BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780304|ref|YP_003064717.1| DNA protecting protein DprA
[Candidatus Liberibacter asiaticus str. psy62]
(34 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780304|ref|YP_003064717.1| DNA protecting protein DprA [Candidatus Liberibacter asiaticus
str. psy62]
gi|254039981|gb|ACT56777.1| DNA protecting protein DprA [Candidatus Liberibacter asiaticus
str. psy62]
Length = 34
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/34 (100%), Positives = 34/34 (100%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG
Sbjct: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
>gi|315122272|ref|YP_004062761.1| hypothetical protein CKC_02620 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495674|gb|ADR52273.1| hypothetical protein CKC_02620 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 298
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLDCLYPPENR+LLEEIW GIAISE+PFG
Sbjct: 179 MAGGLDCLYPPENRSLLEEIWHE-GIAISEMPFG 211
>gi|222085614|ref|YP_002544144.1| DNA protecting protein DprA [Agrobacterium radiobacter K84]
gi|221723062|gb|ACM26218.1| DNA protecting protein DprA [Agrobacterium radiobacter K84]
Length = 383
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD YPPEN LL EIWD G+A+SE+PFG
Sbjct: 178 MAGGLDQPYPPENVGLLNEIWDGNGLAVSEMPFG 211
>gi|222148310|ref|YP_002549267.1| DNA protecting protein DprA [Agrobacterium vitis S4]
gi|221735298|gb|ACM36261.1| DNA protecting protein DprA [Agrobacterium vitis S4]
Length = 383
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN +LL++IWD G+AISE+PFG
Sbjct: 178 LAGGLDRPYPPENVDLLKDIWDGKGVAISEMPFG 211
>gi|150396156|ref|YP_001326623.1| DNA protecting protein DprA [Sinorhizobium medicae WSM419]
gi|150027671|gb|ABR59788.1| DNA protecting protein DprA [Sinorhizobium medicae WSM419]
Length = 383
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI GG+AISE+PFG
Sbjct: 178 LAGGLDRPYPPENIGLLQEIVSGGGLAISEMPFG 211
>gi|319405728|emb|CBI79351.1| DNA processing chain A [Bartonella sp. AR 15-3]
Length = 383
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 167 MAGGIDYIYPPENKKLYDDILTNGGAIISEMPIG 200
>gi|49475582|ref|YP_033623.1| DNA processing chain A [Bartonella henselae str. Houston-1]
gi|49238389|emb|CAF27616.1| DNA processing chain A [Bartonella henselae str. Houston-1]
Length = 410
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L E+I NGG ISE+P G
Sbjct: 184 MAGGIDHIYPPENKKLHEDIIANGGAIISEMPIG 217
>gi|319898957|ref|YP_004159050.1| DNA processing chain A [Bartonella clarridgeiae 73]
gi|319402921|emb|CBI76472.1| DNA processing chain A [Bartonella clarridgeiae 73]
Length = 383
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 157 MAGGIDHIYPPENKKLYDDILANGGAIISEMPIG 190
>gi|319408534|emb|CBI82187.1| DNA processing chain A [Bartonella schoenbuchensis R1]
Length = 404
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 178 MAGGIDHIYPPENKKLYDDIITNGGAIISEMPVG 211
>gi|319407290|emb|CBI80931.1| DNA processing chain A [Bartonella sp. 1-1C]
Length = 383
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 167 MAGGIDYIYPPENQKLYDDILANGGAIISEMPIG 200
>gi|319404285|emb|CBI77878.1| DNA processing chain A [Bartonella rochalimae ATCC BAA-1498]
Length = 383
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 167 MAGGIDHIYPPENQKLYDDILANGGAIISEMPIG 200
>gi|328543466|ref|YP_004303575.1| DNA protecting protein DprA [polymorphum gilvum SL003B-26A1]
gi|326413210|gb|ADZ70273.1| DNA protecting protein DprA, putative [Polymorphum gilvum
SL003B-26A1]
Length = 380
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYPPE+ LL I D GG AISE+PFG
Sbjct: 179 AGGIDILYPPEHDGLLARILDAGGSAISEMPFG 211
>gi|209548899|ref|YP_002280816.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534655|gb|ACI54590.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 380
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LLEEI G+A+SE+PFG
Sbjct: 178 LAGGLDQPYPPENIGLLEEITSGNGLAVSEMPFG 211
>gi|218674768|ref|ZP_03524437.1| DNA processing chain A protein [Rhizobium etli GR56]
Length = 380
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 178 LAGGLDKPYPPENHGLIEEIAGGNGLAVSEMPFG 211
>gi|116251502|ref|YP_767340.1| smf protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256150|emb|CAK07231.1| putative smf protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 380
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LLEEI G+A+SE+PFG
Sbjct: 178 LAGGLDQPYPPENIGLLEEITGGNGLAVSEMPFG 211
>gi|27380215|ref|NP_771744.1| DNA processing protein [Bradyrhizobium japonicum USDA 110]
gi|27353369|dbj|BAC50369.1| DNA processing protein [Bradyrhizobium japonicum USDA 110]
Length = 380
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG DC+YPPE+ +LL I D+ G AISE+P G
Sbjct: 183 LAGGHDCIYPPEHGDLLTSILDHAGAAISEMPLG 216
>gi|86357273|ref|YP_469165.1| DNA processing chain A protein [Rhizobium etli CFN 42]
gi|86281375|gb|ABC90438.1| probable DNA processing chain A protein [Rhizobium etli CFN 42]
Length = 380
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 178 LAGGLDKPYPPENLGLIEEITGGNGLAVSEMPFG 211
>gi|307301126|ref|ZP_07580895.1| DNA protecting protein DprA [Sinorhizobium meliloti BL225C]
gi|306904081|gb|EFN34667.1| DNA protecting protein DprA [Sinorhizobium meliloti BL225C]
Length = 383
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLLQEIVSGEGLAVSEMPFG 211
>gi|240850661|ref|YP_002972061.1| DNA processing chain A [Bartonella grahamii as4aup]
gi|240267784|gb|ACS51372.1| DNA processing chain A [Bartonella grahamii as4aup]
Length = 404
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
MAGG+D +YPPEN+ L E+I NGG ISE+P
Sbjct: 178 MAGGIDHIYPPENKRLYEDIIANGGAIISEMP 209
>gi|241204123|ref|YP_002975219.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858013|gb|ACS55680.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 380
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LLEEI G+A+SE+PFG
Sbjct: 178 LAGGLDQPYPPENIGLLEEITGGNGLAVSEMPFG 211
>gi|15888630|ref|NP_354311.1| DNA processing chain A [Agrobacterium tumefaciens str. C58]
gi|15156358|gb|AAK87096.1| DNA processing chain A [Agrobacterium tumefaciens str. C58]
Length = 380
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP EN LL++I+D GG ISE+PFG
Sbjct: 178 LAGGLDRPYPQENFGLLQDIYDQGGATISEMPFG 211
>gi|15965054|ref|NP_385407.1| hypothetical protein SMc01363 [Sinorhizobium meliloti 1021]
gi|15074233|emb|CAC45880.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 383
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLLQEIVSGEGLAVSEMPFG 211
>gi|307317859|ref|ZP_07597297.1| DNA protecting protein DprA [Sinorhizobium meliloti AK83]
gi|306896621|gb|EFN27369.1| DNA protecting protein DprA [Sinorhizobium meliloti AK83]
Length = 383
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLLQEIVSGEGLAVSEMPFG 211
>gi|260424749|ref|ZP_05733144.2| DNA processing protein DprA [Dialister invisus DSM 15470]
gi|260403042|gb|EEW96589.1| DNA processing protein DprA [Dialister invisus DSM 15470]
Length = 363
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YPPEN+NL ++I DNGG ISE P G
Sbjct: 170 LACGLDHVYPPENKNLFQKIIDNGGTIISEYPPG 203
>gi|190891322|ref|YP_001977864.1| DNA processing chain A protein [Rhizobium etli CIAT 652]
gi|190696601|gb|ACE90686.1| DNA processing chain A protein [Rhizobium etli CIAT 652]
Length = 380
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLIEEIAGGNGLAVSEMPFG 211
