HHsearch results for GI: 254780303 and protein with PDBid: 2a1j_A

>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=90.77  E-value=0.17  Score=28.62  Aligned_cols=37  Identities=14%  Similarity=0.312  Sum_probs=28.1

Q ss_pred             HHHCCCCCHHHHHHHHHHCCCHHHHHHHHH-HHHHHHC
Q ss_conf             986589689999999997499999999709-9999614
Q gi|254780303|r   24 LIRSDNISPATCRDMINYFGSAEQALEMIP-ELAQRGA   60 (77)
Q Consensus        24 L~Rt~~VGp~Tf~~Ll~~fGsA~aAL~aLP-~la~rgG   60 (77)
                      |..-|+||+.+...|+.+|||-.+...|-. +|..--|
T Consensus         6 L~~IPGIg~~~~~~Ll~~fgSi~~l~~as~eeL~~v~G   43 (63)
T 2a1j_A            6 LLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILG   43 (63)
T ss_dssp             HHTSTTCCHHHHHHHHHHCSSHHHHHTCCHHHHHHHHS
T ss_pred             HHCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHCCC
T ss_conf             85299988999999999867999998799999987869