGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAI 132
               + I  +  D+    +  +     LGH+FP+WLKF GGKG++T +G+LIAL + + +
Sbjct: 63  GFIAVYIAQQFCDNNDFYIYVSAILAVLGHMFPIWLKFSGGKGVATTLGILIALNISITL 122

Query: 133 LFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIK 192
            F  +W+       YSS++SL +T   A + W  + + N+ +    + I ++ KH  NI 
Sbjct: 123 AFVFVWLIVFFAFRYSSLASLSAT--SAAVAWSFFFQRNLFLTLLTVAILIFLKHYRNIV 180

Query: 193 RLILGSEKK 201
            L+ G E+K
Sbjct: 181 NLLQGRERK 189


>gnl|CDD|172873 PRK14397, PRK14397, membrane protein; Provisional.
          Length = 222

 Score =  122 bits (308), Expect = 6e-29
 Identities = 70/194 (36%), Positives = 101/194 (52%), Gaps = 6/194 (3%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           ++ +  +Y +GSIPFGL+  R F   D R+ GS N+GATNV R    K    TL  D +K
Sbjct: 4   LLWIATAYVMGSIPFGLVFARTFCGIDPRTGGSRNVGATNVARLCGTKWGVLTLVCDVLK 63

Query: 75  ATATIIIVSELFDHKIGI-LAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAIL 133
               + +   + D  +   L   A  LGH++  +L F+GGK ++T IGV I L     +L
Sbjct: 64  GAVPVAVAMSISDSPVFHSLTALAALLGHLYSCFLGFRGGKAVATTIGVFIPLAFWQLLL 123

Query: 134 FSAIWMSSALVTGYSSISSLFSTLIIAM--IIWITYPEVNIPIIFTFMTITVYWKHIENI 191
              + +     +G+ S+ SL  TL+ A+  ++ IT     IP+    M + VYW H ENI
Sbjct: 124 SGILCLLVIWRSGFVSLGSL--TLVTALPVMLLITGKWKLIPLALVVMAL-VYWSHRENI 180

Query: 192 KRLILGSEKKIFKK 205
            RL  G EK   KK
Sbjct: 181 GRLARGEEKPWQKK 194


>gnl|CDD|172879 PRK14403, PRK14403, membrane protein; Provisional.
          Length = 196

 Score =  111 bits (280), Expect = 1e-25
 Identities = 64/185 (34%), Positives = 110/185 (59%), Gaps = 2/185 (1%)

Query: 19  ILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATAT 78
           IL Y IGSIPF  L+ +     D+R +GSGN+GATN +RT+   +    L LDA+K    
Sbjct: 8   ILGYFIGSIPFSYLIPKWLKGIDVRKVGSGNVGATNAIRTTGPVVGGICLLLDALKGFFP 67

Query: 79  IIIVSELF-DHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILFSAI 137
           + I +    D K+  L   AT LGH FP+++KFKGGKG+++ +G++  L     ++F+  
Sbjct: 68  VFIATTFSGDPKLVSLTAIATVLGHDFPIFMKFKGGKGVASTLGIIFCLSWPTGLVFTLT 127

Query: 138 WMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRLILG 197
           W+   ++T Y+S+ SL +  + A++ ++     +  ++   + +    +H ENI+RL+ G
Sbjct: 128 WLVIVMLTKYASLGSLVALYVSALLGYL-LKGYDTGMLILILAVLSTLRHSENIQRLLNG 186

Query: 198 SEKKI 202
           +E+K+
Sbjct: 187 TERKV 191


>gnl|CDD|184661 PRK14405, PRK14405, membrane protein; Provisional.
          Length = 202

 Score =  109 bits (274), Expect = 6e-25
 Identities = 76/201 (37%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 11  LIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSL 70
           +I  +++++LSY +GS+ F  L+ +     DIR  GSGN GATN LR   K  A   L L
Sbjct: 1   MILLLLAVVLSYLLGSVSFSYLIAKKIKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLL 60

Query: 71  DAIKATATIIIVSELFDHKIGI---LAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALE 127
           D +K  A + I   L          LAG A  +GH +P++  F+GGKGI+T IGV+  L 
Sbjct: 61  DVVKGIAAVWIGRLLTGDGAAWFPALAGLAAIIGHNWPIYFGFRGGKGIATTIGVVATLV 120