>gi|218513189|ref|ZP_03510029.1| DNA processing chain A protein [Rhizobium etli 8C-3]
Length = 352
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 165 LAGGLDRPYPPENLGLIEEIAGGNGLAVSEMPFG 198
>gi|227821656|ref|YP_002825626.1| DNA processing chain A [Sinorhizobium fredii NGR234]
gi|227340655|gb|ACP24873.1| DNA processing chain A [Sinorhizobium fredii NGR234]
Length = 386
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+AISE+PFG
Sbjct: 178 LAGGLDRPYPPENIGLLQEITAGEGLAISEMPFG 211
>gi|163868294|ref|YP_001609503.1| DNA processing chain A [Bartonella tribocorum CIP 105476]
gi|161017950|emb|CAK01508.1| DNA processing chain A [Bartonella tribocorum CIP 105476]
Length = 404
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
MAGG++ +YPPEN+ L E+I NGG ISE+P
Sbjct: 178 MAGGINHIYPPENKKLYEDIIANGGAIISEMP 209
>gi|49474246|ref|YP_032288.1| DNA processing chain A [Bartonella quintana str. Toulouse]
gi|49239750|emb|CAF26132.1| DNA processing chain A [Bartonella quintana str. Toulouse]
Length = 410
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
MAGG+D +YPPEN+ L E+I +GG ISE+P
Sbjct: 184 MAGGVDHIYPPENKKLHEDIITHGGAIISEMP 215
>gi|114707187|ref|ZP_01440085.1| DNA processing chain A [Fulvimarina pelagi HTCC2506]
gi|114537383|gb|EAU40509.1| DNA processing chain A [Fulvimarina pelagi HTCC2506]
Length = 377
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGLD YPPENR+L+ I D GG IS PFG
Sbjct: 177 AGGLDMPYPPENRSLMRRIVDEGGCLISARPFG 209
>gi|304391708|ref|ZP_07373650.1| DNA protecting protein DprA [Ahrensia sp. R2A130]
gi|303295937|gb|EFL90295.1| DNA protecting protein DprA [Ahrensia sp. R2A130]
Length = 378
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYPPEN LL+ I GG AISE+P G
Sbjct: 178 AGGVDHLYPPENGPLLDAILATGGAAISEMPLG 210
>gi|325292667|ref|YP_004278531.1| DNA processing chain A [Agrobacterium sp. H13-3]
gi|325060520|gb|ADY64211.1| DNA processing chain A [Agrobacterium sp. H13-3]
Length = 379
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP EN LL++I++ GG ISE+PFG
Sbjct: 178 LAGGLDRPYPQENFGLLQDIYEEGGATISEMPFG 211
>gi|290968766|ref|ZP_06560303.1| DNA protecting protein DprA [Megasphaera genomosp. type_1 str. 28L]
gi|290781062|gb|EFD93653.1| DNA protecting protein DprA [Megasphaera genomosp. type_1 str. 28L]
Length = 363
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP EN+ L EEI NGG ISE PFG
Sbjct: 172 VASGLDITYPRENKKLFEEIAANGGGIISEYPFG 205
>gi|121602381|ref|YP_989130.1| DNA protecting protein DprA [Bartonella bacilliformis KC583]
gi|120614558|gb|ABM45159.1| DNA protecting protein DprA [Bartonella bacilliformis KC583]
Length = 396
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
MAGG+D +YP EN+ L +I DNGG ISE+P
Sbjct: 172 MAGGIDHIYPSENKKLYNDIIDNGGAIISEMP 203
>gi|218506638|ref|ZP_03504516.1| DNA processing chain A protein [Rhizobium etli Brasil 5]
Length = 167
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 39 LPGGLDRPYPPENLGLIEEIAGGNGLAVSEMPFG 72
>gi|307946437|ref|ZP_07661772.1| DNA protecting protein DprA [Roseibium sp. TrichSKD4]
gi|307770101|gb|EFO29327.1| DNA protecting protein DprA [Roseibium sp. TrichSKD4]
Length = 378
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYPP++ LL + + GG AI+E+PFG
Sbjct: 177 AGGIDILYPPDHAGLLSSLLERGGNAITEMPFG 209
>gi|153010990|ref|YP_001372204.1| DNA protecting protein DprA [Ochrobactrum anthropi ATCC 49188]
gi|151562878|gb|ABS16375.1| DNA protecting protein DprA [Ochrobactrum anthropi ATCC 49188]
Length = 388
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPEN L I + GG ISE+P G
Sbjct: 178 LAGGLDCPYPPENLPLYHAIPEQGGALISEMPMG 211
>gi|163759336|ref|ZP_02166422.1| putative smf protein [Hoeflea phototrophica DFL-43]
gi|162283740|gb|EDQ34025.1| putative smf protein [Hoeflea phototrophica DFL-43]
Length = 383
Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN +L +EI G+AISE+P G
Sbjct: 178 LAGGLDQPYPPENLDLYDEIRAGKGLAISEMPMG 211
>gi|115525378|ref|YP_782289.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisA53]
gi|115519325|gb|ABJ07309.1| DNA protecting protein DprA [Rhodopseudomonas palustris BisA53]
Length = 372
Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL +I GG AISE+P G
Sbjct: 175 LAGGHDRIYPPEHEDLLADILAQGGAAISEMPLG 208
>gi|319783706|ref|YP_004143182.1| DNA protecting protein DprA [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169594|gb|ADV13132.1| DNA protecting protein DprA [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 379
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L EEI + G I ISE+PFG
Sbjct: 175 LAGGLDQPYPPENAGLCEEIAERGAI-ISEMPFG 207
>gi|299135144|ref|ZP_07028335.1| DNA protecting protein DprA [Afipia sp. 1NLS2]
gi|298590121|gb|EFI50325.1| DNA protecting protein DprA [Afipia sp. 1NLS2]
Length = 373
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ LL I D GG AISE+P G
Sbjct: 176 LAGGHDRIYPPEHEGLLAAIIDAGGGAISEMPLG 209
>gi|325290385|ref|YP_004266566.1| DNA protecting protein DprA [Syntrophobotulus glycolicus DSM 8271]
gi|324965786|gb|ADY56565.1| DNA protecting protein DprA [Syntrophobotulus glycolicus DSM 8271]
Length = 383
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD +YPPENR L EI +NG + ISE P G
Sbjct: 172 LAGGLDRIYPPENRKLAAEIIENGAL-ISEYPPG 204
>gi|163792865|ref|ZP_02186841.1| Predicted Rossmann fold nucleotide-binding protein [alpha
proteobacterium BAL199]
gi|159181511|gb|EDP66023.1| Predicted Rossmann fold nucleotide-binding protein [alpha
proteobacterium BAL199]
Length = 379
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YPPE+ LL++I +N GIA++E+P G
Sbjct: 173 LAGGIDVTYPPEHAGLLQQIVEN-GIAVAEMPVG 205
>gi|260459178|ref|ZP_05807433.1| DNA protecting protein DprA [Mesorhizobium opportunistum WSM2075]
gi|259034732|gb|EEW35988.1| DNA protecting protein DprA [Mesorhizobium opportunistum WSM2075]
Length = 383
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L +EI + G + ISE+PFG
Sbjct: 182 LAGGLDLPYPPENAGLCDEIAERGAV-ISEMPFG 214
>gi|260427296|ref|ZP_05781275.1| protein smf [Citreicella sp. SE45]
gi|260421788|gb|EEX15039.1| protein smf [Citreicella sp. SE45]
Length = 398
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP EN L EEI GG +SE P G
Sbjct: 182 LAGGVDVLYPSENTRLAEEIRAQGGAVVSEQPIG 215
>gi|118590183|ref|ZP_01547586.1| hypothetical protein SIAM614_11733 [Stappia aggregata IAM 12614]
gi|118437155|gb|EAV43793.1| hypothetical protein SIAM614_11733 [Stappia aggregata IAM 12614]
Length = 378
Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG++ LYPPE+ LL + + GG ISE+P G
Sbjct: 177 AGGINVLYPPEHDRLLAAVLETGGAVISEMPLG 209
>gi|225677140|ref|ZP_03788139.1| DNA processing chain A [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590807|gb|EEH12035.1| DNA processing chain A [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 362
Score = 40.8 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G+D +YP EN +L ++I +NGG+ ++E+PF
Sbjct: 164 ASGIDVVYPKENFDLYKKITENGGLVVTELPFA 196
>gi|254501021|ref|ZP_05113172.1| DNA protecting protein DprA, putative [Labrenzia alexandrii DFL-11]
gi|222437092|gb|EEE43771.1| DNA protecting protein DprA, putative [Labrenzia alexandrii DFL-11]
Length = 378
Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYP ++ LL I GG ISE+PFG
Sbjct: 177 AGGIDVLYPSDHDRLLAAILQTGGAVISEMPFG 209
>gi|220929474|ref|YP_002506383.1| DNA protecting protein DprA [Clostridium cellulolyticum H10]
gi|219999802|gb|ACL76403.1| DNA protecting protein DprA [Clostridium cellulolyticum H10]
