HHsearch alignment of GI: 254780303 and MMDB domain: 1b43_A_212-288

>1b43_A (A:212-288) Protein (FEN-1); nuclease, DNA repair, DNA replication; 2.00A {Pyrococcus furiosus}

Probab=90.44  E-value=0.085  Score=31.18  Aligned_cols=45  Identities=11%  Similarity=0.155  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             7889999999999986-------58968999999999749999999970999
Q gi|254780303|r   11 VSLTDDQKISWLRLIR-------SDNISPATCRDMINYFGSAEQALEMIPEL   55 (77)
Q Consensus        11 ~~ls~~erlawLRL~R-------t~~VGp~Tf~~Ll~~fGsA~aAL~aLP~l   55 (77)
                      .-++..+-++..=|.=       -++|||.|..+||+.|||-++.++.+.++
T Consensus         8 ~g~~~~q~id~~~L~G~d~ni~GV~GiG~ktA~kli~~~gsle~i~~~~~~~   59 (77)
T 1b43_A            8 LKLTREKLIELAILVGTDYNPGGIKGIGLKKALEIVRHSKDPLAKFQKQSDV   59 (77)
T ss_dssp             HTCCHHHHHHHHHHHCCTTSTTCSTTCCHHHHHHHHHTCSSGGGGTGGGCSS
T ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCC
T ss_conf             2978999999999728665656589624999999999959999975221001