Query: 128 LKMAILFSAIWMSSALVTGYSSISSL-FSTLIIAMIIWITYPEVNIPIIFTFMTITV--Y 184
              A++   I + S ++T Y S+ SL F TL   ++    YP   IP I+  + I +  +
Sbjct: 121 FLPALIAGVIAIISIVITRYVSLGSLLFVTLTPVLLYIFDYP---IPYIWLSLIIAIFAF 177

Query: 185 WKHIENIKRLILGSEKKIFKK 205
           W+H  NI RL+ G+E K+ KK
Sbjct: 178 WRHRTNIVRLLSGTENKLGKK 198


>gnl|CDD|184659 PRK14402, PRK14402, membrane protein; Provisional.
          Length = 198

 Score =  108 bits (272), Expect = 9e-25
 Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 2/192 (1%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           +++L+L+Y  GSIP G  + R  G  DIR +GSGN GATNVLR+  K  A      D +K
Sbjct: 6   VLALLLAYLFGSIPAGAWVARTRGV-DIRKVGSGNSGATNVLRSLGKGPALVVAFFDVLK 64

Query: 75  ATATIIIVSEL-FDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAIL 133
               +++   L  D     L   A  LGH +  +L+F+GGKG++T  G L+ L+  +A+L
Sbjct: 65  GGIAVLLARALGLDGMWAGLVAVAAVLGHNYSPFLRFRGGKGVATSFGTLLFLDPVLALL 124

Query: 134 FSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKR 193
              + ++   +T + S  S+   +   ++       +        +   ++W H ENI+R
Sbjct: 125 TFPVGVACMWLTRFVSAGSMIGAVTAGVLALALGRPLWEVATVVLLAALLFWTHRENIRR 184

Query: 194 LILGSEKKIFKK 205
           L  G+E+++ +K
Sbjct: 185 LQAGTERRLGEK 196


>gnl|CDD|172882 PRK14406, PRK14406, membrane protein; Provisional.
          Length = 199

 Score =  107 bits (269), Expect = 2e-24
 Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           I ++I+ Y IG+IPF  ++ ++ G  DIR +GSGN+G TNVLR +          LD +K
Sbjct: 3   IYAIIIGYFIGAIPFSFIIPKLKGI-DIRKVGSGNVGGTNVLRNAGAGYGALAFFLDIMK 61

Query: 75  ATATIIIVSELFDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILF 134
           A   ++IV   F     ++AG     GH + ++LKFKGGKG++T  GV +A+     ++F
Sbjct: 62  AYVAVLIVKN-FGINAMLMAGAMAVFGHCYSIFLKFKGGKGVATTFGVFLAIFPWSGLVF 120

Query: 135 SAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRL 194
             IW++   +T Y S++S+    ++A  I+  +   +  +IF  +T+    +H ENIKRL
Sbjct: 121 FGIWLAIVALTKYVSLASIIG--LLAASIFTFFFGKDYWVIFLALTLFSVLRHKENIKRL 178

Query: 195 ILGSEKK 201
           + G+E+K
Sbjct: 179 LNGNERK 185


>gnl|CDD|184664 PRK14412, PRK14412, membrane protein; Provisional.
          Length = 198

 Score =  106 bits (267), Expect = 3e-24
 Identities = 63/191 (32%), Positives = 105/191 (54%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           ++  I++Y IG I    + T+     DIR+ GSGN GATNVLR    K A    +LD +K
Sbjct: 4   VLVAIIAYLIGCINNAYIFTKYTRKIDIRNYGSGNAGATNVLRVLGYKAAAPVFALDVLK 63

Query: 75  ATATIIIVSELFDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILF 134
               ++I   L      ++AG A   GH +PV+LKF+GGKGI+T +GV++ +   + I+ 
Sbjct: 64  GVIAVLIGKYLMGTTGAMIAGIAVVCGHNWPVFLKFRGGKGIATSVGVVMTVSPLLGIIA 123

Query: 135 SAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRL 194
            AI ++   +T Y S+ S+  ++   ++  I +    + +    +     ++H  NIKRL
Sbjct: 124 LAIGVAIIALTKYVSLGSITGSVTFVLLNAIFWNSTQLFVFSLILASLAIFQHRSNIKRL 183

Query: 195 ILGSEKKIFKK 205
           + G+E K+ +K
Sbjct: 184 LAGTESKLGQK 194


>gnl|CDD|172868 PRK14392, PRK14392, membrane protein; Provisional.
          Length = 207