Length = 374
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPEN L ++I D+GG+A+SE P G
Sbjct: 171 LGSGLDNIYPPENAGLFKDIIDSGGLALSEYPPG 204
>gi|303231443|ref|ZP_07318174.1| DNA protecting protein DprA [Veillonella atypica ACS-049-V-Sch6]
gi|302513880|gb|EFL55891.1| DNA protecting protein DprA [Veillonella atypica ACS-049-V-Sch6]
Length = 378
Score = 40.8 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YPPEN+ L + + N G+ +SE P G
Sbjct: 180 MGCGLDIVYPPENKRLFDAVLKNNGLLVSEYPPG 213
>gi|303228920|ref|ZP_07315730.1| DNA protecting protein DprA [Veillonella atypica ACS-134-V-Col7a]
gi|302516334|gb|EFL58266.1| DNA protecting protein DprA [Veillonella atypica ACS-134-V-Col7a]
Length = 378
Score = 40.4 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YPPEN+ L + + N G+ +SE P G
Sbjct: 180 MGCGLDIVYPPENKRLFDAVLKNNGLLVSEYPPG 213
>gi|294678614|ref|YP_003579229.1| DNA protecting protein DprA [Rhodobacter capsulatus SB 1003]
gi|294477434|gb|ADE86822.1| DNA protecting protein DprA [Rhodobacter capsulatus SB 1003]
Length = 383
Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD +YPPENR+L I GG+ ++E+P G
Sbjct: 180 MAGGLDVIYPPENRDLASRI-ATGGLLLAELPPG 212
>gi|90423747|ref|YP_532117.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB18]
gi|90105761|gb|ABD87798.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB18]
Length = 372
Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ LL I GG AISE+P G
Sbjct: 175 LAGGHDKIYPPEHDELLAAILGEGGAAISEMPLG 208
>gi|13470875|ref|NP_102444.1| DNA processing chain A [Mesorhizobium loti MAFF303099]
gi|14021618|dbj|BAB48230.1| DNA processing chain A [Mesorhizobium loti MAFF303099]
Length = 377
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L EI + G + ISE+PFG
Sbjct: 175 LAGGLDLPYPPENAGLCAEIAERGAV-ISEMPFG 207
>gi|58698108|ref|ZP_00373031.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535354|gb|EAL59430.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 346
Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G+D +YP EN +L ++I NGG+ I+E+PF
Sbjct: 148 ASGIDVVYPKENFDLYKKITGNGGLVITELPFA 180
>gi|58696725|ref|ZP_00372270.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
simulans]
gi|225630004|ref|YP_002726795.1| DNA processing chain A [Wolbachia sp. wRi]
gi|58537093|gb|EAL60213.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
simulans]
gi|225591985|gb|ACN95004.1| DNA processing chain A [Wolbachia sp. wRi]
Length = 362
Score = 40.4 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G+D +YP EN +L ++I NGG+ I+E+PF
Sbjct: 164 ASGIDVVYPKENFDLYKKITGNGGLVITELPFA 196
>gi|254796757|ref|YP_003081593.1| DNA processing chain A [Neorickettsia risticii str. Illinois]
gi|254590002|gb|ACT69364.1| DNA processing chain A [Neorickettsia risticii str. Illinois]
Length = 375
Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YP EN+ L E I + GG+ ++E+PFG
Sbjct: 170 GIDQCYPTENQKLQERIIERGGLVVTEVPFG 200
>gi|163844754|ref|YP_001622409.1| DNA protecting protein DprA [Brucella suis ATCC 23445]
gi|163675477|gb|ABY39587.1| DNA protecting protein DprA [Brucella suis ATCC 23445]
Length = 393
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEVPMG 211
>gi|255263932|ref|ZP_05343274.1| DNA protecting protein DprA [Thalassiobium sp. R2A62]
gi|255106267|gb|EET48941.1| DNA protecting protein DprA [Thalassiobium sp. R2A62]
Length = 197
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+DC+YP EN L +I N G+ +SE P G
Sbjct: 153 MAGGVDCIYPSENTELARKIAQN-GVRVSEQPIG 185
>gi|73666848|ref|YP_302864.1| SMF protein [Ehrlichia canis str. Jake]
gi|72393989|gb|AAZ68266.1| SMF protein [Ehrlichia canis str. Jake]
Length = 374
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G++ +YP EN +L + I D GG+ I+E PF
Sbjct: 174 MASGINIVYPQENTHLYKTIIDKGGLIITEFPFA 207
>gi|42520001|ref|NP_965916.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42409738|gb|AAS13850.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 362
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G+D +YP EN +L ++I NGG+ I+E+PF
Sbjct: 164 ASGIDVVYPKENFDLYKKITGNGGLVITELPFA 196
>gi|258541853|ref|YP_003187286.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-01]
gi|256632931|dbj|BAH98906.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-01]
gi|256635988|dbj|BAI01957.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-03]
gi|256639043|dbj|BAI05005.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-07]
gi|256642097|dbj|BAI08052.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-22]
gi|256645152|dbj|BAI11100.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-26]
gi|256648207|dbj|BAI14148.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-32]
gi|256651260|dbj|BAI17194.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654251|dbj|BAI20178.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-12]
Length = 208
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPEN +L EI G + ++E P G
Sbjct: 164 IAGGLDCPYPPENASLQAEIAQKGAV-VTEAPLG 196
>gi|329114375|ref|ZP_08243137.1| Protein Smf [Acetobacter pomorum DM001]
gi|326696451|gb|EGE48130.1| Protein Smf [Acetobacter pomorum DM001]
Length = 412
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPEN +L EI G + ++E P G
Sbjct: 164 IAGGLDCPYPPENASLQAEIAQKGAV-VTEAPLG 196
>gi|92117808|ref|YP_577537.1| DNA processing protein DprA, putative [Nitrobacter hamburgensis
X14]
gi|91800702|gb|ABE63077.1| DNA processing protein DprA, putative [Nitrobacter hamburgensis
X14]
Length = 372
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL I ++GG AISE+P G
Sbjct: 175 LAGGHDRIYPPEHEDLLAAILEDGG-AISEMPMG 207
>gi|190571736|ref|YP_001976094.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019224|ref|ZP_03335031.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190358008|emb|CAQ55476.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995333|gb|EEB55974.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 361
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G+D +YP EN +L ++I +NGG+ ++E+PF
Sbjct: 163 ASGIDVVYPRENFDLYKKITENGGLVMTELPFA 195
>gi|306841750|ref|ZP_07474436.1| DNA protecting protein DprA [Brucella sp. BO2]
gi|306288155|gb|EFM59542.1| DNA protecting protein DprA [Brucella sp. BO2]
Length = 345
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 130 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 163
>gi|260756634|ref|ZP_05868982.1| DNA protecting protein DprA [Brucella abortus bv. 6 str. 870]
gi|260676742|gb|EEX63563.1| DNA protecting protein DprA [Brucella abortus bv. 6 str. 870]
Length = 343
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 128 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 161
>gi|294853600|ref|ZP_06794272.1| DNA processing protein [Brucella sp. NVSL 07-0026]
gi|294819255|gb|EFG36255.1| DNA processing protein [Brucella sp. NVSL 07-0026]
Length = 393
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|256111481|ref|ZP_05452495.1| SMF protein [Brucella melitensis bv. 3 str. Ether]
gi|265992978|ref|ZP_06105535.1| DNA protecting protein DprA [Brucella melitensis bv. 3 str. Ether]
gi|262763848|gb|EEZ09880.1| DNA protecting protein DprA [Brucella melitensis bv. 3 str. Ether]
Length = 388
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|254695655|ref|ZP_05157483.1| SMF protein [Brucella abortus bv. 3 str. Tulya]
gi|261216055|ref|ZP_05930336.1| DNA protecting protein DprA [Brucella abortus bv. 3 str. Tulya]
