HHSEARCH alignment of GI: 254780303 and SCOP domain: d1x2ia1

Alignment

Probab=90.81  E-value=0.21  Score=26.73  Aligned_cols=42  Identities=19%  Similarity=0.222  Sum_probs=31.0

Q ss_pred             CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             8999999999998658968999999999749999999970999
Q gi|254780303|r   13 LTDDQKISWLRLIRSDNISPATCRDMINYFGSAEQALEMIPEL   55 (77)
Q Consensus        13 ls~~erlawLRL~Rt~~VGp~Tf~~Ll~~fGsA~aAL~aLP~l   55 (77)
                      |+-.|+.-. -|---|+|||.+...|+++|||-++.+.|-.+-
T Consensus         2 ~~~~~~~~~-~L~~I~gIG~~~a~~L~~~f~s~~~i~~As~ee   43 (68)
T d1x2ia1           2 LTLAERQRL-IVEGLPHVSATLARRLLKHFGSVERVFTASVAE   43 (68)
T ss_dssp             CCHHHHHHH-HHTTSTTCCHHHHHHHHHHHCSHHHHHHCCHHH
T ss_pred             CCHHHHHHH-HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             988999999-981899968999999999749999998858999

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: Hef domain-like
domain: ATP-dependent RNA helicase PF2015
species: Pyrococcus furiosus [TaxId: 2261]