 Score =  102 bits (257), Expect = 5e-23
 Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           I+  IL+Y IG+IP G+ + ++F   DIR  GSGNIG TN  R          L LD +K
Sbjct: 4   ILMFILAYLIGAIPSGVWIGKLFYHTDIRQAGSGNIGTTNTYRVLGPVAGTIVLVLDILK 63

Query: 75  AT--ATIIIVSELFDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAI 132
            T  A++ I+  +  H + +L G A  LGH F ++++FKGGK ++T  G+L+A      +
Sbjct: 64  GTLAASLPILFGISHHWLPLLVGLAAVLGHTFSIFIRFKGGKAVATSAGILLAYNPPFFV 123

Query: 133 LFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIK 192
           + SAIW S  L+T   S++S+   ++I  II + Y +  +  +   +T+ V+++H  NIK
Sbjct: 124 IASAIWFSLILLTSMVSVASMIGMVLIT-IISLVYHDWLLTTVACGLTVVVFYRHRSNIK 182

Query: 193 RLILGSE 199
           R+  G+E
Sbjct: 183 RIKAGTE 189


>gnl|CDD|184666 PRK14415, PRK14415, membrane protein; Provisional.
          Length = 216

 Score =  103 bits (257), Expect = 5e-23
 Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 21/210 (10%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           ++ +I+SY +GSIPFG L++      DIRS GSG  GATNVLRT  +K A    SLD IK
Sbjct: 7   LLVVIVSYILGSIPFGYLVSHRGSKIDIRSFGSGRTGATNVLRTMGRKAALLVASLDVIK 66

Query: 75  ATATIIIVSELFDHK---IG----------ILAGFATFLGHIFPVWLKFKGGKGISTYIG 121
             + +     +   +    G          +LAG A   GHI+PV+LKF+GG+G++T+ G
Sbjct: 67  GASAVAFAGLVIGTEALAFGTNGMALLFAQVLAGLAAVAGHIWPVFLKFRGGRGVATFFG 126

Query: 122 VLIALELKMAILFSAIWMSSALVTGYSSISSLFS-----TLIIAMIIWITYP-EVNIPII 175
            +IAL    AI    + +  A ++G++S+ S+        L++ + +   +P E  I  +
Sbjct: 127 GMIALCPVAAIFGGEVLIIGAGLSGFASLGSITGVVGAYALLVPLTLISGFPTEYMIYAV 186

Query: 176 FTFMTITVYWKHIENIKRLILGSEKKIFKK 205
              + IT+   H +NIKRL+ G E+K+ +K
Sbjct: 187 IGSLLITIM--HRDNIKRLLAGKERKLNEK 214


>gnl|CDD|184669 PRK14418, PRK14418, membrane protein; Provisional.
          Length = 236

 Score =  102 bits (256), Expect = 7e-23
 Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 33/229 (14%)

Query: 10  ELIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLS 69
            ++  +   +L Y IGSI F +++++ F   DIR  GS N GATN LR    K+A    +
Sbjct: 6   SILINLALFLLGYLIGSINFSIIVSKRFKKDDIREHGSKNAGATNSLRNFGAKIALVVFA 65

Query: 70  LDAIKATATIIIVSELFDHK--------IGILAGFATFLGHIFPVWLKFKGGKGISTYIG 121
           LD +K    I+IVS + +          I    G    +GHIFP++ KFKGGKG +  +G
Sbjct: 66  LDVLKTLLAILIVSIVVNFVPAVNAFYVIPQAVGLGVVIGHIFPIYFKFKGGKGAACTVG 125

Query: 122 VLIALELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNI--------- 172
           ++I++ + +A++   I++    +    S+ SL +   + + +WI +              
Sbjct: 126 LIISINIILALIAGIIFLLVIFIWKIVSLGSLITAFSLLLFMWIPWMSQGPLGYWTYAVE 185

Query: 173 ---------------PIIFTFMTITVYWKHIENIKRLILGSEKKI-FKK 205
                          PII+T   + V W H ENIKRLI  SE+K  FKK
Sbjct: 186 YTNSFTTLVGYWYVSPIIYTLAALLVLWSHRENIKRLIKKSERKFKFKK 234


>gnl|CDD|172875 PRK14399, PRK14399, membrane protein; Provisional.
          Length = 258