gi|260917662|gb|EEX84523.1| DNA protecting protein DprA [Brucella abortus bv. 3 str. Tulya]
Length = 393
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|17989012|ref|NP_541645.1| SMF protein [Brucella melitensis bv. 1 str. 16M]
gi|62317541|ref|YP_223394.1| DNA processing protein DprA [Brucella abortus bv. 1 str. 9-941]
gi|83269522|ref|YP_418813.1| SMF protein [Brucella melitensis biovar Abortus 2308]
gi|189022796|ref|YP_001932537.1| SMF protein [Brucella abortus S19]
gi|225629094|ref|ZP_03787127.1| DNA protecting protein DprA [Brucella ceti str. Cudo]
gi|237817089|ref|ZP_04596081.1| DNA protecting protein DprA [Brucella abortus str. 2308 A]
gi|254698822|ref|ZP_05160650.1| SMF protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254705901|ref|ZP_05167729.1| SMF protein [Brucella pinnipedialis M163/99/10]
gi|254711129|ref|ZP_05172940.1| SMF protein [Brucella pinnipedialis B2/94]
gi|254712412|ref|ZP_05174223.1| SMF protein [Brucella ceti M644/93/1]
gi|254715484|ref|ZP_05177295.1| SMF protein [Brucella ceti M13/05/1]
gi|254732269|ref|ZP_05190847.1| SMF protein [Brucella abortus bv. 4 str. 292]
gi|256015379|ref|YP_003105388.1| DNA processing protein DprA, putative [Brucella microti CCM 4915]
gi|256029510|ref|ZP_05443124.1| SMF protein [Brucella pinnipedialis M292/94/1]
gi|256043499|ref|ZP_05446426.1| SMF protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256059205|ref|ZP_05449411.1| SMF protein [Brucella neotomae 5K33]
gi|256157705|ref|ZP_05455623.1| SMF protein [Brucella ceti M490/95/1]
gi|256253323|ref|ZP_05458859.1| SMF protein [Brucella ceti B1/94]
gi|256256223|ref|ZP_05461759.1| SMF protein [Brucella abortus bv. 9 str. C68]
gi|260167399|ref|ZP_05754210.1| DNA processing protein DprA, putative [Brucella sp. F5/99]
gi|260544777|ref|ZP_05820598.1| SMF protein [Brucella abortus NCTC 8038]
gi|260564694|ref|ZP_05835179.1| SMF protein [Brucella melitensis bv. 1 str. 16M]
gi|260760064|ref|ZP_05872412.1| DNA protecting protein DprA [Brucella abortus bv. 4 str. 292]
gi|260763303|ref|ZP_05875635.1| DNA protecting protein DprA [Brucella abortus bv. 2 str. 86/8/59]
gi|260882451|ref|ZP_05894065.1| DNA protecting protein DprA [Brucella abortus bv. 9 str. C68]
gi|261217219|ref|ZP_05931500.1| DNA protecting protein DprA [Brucella ceti M13/05/1]
gi|261220439|ref|ZP_05934720.1| DNA protecting protein DprA [Brucella ceti B1/94]
gi|261313331|ref|ZP_05952528.1| DNA protecting protein DprA [Brucella pinnipedialis M163/99/10]
gi|261318720|ref|ZP_05957917.1| DNA protecting protein DprA [Brucella pinnipedialis B2/94]
gi|261320090|ref|ZP_05959287.1| DNA protecting protein DprA [Brucella ceti M644/93/1]
gi|261323154|ref|ZP_05962351.1| DNA protecting protein DprA [Brucella neotomae 5K33]
gi|261756809|ref|ZP_06000518.1| SMF protein [Brucella sp. F5/99]
gi|265986518|ref|ZP_06099075.1| DNA protecting protein DprA [Brucella pinnipedialis M292/94/1]
gi|265989917|ref|ZP_06102474.1| DNA protecting protein DprA [Brucella melitensis bv. 1 str. Rev.1]
gi|265996210|ref|ZP_06108767.1| DNA protecting protein DprA [Brucella ceti M490/95/1]
gi|297249580|ref|ZP_06933281.1| DNA processing protein [Brucella abortus bv. 5 str. B3196]
gi|17984851|gb|AAL53909.1| smf protein [Brucella melitensis bv. 1 str. 16M]
gi|62197734|gb|AAX76033.1| hypothetical DprA, DNA processing protein [Brucella abortus bv. 1
str. 9-941]
gi|82939796|emb|CAJ12804.1| SMF protein [Brucella melitensis biovar Abortus 2308]
gi|189021370|gb|ACD74091.1| SMF protein [Brucella abortus S19]
gi|225615590|gb|EEH12639.1| DNA protecting protein DprA [Brucella ceti str. Cudo]
gi|237787902|gb|EEP62118.1| DNA protecting protein DprA [Brucella abortus str. 2308 A]
gi|255998039|gb|ACU49726.1| DNA processing protein DprA, putative [Brucella microti CCM 4915]
gi|260098048|gb|EEW81922.1| SMF protein [Brucella abortus NCTC 8038]
gi|260152337|gb|EEW87430.1| SMF protein [Brucella melitensis bv. 1 str. 16M]
gi|260670382|gb|EEX57322.1| DNA protecting protein DprA [Brucella abortus bv. 4 str. 292]
gi|260673724|gb|EEX60545.1| DNA protecting protein DprA [Brucella abortus bv. 2 str. 86/8/59]
gi|260871979|gb|EEX79048.1| DNA protecting protein DprA [Brucella abortus bv. 9 str. C68]
gi|260919023|gb|EEX85676.1| DNA protecting protein DprA [Brucella ceti B1/94]
gi|260922308|gb|EEX88876.1| DNA protecting protein DprA [Brucella ceti M13/05/1]
gi|261292780|gb|EEX96276.1| DNA protecting protein DprA [Brucella ceti M644/93/1]
gi|261297943|gb|EEY01440.1| DNA protecting protein DprA [Brucella pinnipedialis B2/94]
gi|261299134|gb|EEY02631.1| DNA protecting protein DprA [Brucella neotomae 5K33]
gi|261302357|gb|EEY05854.1| DNA protecting protein DprA [Brucella pinnipedialis M163/99/10]
gi|261736793|gb|EEY24789.1| SMF protein [Brucella sp. F5/99]
gi|262550507|gb|EEZ06668.1| DNA protecting protein DprA [Brucella ceti M490/95/1]
gi|263000586|gb|EEZ13276.1| DNA protecting protein DprA [Brucella melitensis bv. 1 str. Rev.1]
gi|264658715|gb|EEZ28976.1| DNA protecting protein DprA [Brucella pinnipedialis M292/94/1]
gi|297173449|gb|EFH32813.1| DNA processing protein [Brucella abortus bv. 5 str. B3196]
Length = 393
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|259046716|ref|ZP_05737117.1| DNA processing chain A [Granulicatella adiacens ATCC 49175]
gi|259036612|gb|EEW37867.1| DNA processing chain A [Granulicatella adiacens ATCC 49175]
Length = 288
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPEN NL +EI + G I ISE P G
Sbjct: 169 IGSGLDVVYPPENANLYKEIGEKGLI-ISEYPLG 201
>gi|254699839|ref|ZP_05161667.1| SMF protein [Brucella suis bv. 5 str. 513]
gi|261750312|ref|ZP_05994021.1| DNA protecting protein DprA [Brucella suis bv. 5 str. 513]
gi|261740065|gb|EEY27991.1| DNA protecting protein DprA [Brucella suis bv. 5 str. 513]
Length = 393
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|225686388|ref|YP_002734360.1| DNA protecting protein DprA [Brucella melitensis ATCC 23457]
gi|256262471|ref|ZP_05465003.1| SMF protein [Brucella melitensis bv. 2 str. 63/9]
gi|225642493|gb|ACO02406.1| DNA protecting protein DprA [Brucella melitensis ATCC 23457]
gi|263092207|gb|EEZ16504.1| SMF protein [Brucella melitensis bv. 2 str. 63/9]
Length = 393
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|23500346|ref|NP_699786.1| DNA processing protein DprA [Brucella suis 1330]
gi|161620664|ref|YP_001594550.1| DNA protecting protein DprA [Brucella canis ATCC 23365]
gi|254702977|ref|ZP_05164805.1| DNA protecting protein DprA [Brucella suis bv. 3 str. 686]
gi|260568110|ref|ZP_05838579.1| SMF protein [Brucella suis bv. 4 str. 40]
gi|261753586|ref|ZP_05997295.1| DNA protecting protein DprA [Brucella suis bv. 3 str. 686]
gi|23463962|gb|AAN33791.1| DNA processing protein DprA, putative [Brucella suis 1330]
gi|161337475|gb|ABX63779.1| DNA protecting protein DprA [Brucella canis ATCC 23365]
gi|260154775|gb|EEW89856.1| SMF protein [Brucella suis bv. 4 str. 40]
gi|261743339|gb|EEY31265.1| DNA protecting protein DprA [Brucella suis bv. 3 str. 686]
Length = 393
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|254691038|ref|ZP_05154292.1| SMF protein [Brucella abortus bv. 6 str. 870]
Length = 381
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 166 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 199
>gi|88608661|ref|YP_506277.1| putative DNA processing protein DprA [Neorickettsia sennetsu str.
