HHsearch alignment of GI: 254780303 and MMDB domain: 1rxw_A_221-288

>1rxw_A (A:221-288) Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase/DNA complex; 2.00A {Archaeoglobus fulgidus}
Probab=93.07  E-value=0.089  Score=31.08  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=34.0

Q ss_pred             CHHHHHHHHHHHHC------CCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             99999999999865------896899999999974999999997099999
Q gi|254780303|r   14 TDDQKISWLRLIRS------DNISPATCRDMINYFGSAEQALEMIPELAQ   57 (77)
Q Consensus        14 s~~erlawLRL~Rt------~~VGp~Tf~~Ll~~fGsA~aAL~aLP~la~   57 (77)
                      |.++-+++.-|.=|      ++|||.|-.+||+.|||-+..++++-++..
T Consensus         1 t~~q~~d~~~L~GsD~~pGV~GIG~ktA~~li~~~~sle~i~~~~~~~~~   50 (68)
T 1rxw_A            1 TREQLIDIAILVGTDYNEGVKGVGVKKALNYIKTYGDIFRALKALKVNID   50 (68)
T ss_dssp             CHHHHHHHHHHHCBTTBCCCTTCCHHHHHHHHHHHSSHHHHHHHHTC---
T ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCHH
T ss_conf             49999899983397435899995789999999994999999998761427