 Score = 96.5 bits (240), Expect = 5e-21
 Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 7/160 (4%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           I++ +  Y +GSI + +++ +  G  DIR++GSGN GATN +R   KK       LDA+K
Sbjct: 12  ILASVFGYFLGSISWSIIIVKKVGNIDIRTVGSGNPGATNTVRILGKKWGLVVAFLDALK 71

Query: 75  ATATIIIV-------SELFDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALE 127
              T I         +ELF      +      +GH +P++ KFKGGK +S ++G+L  + 
Sbjct: 72  VLFTAIFAILLSMIPNELFSQTSYFIPCIFALIGHCWPIYYKFKGGKAVSCFLGLLFVVN 131

Query: 128 LKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITY 167
               I+F  +W  S  ++   S++S+FS   I +I+WI Y
Sbjct: 132 YLYLIIFLIVWFISVAISRKVSVASIFSAATILLIMWIPY 171


>gnl|CDD|172885 PRK14409, PRK14409, membrane protein; Provisional.
          Length = 205

 Score = 91.8 bits (228), Expect = 1e-19
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 10/194 (5%)

Query: 16  ISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKA 75
           I  + S+  GSIPFG  +   F   DIR  GS NIGATNV R    K  F  L LDA+K 
Sbjct: 4   IFALFSFISGSIPFGYWIALRFRGIDIRKHGSKNIGATNVGRVIGWKFGFIVLLLDALKG 63

Query: 76  TATIIIVSELFDH---KIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAI 132
              + + +           +L G    LGH+F  +L FKGGKG++T +GV + L     +
Sbjct: 64  AVPVYLSASYIPEGGVPFQLLCGVVAVLGHMFSPFLGFKGGKGVATTLGVFLVLTPIACV 123

Query: 133 LFSAIWMSSALVTGYSSISSLFSTLIIAMI-----IWITYPEVNIPIIFT--FMTITVYW 185
               ++     +  + S+ S+F++L + ++     I + + EV+  I+ T  F++  +  
Sbjct: 124 GAIVVFFVVYKIFKFVSLGSIFASLTLPLVYAFSSILLLHEEVSYWILGTMVFISFGIIL 183

Query: 186 KHIENIKRLILGSE 199
            H ENI+R++  SE
Sbjct: 184 THRENIRRILNRSE 197


>gnl|CDD|184662 PRK14410, PRK14410, membrane protein; Provisional.
          Length = 235

 Score = 90.2 bits (224), Expect = 3e-19
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           +  L +SY IGSIP  ++  ++    DIR+ GSGN G TN  R    K       +D  K
Sbjct: 5   LAILAVSYLIGSIPTSIIAGKLLKGIDIRNFGSGNAGGTNAFRVLGWKAGLLVTLIDIGK 64

Query: 75  ATATIIIVSELFDHK------------IGILAGFATFLGHIFPVWLKFKGGKGISTYIGV 122
                + V   F               + +LAG +  +GH+F V+  FKGGKG+ST  G+
Sbjct: 65  GVVAAVSVVAFFRIHPIGAFPDINEVALRLLAGMSAVIGHVFTVFAGFKGGKGVSTAAGM 124

Query: 123 LIALELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWI--------TYPEVNIPI 174
           LI +     ++   +++   L + Y S++S+ + +   +II I        +  +  I +
Sbjct: 125 LIGIAPVSMLIVLGVFLLVVLSSRYVSVASILAAIAFPLIIAIRKYVFELGSGLDYYIRL 184

Query: 175 IFT-----------------FMTITVYWKHIENIKRLILGSEKKI 202
                                + + + + H  NI+RL+ G+E ++
Sbjct: 185 FGESFSFHDSLDYHLLIFGLIVALAIIYTHRANIRRLLSGTENRV 229


>gnl|CDD|172871 PRK14395, PRK14395, membrane protein; Provisional.
          Length = 195

 Score = 88.5 bits (219), Expect = 1e-18
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 2/189 (1%)

Query: 18  LILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATA 77
            I++Y +G+IPF     R  G  D+R  GSGNIG TN  R    KL    L  DA+K   
Sbjct: 7   FIIAYLLGAIPFAYWAGRYKGM-DVRKHGSGNIGTTNAFRLLGAKLGVLVLLGDALKGAL 65