Miyayama]
gi|88600830|gb|ABD46298.1| putative DNA processing protein DprA [Neorickettsia sennetsu str.
Miyayama]
Length = 378
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YP EN+ L E I + GG+ ++E+PFG
Sbjct: 170 GIDQCYPIENQRLQERIIERGGLVVTEVPFG 200
>gi|254720411|ref|ZP_05182222.1| SMF protein [Brucella sp. 83/13]
gi|265985430|ref|ZP_06098165.1| DNA protecting protein DprA [Brucella sp. 83/13]
gi|306839012|ref|ZP_07471833.1| DNA protecting protein DprA [Brucella sp. NF 2653]
gi|264664022|gb|EEZ34283.1| DNA protecting protein DprA [Brucella sp. 83/13]
gi|306405918|gb|EFM62176.1| DNA protecting protein DprA [Brucella sp. NF 2653]
Length = 393
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|306845936|ref|ZP_07478503.1| DNA protecting protein DprA [Brucella sp. BO1]
gi|306273571|gb|EFM55416.1| DNA protecting protein DprA [Brucella sp. BO1]
Length = 393
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|225849802|ref|YP_002730036.1| protein smf (DNA-processing chain A) [Persephonella marina EX-H1]
gi|225645083|gb|ACO03269.1| protein smf (DNA-processing chain A) [Persephonella marina EX-H1]
Length = 352
Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YPPEN+ L E I +NG + ISE P G
Sbjct: 172 GIDIAYPPENKKLYERIIENGAV-ISEFPMG 201
>gi|237795718|ref|YP_002863270.1| DNA uptake protein [Clostridium botulinum Ba4 str. 657]
gi|229261789|gb|ACQ52822.1| DNA uptake protein [Clostridium botulinum Ba4 str. 657]
Length = 385
Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN L + I +NGG ISE P G
Sbjct: 178 LAHGLDMIYPRENIELSKSILNNGGTLISEYPVG 211
>gi|91977499|ref|YP_570158.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB5]
gi|91683955|gb|ABE40257.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB5]
Length = 422
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL +I + G AISE+P G
Sbjct: 225 LAGGHDKIYPPEHEDLLLDIVEARGAAISEMPLG 258
>gi|91205528|ref|YP_537883.1| putative DNA processing protein DprA [Rickettsia bellii RML369-C]
gi|91069072|gb|ABE04794.1| Putative DNA processing protein DprA [Rickettsia bellii RML369-C]
Length = 225
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L E + + G I I+E+P G
Sbjct: 13 IAGGIDHIYPPENKKLFENLAEEGLI-IAELPVG 45
>gi|157827244|ref|YP_001496308.1| putative DNA processing protein DprA [Rickettsia bellii OSU
85-389]
gi|157802548|gb|ABV79271.1| Putative DNA processing protein DprA [Rickettsia bellii OSU
85-389]
Length = 223
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L E + + G I I+E+P G
Sbjct: 13 IAGGIDHIYPPENKKLFENLAEEGLI-IAELPVG 45
>gi|326410760|gb|ADZ67824.1| DNA protecting protein DprA [Brucella melitensis M28]
gi|326554052|gb|ADZ88691.1| DNA protecting protein DprA [Brucella melitensis M5-90]
Length = 393
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPKNGGALITEMPMG 211
>gi|148256077|ref|YP_001240662.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. BTAi1]
gi|146408250|gb|ABQ36756.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. BTAi1]
Length = 372
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL I + G AISE+P G
Sbjct: 175 LAGGHDRIYPPEHIDLLGAIVERNGAAISEMPLG 208
>gi|315648145|ref|ZP_07901246.1| DNA protecting protein DprA [Paenibacillus vortex V453]
gi|315276791|gb|EFU40134.1| DNA protecting protein DprA [Paenibacillus vortex V453]
Length = 391
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L EEI G+ ISE P G
Sbjct: 190 LGAGIDVIYPPENRSLYEEIAAK-GLVISEYPPG 222
>gi|320108287|ref|YP_004183877.1| DNA protecting protein DprA [Terriglobus saanensis SP1PR4]
gi|319926808|gb|ADV83883.1| DNA protecting protein DprA [Terriglobus saanensis SP1PR4]
Length = 410
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L EEI GG +SE P G
Sbjct: 201 GIDVIYPKENKRLAEEILQGGGAIVSEYPLG 231
>gi|88657722|ref|YP_507678.1| putative DNA processing protein DprA [Ehrlichia chaffeensis str.
Arkansas]
gi|88599179|gb|ABD44648.1| putative DNA processing protein DprA [Ehrlichia chaffeensis str.
Arkansas]
Length = 375
Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MA G++ +YP EN +L I D GG+ I+E PF
Sbjct: 174 MASGVNIVYPQENIHLYNTIVDKGGLIITEFPF 206
>gi|312897996|ref|ZP_07757405.1| DNA protecting protein DprA [Megasphaera micronuciformis F0359]
gi|310620921|gb|EFQ04472.1| DNA protecting protein DprA [Megasphaera micronuciformis F0359]
Length = 367
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YPPEN L I GG+ SE PFG
Sbjct: 177 GAGLDKTYPPENAALFRRIIGAGGVVCSEFPFG 209
>gi|262089745|gb|ACY24839.1| Smf protein [uncultured organism]
Length = 382
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YP +R L ++I D GG +SE+P G
Sbjct: 179 MGTGLDMIYPSRHRALAQQIVDIGGALVSELPLG 212
>gi|255002940|ref|ZP_05277904.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Puerto Rico]
gi|255004065|ref|ZP_05278866.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Virginia]
Length = 354
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP +N +L I NGG+ ++E+PF
Sbjct: 153 ASGIDVVYPKDNLHLYRAIVHNGGVVVTELPF 184
>gi|56416598|ref|YP_153672.1| DNA processing protein, chain A [Anaplasma marginale str. St.
Maries]
gi|222474964|ref|YP_002563379.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Florida]
gi|56387830|gb|AAV86417.1| DNA processing protein, chain A [Anaplasma marginale str. St.
Maries]
gi|222419100|gb|ACM49123.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Florida]
Length = 377
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP +N +L I NGG+ ++E+PF
Sbjct: 176 ASGIDVVYPKDNLHLYRAIVHNGGVVVTELPF 207
>gi|269958987|ref|YP_003328776.1| putativeDNA recombination-mediator protein A [Anaplasma centrale
str. Israel]
gi|269848818|gb|ACZ49462.1| putativeDNA recombination-mediator protein A [Anaplasma centrale
str. Israel]
Length = 378
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP +N +L I NGG+ ++E+PF
Sbjct: 176 ANGIDVVYPKDNLHLYRAIVHNGGVVVTELPF 207
>gi|67458923|ref|YP_246547.1| putative DNA processing protein DprA [Rickettsia felis URRWXCal2]
gi|67004456|gb|AAY61382.1| Putatie DNA processing protein DprA [Rickettsia felis URRWXCal2]
Length = 382
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L E + + G I ++E+P G
Sbjct: 177 IAGGIDHIYPPENKKLFENLAEEGLI-LAELPIG 209
>gi|58616939|ref|YP_196138.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Gardel]
gi|58416551|emb|CAI27664.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Gardel]
Length = 375
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G++ +YP EN L I DNGG+ +E PF
Sbjct: 174 MGNGINIVYPEENTTLYNAITDNGGLIATEFPFA 207
>gi|57238947|ref|YP_180083.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Welgevonden]
gi|58578880|ref|YP_197092.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Welgevonden]
gi|57161026|emb|CAH57932.1| putative DNA processing protein chain A [Ehrlichia ruminantium str.