Query: 78  TIIIVSELFDHKIGILAGFATFLGHIFPVWLKFK-GGKGISTYIGVLIALELKMAILFSA 136
              +    F    GI+AG     GH +  +  FK  GKG+++  G+++ L  K+ ++   
Sbjct: 66  AAYLGYRFFGPWGGIIAGLLAMAGHSWNPFFGFKPSGKGVASGFGIILVLMPKITVMAIV 125

Query: 137 IWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIENIKRLIL 196
           +++    +T Y S+ S+ + L + +++++    +   +        V  +H  NI+R++ 
Sbjct: 126 LFVLVVFLTRYVSVGSVLAALTVGILVFLFNEPMAYKVFAVIAVSGVVIRHRTNIQRVLK 185

Query: 197 GSEKKIFKK 205
           G+E K   K
Sbjct: 186 GTENKFNLK 194


>gnl|CDD|172883 PRK14407, PRK14407, membrane protein; Provisional.
          Length = 219

 Score = 83.8 bits (207), Expect = 3e-17
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 20/213 (9%)

Query: 12  IAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLD 71
           IA  + L ++Y +GS P G L  ++    DIR  GS + GATNVLRT  K  A   L +D
Sbjct: 5   IAGAVGLAIAYLLGSTPTGYLAGKLLKGIDIREHGSKSTGATNVLRTLGKWPAVVVLLVD 64

Query: 72  AIKATATIIIVS--------------------ELFDHKIGILAGFATFLGHIFPVWLKFK 111
            +K    I+                       +  +     LAG A  LGH   VWL F 
Sbjct: 65  VLKGVGAIVFARWFCQWLSTVPSATPPAALDLQSLEPWAVCLAGLAVLLGHGRSVWLNFT 124

Query: 112 GGKGISTYIGVLIALELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVN 171
           GGK ++  +GVL+A+   + +  + ++  +  ++   S+SS+ + L    ++      + 
Sbjct: 125 GGKSVAAGLGVLLAMSWPVGLGAATVFGVALAISRIVSLSSMLAALTAIALVCGLEQPLP 184

Query: 172 IPIIFTFMTITVYWKHIENIKRLILGSEKKIFK 204
             ++     + V  +H  NI+RL+ G+E ++ K
Sbjct: 185 YRLLVIAGGVYVIVRHRANIRRLLAGTEPRLGK 217


>gnl|CDD|184668 PRK14417, PRK14417, membrane protein; Provisional.
          Length = 232

 Score = 79.5 bits (196), Expect = 5e-16
 Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           +I +   Y +G+IP   LL+R     DIR  GSGN+GA+NV++T+ K+L  A    D  K
Sbjct: 6   LIMIPAGYLVGAIPMAYLLSRWRRGIDIRRYGSGNVGASNVIKTAGKRLGLAVFVFDVSK 65

Query: 75  ATATIIIVSEL-FDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIAL 126
               I++   L  +    I+ G AT  GH +PV+L+F GG+GI+T +GV + +
Sbjct: 66  GALMILLAGWLGLELWQQIVVGLATIAGHNWPVFLRFNGGRGIATSLGVALVM 118


>gnl|CDD|184665 PRK14414, PRK14414, membrane protein; Provisional.
          Length = 210

 Score = 78.0 bits (192), Expect = 2e-15
 Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 9   HELIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATL 68
           + LI  II+LI +Y IGS P   L  R+F   DIR++GS N+G+ NV            L
Sbjct: 2   NSLIMVIIALIAAYFIGSTPAPYLAGRIFKGIDIRTVGSKNMGSMNVFYNVGFWPGILVL 61

Query: 69  SLDAIKATATIIIVSELFDHK-IGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALE 127
           ++D  K    + + + L +   I +L       GH +PVWLKFKGGKG +T IG+L  + 
Sbjct: 62  AVDIGKGALAMAVANWLGEGLGIQMLCALMAIAGHNYPVWLKFKGGKGGATAIGILAYMM 121

Query: 128 LKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITV 183
            +   ++ A ++    +T + ++S   S +   ++ W+   ++   ++F+ + + +
Sbjct: 122 PEGIPIYIACFLILMAITRFPTLSYGISFISFILVAWLGQHDM-GKVLFSLLVVMI 176


>gnl|CDD|172889 PRK14413, PRK14413, membrane protein; Provisional.
          Length = 197

 Score = 76.4 bits (188), Expect = 4e-15
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIK 74
           II+ ++S+ +GSIP G  +T+     DIR+ GSGNIG+TNV R    K++  T  +D +K
Sbjct: 4   IITSVISFLLGSIPTGYFITKKLCGIDIRTKGSGNIGSTNVKRIVGTKISIITQIIDVLK 63

Query: 75  ATATI---IIVSELFDHKIGI-----LAGFATFLGHIFPVWLKFKGGKGISTYIGVLIAL 126
               +   I +S++    +       +   A  LGH +  +LKFKGGKG++T +GV I +
Sbjct: 64  GIIPVVLGISLSKIVKLPVSTDTYLSIIAIAAILGHDYTPFLKFKGGKGVNTTLGVFIFI 123

Query: 127 ELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWK 186
                +   A++    L T   SI S+   + I ++  IT   + I I  T   I +  +
Sbjct: 124 APIPTLTGLAVYFILGLFTRIVSIRSIAIGITIPIMCIITKLPIQIIISTTIACILMIIR 183

Query: 187 HIENIKRLILGSEK 200
           H +N+ RLI   EK
Sbjct: 184 HKDNLVRLIRNEEK 197


>gnl|CDD|172884 PRK14408, PRK14408, membrane protein; Provisional.
          Length = 257

 Score = 76.2 bits (187), Expect = 5e-15
 Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 15/170 (8%)

Query: 11  LIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSL 70
           ++  IIS + SY IGS+   ++L+ +F  QD+R   S N G TN++R   KKL   TL L
Sbjct: 12  ILTLIISPLYSYLIGSLNASIILSLVFKKQDVRLFASKNAGMTNMIRVHGKKLGILTLFL 71

Query: 71  DAIKATATI--------------IIVSELFDHKIGI-LAGFATFLGHIFPVWLKFKGGKG 115
           D IK   T+                +S  F+  I +   G  T +GH +P++ KF+GGKG
Sbjct: 72  DIIKPITTVSLTYIIYKYALDAPFDLSNGFNQAILVYFGGIFTIIGHCYPIFFKFQGGKG 131

Query: 116 ISTYIGVLIALELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWI 165
           ++ Y G LI ++  +A++     +   L+T Y S+S++ +      ++ +
Sbjct: 132 VACYGGFLITVDPIVALIGIITLLVILLITKYMSLSAMITATFTCFLVLV 181


>gnl|CDD|184667 PRK14416, PRK14416, membrane protein; Provisional.
          Length = 200

 Score = 70.7 bits (173), Expect = 3e-13
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 24  IGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATATIIIVS 83
           +GSIP   L+TR    +DIR +G GN+G  N  R        A + +D +K    + +  
Sbjct: 2   LGSIPSAYLVTRRLTGRDIRQMGGGNVGGLNTFREVGTGAGIAVVFIDLVKGALAVSVSY 61

Query: 84  ELF--DHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALE---------LKMAI 132
            L   + +  IL GFA  +GH + VWL FKGGKG+    G ++ L            +A+
Sbjct: 62  YLLTQNAQWVILTGFAAVIGHNWSVWLDFKGGKGLGPAFGAMLFLLPVYGLPQQLGILAL 121

Query: 133 LFSAIWMSS---ALVTGYSSISSLFST 156
           L       +   AL TG +  S  F  
Sbjct: 122 LVFIPLALTRNIALATGIALFSLPFLV 148


>gnl|CDD|184663 PRK14411, PRK14411, membrane protein; Provisional.
          Length = 204

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 3/192 (1%)

Query: 12  IAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLD 71
           +A   + ++ Y  G+    +++ ++F  +D    GSGN G  N+     KK    T   D
Sbjct: 1   MARFWATLIGYVFGNFLTAMIVGKIFLHKDPTKYGSGNPGTANMGAVFGKKWGILTCIGD 60

Query: 72  AIKATATIIIVSELFDHKIGI-LAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKM 130
            +K    + IV  ++   + I  AG    LGH FP+W  FKGGKG++    V +  + + 
Sbjct: 61  LLKTLIALFIVYFIYHGHLNIAYAGLGVVLGHCFPIWNHFKGGKGVAVTAQVAVFYDWRA 120

Query: 131 AILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNIPIIFTFMTITVYWKHIEN 190
            ++   I +    +    +I  L   L+ ++  +    E    ++F  +T+ + +K  ++
Sbjct: 121 GLITLLIALVLTAIMQNLTIPPLVFMLLFSIYTFWNNQEAG--LVFLIITLIMIFKFRKD 178