Welgevonden]
gi|58417506|emb|CAI26710.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Welgevonden]
Length = 375
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G++ +YP EN L I DNGG+ +E PF
Sbjct: 174 MGNGINIVYPEENTTLYNAITDNGGLIATEFPFA 207
>gi|253579631|ref|ZP_04856900.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849132|gb|EES77093.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 305
Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 1 MAGGLDCLYPPENRNLLEEI-WDNGGIAISEIPFG 34
+ G+D YP NR L E I W+NGGI ISE P G
Sbjct: 114 LGSGVDVCYPKSNRKLYERILWENGGI-ISECPLG 147
>gi|299138372|ref|ZP_07031551.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX8]
gi|298599618|gb|EFI55777.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX8]
Length = 403
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L E+I GG ISE P G
Sbjct: 180 GIDVIYPKENKKLAEQIVQQGGALISEFPMG 210
>gi|188996508|ref|YP_001930759.1| DNA protecting protein DprA [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931575|gb|ACD66205.1| DNA protecting protein DprA [Sulfurihydrogenibium sp. YO3AOP1]
Length = 356
Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L EEI + G I ISE PFG
Sbjct: 171 LGNGIDIVYPYENKKLYEEISEKGCI-ISEFPFG 203
>gi|331007628|ref|ZP_08330770.1| Rossmann fold nucleotide-binding protein [gamma proteobacterium
IMCC1989]
gi|330418568|gb|EGG93092.1| Rossmann fold nucleotide-binding protein [gamma proteobacterium
IMCC1989]
Length = 391
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
MA G++ +YP ++NL E+I ++GG+ I+E P
Sbjct: 194 MATGINSVYPKRHQNLAEQIVEDGGVLITEFP 225
>gi|322436363|ref|YP_004218575.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX9]
gi|321164090|gb|ADW69795.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX9]
Length = 404
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN+ L EEI GG +SE P G
Sbjct: 187 GLDVVYPKENKRLAEEIVTGGGAIVSEYPLG 217
>gi|90417726|ref|ZP_01225638.1| DNA processing protein DprA, putative [Aurantimonas manganoxydans
SI85-9A1]
gi|90337398|gb|EAS51049.1| DNA processing protein DprA, putative [Aurantimonas manganoxydans
SI85-9A1]
Length = 376
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGLD YP ENR L+ I D GG +SE FG
Sbjct: 177 AGGLDRPYPDENRPLMRRIVDEGGCLLSERAFG 209
>gi|169830783|ref|YP_001716765.1| DNA protecting protein DprA [Candidatus Desulforudis audaxviator
MP104C]
gi|169637627|gb|ACA59133.1| DNA protecting protein DprA [Candidatus Desulforudis audaxviator
MP104C]
Length = 394
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN L+E+I +GG+ ++E P G
Sbjct: 195 LGSGLDVVYPRENAGLMEKIAASGGLVLTEFPLG 228
>gi|146341416|ref|YP_001206464.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. ORS278]
gi|146194222|emb|CAL78244.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. ORS278]
Length = 371
Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL I + G AISE+P G
Sbjct: 174 LAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLG 207
>gi|237755691|ref|ZP_04584300.1| DNA protecting protein DprA [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692141|gb|EEP61140.1| DNA protecting protein DprA [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 356
Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L EEI + G I ISE PFG
Sbjct: 171 LGNGIDIVYPYENKKLYEEISEKGCI-ISEFPFG 203
>gi|153005554|ref|YP_001379879.1| DNA protecting protein DprA [Anaeromyxobacter sp. Fw109-5]
gi|152029127|gb|ABS26895.1| DNA protecting protein DprA [Anaeromyxobacter sp. Fw109-5]
Length = 287
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D LYP NR LLE + + GG +SE+P G
Sbjct: 97 LGTGVDVLYPASNRALLERVLEQGGAILSELPDG 130
>gi|114763467|ref|ZP_01442874.1| DNA processing protein DprA, putative [Pelagibaca bermudensis
HTCC2601]
gi|114544005|gb|EAU47016.1| DNA processing protein DprA, putative [Roseovarius sp. HTCC2601]
Length = 375
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D LYP EN L EEI GG +SE G
Sbjct: 153 MAGGVDILYPSENTRLGEEIRARGGALVSEHAMG 186
>gi|241667272|ref|ZP_04754850.1| DNA processing protein DprA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875823|ref|ZP_05248533.1| DNA processing protein dprA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841844|gb|EET20258.1| DNA processing protein dprA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 366
Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L I N G+ ISE+P G
Sbjct: 175 GVDIIYPSSNRELYSNIISNNGLIISELPLG 205
>gi|167626698|ref|YP_001677198.1| DNA processing protein DprA [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596699|gb|ABZ86697.1| DNA processing protein DprA [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 288
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L I N G+ ISE+P G
Sbjct: 97 GVDIIYPSSNRELYSNIISNNGLIISELPLG 127
>gi|329929328|ref|ZP_08283081.1| DNA protecting protein DprA [Paenibacillus sp. HGF5]
gi|328936697|gb|EGG33140.1| DNA protecting protein DprA [Paenibacillus sp. HGF5]
Length = 391
Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L EEI G I ISE P G
Sbjct: 190 LGAGIDVIYPPENRSLYEEIAAKGLI-ISEYPPG 222
>gi|256832232|ref|YP_003160959.1| DNA protecting protein DprA [Jonesia denitrificans DSM 20603]
gi|256685763|gb|ACV08656.1| DNA protecting protein DprA [Jonesia denitrificans DSM 20603]
Length = 395
Score = 37.4 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP N+ LL+ + D+G + +SE+P G
Sbjct: 163 LAGGVDRLYPQGNKKLLQRLIDHGAL-VSEMPVG 195
>gi|261407992|ref|YP_003244233.1| DNA protecting protein DprA [Paenibacillus sp. Y412MC10]
gi|261284455|gb|ACX66426.1| DNA protecting protein DprA [Paenibacillus sp. Y412MC10]
Length = 391
Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L EEI G I ISE P G
Sbjct: 190 LGAGIDVIYPPENRSLYEEIAAKGLI-ISEYPPG 222
>gi|150005910|ref|YP_001300654.1| putative DNA processing enzyme DprA [Bacteroides vulgatus ATCC
8482]
gi|149934334|gb|ABR41032.1| putative DNA processing enzyme DprA [Bacteroides vulgatus ATCC
8482]
Length = 326
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 1 MAGGLD--CLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN +L +EI NGG+ +SE P G
Sbjct: 180 LANGLDWASIYPKENLSLAKEIVSNGGLLLSEYPVG 215
>gi|83309780|ref|YP_420044.1| Rossmann fold nucleotide-binding protein [Magnetospirillum
magneticum AMB-1]
gi|82944621|dbj|BAE49485.1| Predicted Rossmann fold nucleotide-binding protein
[Magnetospirillum magneticum AMB-1]
Length = 383
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN +L EI G + +SE+P G
Sbjct: 181 LAGGVDVVYPPENTDLWREIGAAGAV-VSEMPVG 213
>gi|325297496|ref|YP_004257413.1| SMF family protein [Bacteroides salanitronis DSM 18170]
gi|324317049|gb|ADY34940.1| SMF family protein [Bacteroides salanitronis DSM 18170]
Length = 343
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +P N+ L EEI GG +SE PFG
Sbjct: 199 VASGLDITHPKVNKTLQEEIVAKGGTIVSEHPFG 232
>gi|260752380|ref|YP_003225273.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258551743|gb|ACV74689.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 385
Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+AGGLD YPPEN+ L + I + G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAISEK-GLVVSEMP 203
>gi|56750836|ref|YP_171537.1| DNA processing protein [Synechococcus elongatus PCC 6301]
gi|56685795|dbj|BAD79017.1| DNA processing protein [Synechococcus elongatus PCC 6301]
Length = 406
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G++ +YPP+NR L E I + GG+ +SE P G
Sbjct: 204 LGTGVNVIYPPQNRALYEAILEQGGLILSEQPSG 237
>gi|81299514|ref|YP_399722.1| DNA processing protein DprA, putative [Synechococcus elongatus PCC
7942]
gi|81168395|gb|ABB56735.1| DNA processing protein DprA, putative [Synechococcus elongatus PCC
7942]
Length = 402
Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G++ +YPP+NR L E I + GG+ +SE P G
Sbjct: 200 LGTGVNVIYPPQNRALYEAILEQGGLILSEQPSG 233
>gi|292670827|ref|ZP_06604253.1| DNA protecting protein DprA [Selenomonas noxia ATCC 43541]
gi|292647448|gb|EFF65420.1| DNA protecting protein DprA [Selenomonas noxia ATCC 43541]
Length = 363
Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISE 30
G+D YPPENR LL +I ++GG +SE
Sbjct: 175 GVDIAYPPENRRLLSQIVESGGAVLSE 201
>gi|89895301|ref|YP_518788.1| hypothetical protein DSY2555 [Desulfitobacterium hafniense Y51]
gi|219669735|ref|YP_002460170.1| DNA protecting protein DprA [Desulfitobacterium hafniense DCB-2]
gi|89334749|dbj|BAE84344.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539995|gb|ACL21734.1| DNA protecting protein DprA [Desulfitobacterium hafniense DCB-2]
Length = 389
Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GL+ +YPPEN+ L EEI GG SE P G
Sbjct: 182 MGCGLNHMYPPENQKLAEEILAKGGALWSEFPPG 215
>gi|56552090|ref|YP_162929.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543664|gb|AAV89818.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ZM4]
Length = 385
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+AGGLD YPPEN+ L + I + G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAISEK-GLVVSEMP 203
>gi|241762041|ref|ZP_04760125.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373507|gb|EER63094.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 385
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+AGGLD YPPEN+ L + I + G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAISEK-GLVVSEMP 203
>gi|4511994|gb|AAD21554.1| DNA processing chain A [Zymomonas mobilis subsp. mobilis ZM4]
Length = 385
Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+AGGLD YPPEN+ L + I + G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAISEK-GLVVSEMP 203
>gi|148558431|ref|YP_001257589.1| SMF protein [Brucella ovis ATCC 25840]
gi|148369716|gb|ABQ62588.1| SMF protein [Brucella ovis ATCC 25840]
Length = 393
Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AG LD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGRLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|238019258|ref|ZP_04599684.1| hypothetical protein VEIDISOL_01122 [Veillonella dispar ATCC 17748]
gi|237863957|gb|EEP65247.1| hypothetical protein VEIDISOL_01122 [Veillonella dispar ATCC 17748]
Length = 408
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YP EN L + I N G+ +SE P G
Sbjct: 179 MGCGLDIVYPRENTKLFDRILQNNGLLVSEYPPG 212
>gi|313892558|ref|ZP_07826145.1| DNA protecting protein DprA [Dialister microaerophilus UPII 345-E]
gi|313118955|gb|EFR42160.1| DNA protecting protein DprA [Dialister microaerophilus UPII 345-E]
Length = 363
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A GLD YP ENRNL E+I +GG ISE
Sbjct: 170 ACGLDKTYPAENRNLFEKIIAHGGCIISE 198
>gi|68536255|ref|YP_250960.1| putative DNA processing protein [Corynebacterium jeikeium K411]
gi|260578955|ref|ZP_05846858.1| DNA processing protein [Corynebacterium jeikeium ATCC 43734]
gi|68263854|emb|CAI37342.1| putative DNA processing protein [Corynebacterium jeikeium K411]
gi|258602929|gb|EEW16203.1| DNA processing protein [Corynebacterium jeikeium ATCC 43734]
Length = 396
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA GLD YP + NL E+I +GG+ ISE P G
Sbjct: 198 MACGLDVSYPKAHANLFEQIVGSGGMLISEYPPG 231
>gi|329121225|ref|ZP_08249852.1| DNA processing protein DprA [Dialister micraerophilus DSM 19965]
gi|327470159|gb|EGF15622.1| DNA processing protein DprA [Dialister micraerophilus DSM 19965]
Length = 363
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A GLD YP ENRNL E+I +GG ISE
Sbjct: 170 ACGLDKTYPAENRNLFEKIIAHGGCIISE 198
>gi|85859218|ref|YP_461420.1| SMF family protein involved in DNA uptake [Syntrophus
aciditrophicus SB]
gi|85722309|gb|ABC77252.1| SMF family protein involved in DNA uptake [Syntrophus
aciditrophicus SB]
Length = 394
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPPEN+NL E+I +G + ISE+ G
Sbjct: 176 GLDIVYPPENKNLYEKIAADGAV-ISELALG 205
>gi|225874954|ref|YP_002756413.1| DNA protecting protein DprA [Acidobacterium capsulatum ATCC 51196]
gi|225792046|gb|ACO32136.1| DNA protecting protein DprA [Acidobacterium capsulatum ATCC 51196]
Length = 401
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L E+I GG +SE+P G
Sbjct: 192 GVDVIYPKENKALAEQIVATGGAIVSELPLG 222
>gi|46200754|ref|ZP_00056433.2| COG0758: Predicted Rossmann fold nucleotide-binding protein
involved in DNA uptake [Magnetospirillum magnetotacticum
MS-1]
Length = 383
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN +L EI G +SE+P G
Sbjct: 181 LAGGVDVVYPPENTDLWREIC-AAGTVVSEMPVG 213
>gi|88606798|ref|YP_505506.1| putative DNA processing protein DprA [Anaplasma phagocytophilum HZ]
gi|88597861|gb|ABD43331.1| putative DNA processing protein DprA [Anaplasma phagocytophilum HZ]
Length = 344
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+A G++ +YP EN L + I GG+ ISE+PF
Sbjct: 143 IANGINVIYPRENAKLYKSIVREGGLLISELPF 175
>gi|291533226|emb|CBL06339.1| DNA protecting protein DprA [Megamonas hypermegale ART12/1]
Length = 368
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
GLD +YP EN+ LLE I NG + ISE P
Sbjct: 172 GLDIIYPKENKQLLEAIAQNGAV-ISEYPL 200
>gi|325294278|ref|YP_004280792.1| DNA protecting protein DprA [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325064726|gb|ADY72733.1| DNA protecting protein DprA [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 337
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N +L E I D GG ISE P G
Sbjct: 154 LGSGVDSIYPRGNFSLAERIVDTGGAIISEFPLG 187
>gi|313892683|ref|ZP_07826266.1| DNA protecting protein DprA [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442774|gb|EFR61183.1| DNA protecting protein DprA [Veillonella sp. oral taxon 158 str.
F0412]
Length = 408
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YP EN L + I N G+ +SE P G
Sbjct: 179 MGCGLDIVYPRENTKLFDRILQNNGLLLSEYPPG 212
>gi|254294345|ref|YP_003060368.1| DNA protecting protein DprA [Hirschia baltica ATCC 49814]
gi|254042876|gb|ACT59671.1| DNA protecting protein DprA [Hirschia baltica ATCC 49814]
Length = 373
Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPE+ L + I + G I +SE P G
Sbjct: 175 LAGGVDAIYPPEHAKLYDAILERGAI-VSESPLG 207
>gi|222054654|ref|YP_002537016.1| DNA protecting protein DprA [Geobacter sp. FRC-32]
gi|221563943|gb|ACM19915.1| DNA protecting protein DprA [Geobacter sp. FRC-32]
Length = 359
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPENR L +E+ + G + +SE P G
Sbjct: 173 GIDIVYPPENRPLFKEMEEKGAL-VSEFPMG 202
>gi|313895732|ref|ZP_07829288.1| DNA protecting protein DprA [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320528987|ref|ZP_08030079.1| DNA protecting protein DprA [Selenomonas artemidis F0399]
gi|312975858|gb|EFR41317.1| DNA protecting protein DprA [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320138617|gb|EFW30507.1| DNA protecting protein DprA [Selenomonas artemidis F0399]
Length = 363
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISE 30
G+D YPPENR L+ +I D GG +SE
Sbjct: 175 GVDIAYPPENRRLIAQIIDAGGAVLSE 201
>gi|225163857|ref|ZP_03726152.1| DNA protecting protein DprA [Opitutaceae bacterium TAV2]
gi|224801538|gb|EEG19839.1| DNA protecting protein DprA [Opitutaceae bacterium TAV2]
Length = 388
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D +YPPEN +L I + GG SE PF
Sbjct: 173 LGTGIDIIYPPENLDLYRRIENEGGAICSEFPF 205
>gi|39997645|ref|NP_953596.1| DNA processing protein DprA [Geobacter sulfurreducens PCA]
gi|39984537|gb|AAR35923.1| DNA processing protein DprA [Geobacter sulfurreducens PCA]
gi|298506585|gb|ADI85308.1| DNA uptake/processing protein SMF [Geobacter sulfurreducens KN400]
Length = 356
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPENR L + D G + +SE P G
Sbjct: 171 GIDVVYPPENRALFARVADRGAL-VSEFPLG 200
>gi|187734950|ref|YP_001877062.1| DNA protecting protein DprA [Akkermansia muciniphila ATCC BAA-835]
gi|187425002|gb|ACD04281.1| DNA protecting protein DprA [Akkermansia muciniphila ATCC BAA-835]
Length = 375
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ENRNL + I D G +SE P
Sbjct: 173 IGAGLNKLYPRENRNLAQRIADGHGAVVSEFPM 205