Query: 191 IKRLILGSEKKI 202
           I     G  K++
Sbjct: 179 IVDFFTGHGKRV 190


>gnl|CDD|184660 PRK14404, PRK14404, membrane protein; Provisional.
          Length = 201

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 3/110 (2%)

Query: 19  ILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATAT 78
           +L +  GS+ F   + ++ G +D+R +  GN GA N+ R +  K     L LD +K    
Sbjct: 7   LLQFLSGSLMFSYWIGKIVG-KDLRKVRDGNPGAFNLWRAAGWKYGLLGLFLDFLKGYFP 65

Query: 79  IIIVSEL--FDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIAL 126
           ++   E    +  + I+A  A  LGH F  +LKFKGGK I+T  GV  AL
Sbjct: 66  LVYFVEKGYINGWVIIIAALAGILGHAFSPFLKFKGGKAIATTFGVWSAL 115


>gnl|CDD|184658 PRK14401, PRK14401, membrane protein; Provisional.
          Length = 187

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 18  LILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTSNKKLAFATLSLDAIKATA 77
            +L+Y +GS+  G+L +R  G +DIR       G +   R      A    + D +K  A
Sbjct: 6   AVLAYLLGSLVAGVLYSRARG-EDIR--ERDLPGGSGTYRQFGPGAALLVAAADILKGVA 62

Query: 78  TIIIVSELFDHKIGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIAL 126
             ++   L       LAG A   GH +PV+ +F+GG GI+  +G  + L
Sbjct: 63  AALLARWLAPPAT-WLAGAAVVAGHCWPVFFRFRGGGGIAPTLGFFLVL 110


>gnl|CDD|184220 PRK13663, PRK13663, hypothetical protein; Provisional.
          Length = 493

 Score = 29.9 bits (68), Expect = 0.48
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 17/52 (32%)

Query: 71  DAIKATATIIIV--------------SELF-DHKIGILAGFATFLGHIFPVW 107
           D I+ T  +++V              S+L+ D K GI AG+A F    FPVW
Sbjct: 162 DYIETTRPLVVVTAPGPGSGKLATCLSQLYHDQKRGIKAGYAKF--ETFPVW 211


>gnl|CDD|149841 pfam08903, DUF1846, Domain of unknown function (DUF1846).  This
           family of proteins are functionally uncharacterized.
           Some members of the family are annotated as
           ATP-dependent peptidases. However, we can find no
           support for this annotation.
          Length = 491

 Score = 28.8 bits (65), Expect = 1.0
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 17/52 (32%)

Query: 71  DAIKATATIIIV--------------SELF-DHKIGILAGFATFLGHIFPVW 107
           + I+ T  +++V              S+L+ +HK GI AG+A F    FP+W
Sbjct: 161 EYIETTRPLVVVTAPGPGSGKLATCLSQLYHEHKRGIKAGYAKF--ETFPIW 210


>gnl|CDD|181775 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone
           4-phosphate synthase/GTP cyclohydrolase II protein;
           Provisional.
          Length = 339

 Score = 27.2 bits (61), Expect = 3.2
 Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 10/62 (16%)

Query: 58  TSNKKLAFATLSLDAIKATATIIIVSELFDHKIGILAGFAT----FL--GHIFPVWLKFK 111
           TSN + AF T+S+DA K   T I   E  D  I +LA   +    F+  GHIFP+  K  
Sbjct: 78  TSNHETAF-TVSIDA-KEATTGISAFER-DMTIKLLADDTSKPSDFVRPGHIFPLIAK-D 133

Query: 112 GG 113
           GG
Sbjct: 134 GG 135


>gnl|CDD|151521 pfam11076, YbhQ, Putative inner membrane protein YbhQ.  This family
           is conserved in Proteobacteria. The function is not
           known but most members are annotated as being inner
           membrane protein YbhQ.
          Length = 133

 Score = 27.2 bits (60), Expect = 3.3
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 113 GKGISTYIGVLIALELKMAILFSAIWMSSALVTGYSSISSLFSTLIIAMIIWITYPEVNI 172
             G+S +    I L L +  L    WMS ALV+    + +L++  ++AM++   + E   
Sbjct: 10  ATGLSCWQ---IMLHLLVVALLVMGWMSGALVSVGLGLCALYALTVVAMLVLQRHHEPRW 66

Query: 173 PIIFTFM-TITVYW 185
             +  F+  +T  W
Sbjct: 67  REVADFLEELTTTW 80


>gnl|CDD|131367 TIGR02314, ABC_MetN, D-methionine ABC transporter, ATP-binding
           protein.  Members of this family are the ATP-binding
           protein of the D-methionine ABC transporter complex.
           Known members belong to the Proteobacteria.
          Length = 343

 Score = 26.4 bits (58), Expect = 5.5
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 15  IISLILSYAIGSIPFGLLLTRMFGFQD 41
           I+S  + YA G + FG++L  M G Q 
Sbjct: 296 ILSSQMDYA-GGVKFGIMLAEMHGTQQ 321


>gnl|CDD|131112 TIGR02057, PAPS_reductase, phosphoadenosine phosphosulfate
          reductase, thioredoxin dependent.  Requiring
          thioredoxin as an electron donor, phosphoadenosine
          phosphosulfate reductase catalyzes the reduction of
          3'-phosphoadenylylsulfate (PAPS) to sulfite and
          phospho-adenosine-phosphate (PAP). Found in
          enterobacteria, cyanobacteria, and yeast, PAPS
          reductase is related to a group of plant (TIGR00424)
          and bacterial (TIGR02055) enzymes preferring
          5'-adenylylsulfate (APS) over PAPS as a substrate for
          reduction to sulfite.
          Length = 226

 Score = 26.3 bits (58), Expect = 5.6
 Identities = 9/27 (33%), Positives = 18/27 (66%)

Query: 19 ILSYAIGSIPFGLLLTRMFGFQDIRSI 45
          I++++I + P GL+ T  FG Q + ++
Sbjct: 16 IIAWSIVTFPHGLVQTSAFGIQALVTL 42


>gnl|CDD|150023 pfam09195, Endonuc-BglII, Restriction endonuclease BglII.  Members
           of this family are predominantly found in prokaryotic
           restriction endonuclease BglII, and adopt a structure
           consisting of an alpha/beta core containing a
           six-stranded beta-sheet surrounded by five
           alpha-helices, two of which are involved in
           homodimerization of the endonuclease. They recognize the
           double-stranded DNA sequence AGATCT and cleave after
           A-1, resulting in specific double-stranded fragments
           with terminal 5'-phosphates.
          Length = 153

 Score = 26.1 bits (58), Expect = 6.4
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 2   NNLQFAYHELIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSG 48
            N  F Y +L+       L +   +I  G+++T    F  I  IGSG
Sbjct: 85  GNYDFFYRDLLK----FQLFHNSDAIDVGIIITPTKSFAKI--IGSG 125


>gnl|CDD|180477 PRK06223, PRK06223, malate dehydrogenase; Reviewed.
          Length = 307

 Score = 25.5 bits (57), Expect = 9.1
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 17/63 (26%)

Query: 45  IGSGNIGATNVLRTSNKKLAFATLSLDAIKATATIIIVSELFDHKIGILAGFATFLGHIF 104
           IG+GN+GAT         LA     L A+K    ++    LFD   G+  G A  +    
Sbjct: 8   IGAGNVGAT---------LAH----LLALKELGDVV----LFDIVEGVPQGKALDIAEAA 50

Query: 105 PVW 107
           PV 
Sbjct: 51  PVE 53


>gnl|CDD|162521 TIGR01763, MalateDH_bact, malate dehydrogenase, NAD-dependent.
          The annotation of Botryococcus braunii as lactate
          dehydrogenase appears top be in error. This was
          initially annotated as MDH by Swiss-Prot and then
          changed. The rationale for either of these annotations
          is not traceable.
          Length = 305

 Score = 25.6 bits (56), Expect = 9.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 42 IRSIGSGNIGATNVLRTSNKKLA 64
          I  IG+G +GAT   R + K+LA
Sbjct: 4  ISVIGAGFVGATTAFRLAEKELA 26


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.328    0.142    0.417 

Gapped
Lambda     K      H
   0.267   0.0726    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 3,351,245
Number of extensions: 214277
Number of successful extensions: 834
Number of sequences better than 10.0: 1
Number of HSP's gapped: 768
Number of HSP's successfully gapped: 98
Length of query: 205
Length of database: 5,994,473
Length adjustment: 89
Effective length of query: 116
Effective length of database: 4,071,361
Effective search space: 472277876
Effective search space used: 472277876
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.0 bits)