>gi|84501686|ref|ZP_00999858.1| DNA processing protein DprA, putative [Oceanicola batsensis
HTCC2597]
gi|84390307|gb|EAQ02866.1| DNA processing protein DprA, putative [Oceanicola batsensis
HTCC2597]
Length = 372
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D LYPPEN L + I G +SE+P G
Sbjct: 153 MAGGVDALYPPENATLADAI-PGTGARLSEMPMG 185
>gi|269836418|ref|YP_003318646.1| DNA protecting protein DprA [Sphaerobacter thermophilus DSM 20745]
gi|269785681|gb|ACZ37824.1| DNA protecting protein DprA [Sphaerobacter thermophilus DSM 20745]
Length = 359
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPE+R L E++ G + +SE P G
Sbjct: 171 LGSGVDVIYPPEHRQLAEQVAQQGAL-VSEFPLG 203
>gi|192291901|ref|YP_001992506.1| DNA protecting protein DprA [Rhodopseudomonas palustris TIE-1]
gi|192285650|gb|ACF02031.1| DNA protecting protein DprA [Rhodopseudomonas palustris TIE-1]
Length = 378
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I G AISE+P G
Sbjct: 181 LAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLG 214
>gi|208780407|ref|ZP_03247748.1| DNA protecting protein DprA, putative [Francisella novicida FTG]
gi|208743775|gb|EDZ90078.1| DNA protecting protein DprA, putative [Francisella novicida FTG]
Length = 368
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE+P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISELPLG 207
>gi|148265710|ref|YP_001232416.1| DNA protecting protein DprA [Geobacter uraniireducens Rf4]
gi|146399210|gb|ABQ27843.1| DNA protecting protein DprA [Geobacter uraniireducens Rf4]
Length = 359
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPEN+ L +E+ + G + +SE P G
Sbjct: 173 GIDVVYPPENQRLFKEMAEKGAL-VSEFPMG 202
>gi|157413603|ref|YP_001484469.1| DNA uptake Rossmann fold nucleotide-binding protein
[Prochlorococcus marinus str. MIT 9215]
gi|157388178|gb|ABV50883.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Prochlorococcus marinus str. MIT 9215]
Length = 311
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN NL EI D GG +SE G
Sbjct: 169 LPNGLDEIYPKENANLASEIIDYGGCLVSEYLIG 202
>gi|39936183|ref|NP_948459.1| DNA processing protein DprA [Rhodopseudomonas palustris CGA009]
gi|39650038|emb|CAE28561.1| DNA processing chain A [Rhodopseudomonas palustris CGA009]
Length = 380
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I G AISE+P G
Sbjct: 183 LAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLG 216
>gi|110633709|ref|YP_673917.1| DNA protecting protein DprA [Mesorhizobium sp. BNC1]
gi|110284693|gb|ABG62752.1| DNA protecting protein DprA [Chelativorans sp. BNC1]
Length = 378
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I + G+ ++E+PFG
Sbjct: 176 LAGGLDRPYPPENDGLFRAIGER-GVVLTEMPFG 208
>gi|255659254|ref|ZP_05404663.1| DNA processing protein DprA [Mitsuokella multacida DSM 20544]
gi|260848709|gb|EEX68716.1| DNA processing protein DprA [Mitsuokella multacida DSM 20544]
Length = 365
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISE 30
G+D YP ENR LL EI ++GG ISE
Sbjct: 177 GIDVAYPAENRRLLMEIAESGGAVISE 203
>gi|144898216|emb|CAM75080.1| DNA processing chain A [Magnetospirillum gryphiswaldense MSR-1]
Length = 377
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L ++I G A+SE+P G
Sbjct: 173 LAGGVDVVYPPENQRLYDDIVAM-GCAVSEMPPG 205
>gi|77918023|ref|YP_355838.1| Rossmann-fold nucleotide-binding protein [Pelobacter carbinolicus
DSM 2380]
gi|77544106|gb|ABA87668.1| DNA protecting protein DprA [Pelobacter carbinolicus DSM 2380]
Length = 366
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L +I D GG +SE P G
Sbjct: 174 GIDRIYPAENKQLFNDILDQGGAILSEYPPG 204
>gi|118578968|ref|YP_900218.1| DNA protecting protein DprA [Pelobacter propionicus DSM 2379]
gi|118501678|gb|ABK98160.1| DNA protecting protein DprA [Pelobacter propionicus DSM 2379]
Length = 371
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPENR+L +E+ + G + +SE P G
Sbjct: 180 GIDRIYPPENRDLFDEMAERGCL-VSEFPLG 209
>gi|302392405|ref|YP_003828225.1| DNA protecting protein DprA [Acetohalobium arabaticum DSM 5501]
gi|302204482|gb|ADL13160.1| DNA protecting protein DprA [Acetohalobium arabaticum DSM 5501]
Length = 367
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN L+ EI ++G + IS P G
Sbjct: 171 LGSGIDVIYPPENDELVTEIEESGAV-ISSFPLG 203
>gi|225848022|ref|YP_002728185.1| DNA protecting protein DprA [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643199|gb|ACN98249.1| DNA protecting protein DprA [Sulfurihydrogenibium azorense Az-Fu1]
Length = 356
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ENR L ++I +NG + ISE P G
Sbjct: 171 LGSGIDVVYPFENRKLYDKITENGCV-ISEFPIG 203
>gi|86749541|ref|YP_486037.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
HaA2]
gi|86572569|gb|ABD07126.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
HaA2]
Length = 378
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I + G AISE+P G
Sbjct: 181 LAGGHDKIYPAEHEDLLLDIIEARGAAISEMPLG 214
>gi|316933647|ref|YP_004108629.1| DNA protecting protein DprA [Rhodopseudomonas palustris DX-1]
gi|315601361|gb|ADU43896.1| DNA protecting protein DprA [Rhodopseudomonas palustris DX-1]
Length = 378
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I + G AISE+P G
Sbjct: 181 LAGGHDKIYPAEHEDLLLDIVQSRGAAISEMPLG 214
>gi|209884919|ref|YP_002288776.1| SMF protein [Oligotropha carboxidovorans OM5]
gi|209873115|gb|ACI92911.1| SMF protein [Oligotropha carboxidovorans OM5]
Length = 377
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL+ I G AISE+ G
Sbjct: 176 LAGGHDRIYPPEHESLLDAILAANGGAISEMQLG 209
>gi|308177311|ref|YP_003916717.1| smf family protein [Arthrobacter arilaitensis Re117]
gi|307744774|emb|CBT75746.1| putative smf family protein [Arthrobacter arilaitensis Re117]
Length = 414
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D LYP N NLL +I G+ +SE+P G
Sbjct: 216 MAGGIDRLYPSGNSNLLNQIVAR-GVLLSEVPPG 248
>gi|255689876|ref|ZP_05413551.1| putative DNA processing protein DprA [Bacteroides finegoldii DSM
17565]
gi|260624481|gb|EEX47352.1| putative DNA processing protein DprA [Bacteroides finegoldii DSM
17565]
Length = 309
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +P N++L +EI GG +SE PFG
Sbjct: 178 VASGLDITHPKVNKSLQDEIIAKGGTILSEHPFG 211
>gi|91763089|ref|ZP_01265053.1| DNA processing chain A [Candidatus Pelagibacter ubique HTCC1002]
gi|91717502|gb|EAS84153.1| DNA processing chain A [Candidatus Pelagibacter ubique HTCC1002]
Length = 306
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP ENR L + I N GI ++E FG
Sbjct: 190 LANGLDTIYPSENRELAKNIL-NKGILLTEYTFG 222
>gi|251772341|gb|EES52909.1| putative DNA processing protein DprA [Leptospirillum
ferrodiazotrophum]
Length = 292
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPPEN L EI GG+ +SE P G
Sbjct: 177 GLDRVYPPENVGLAREIERTGGLILSEYPPG 207
>gi|253700153|ref|YP_003021342.1| DNA protecting protein DprA [Geobacter sp. M21]
gi|251775003|gb|ACT17584.1| DNA protecting protein DprA [Geobacter sp. M21]
Length = 359
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPEN L + + DNG + ISE P G
Sbjct: 173 GIDLVYPPENGALYQALADNGAL-ISEFPMG 202
>gi|296117478|ref|ZP_06836065.1| putative DNA processing chain A [Gluconacetobacter hansenii ATCC
23769]
gi|295975999|gb|EFG82790.1| putative DNA processing chain A [Gluconacetobacter hansenii ATCC
23769]
Length = 375
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPE+ L +EI G + I+E P G
Sbjct: 164 IAGGLDCPYPPEHGRLHDEIAQQGAL-ITEAPPG 196
>gi|317063578|ref|ZP_07928063.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689254|gb|EFS26089.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 355
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP ENR L E+I + G+ ISE P G
Sbjct: 169 VGSGLDIIYPKENRILWEQI-ERSGLIISEYPLG 201
>gi|257469331|ref|ZP_05633425.1| Smf protein [Fusobacterium ulcerans ATCC 49185]
Length = 352
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP ENR L E+I + G+ ISE P G
Sbjct: 166 VGSGLDIIYPKENRILWEQI-ERSGLIISEYPLG 198
>gi|326204632|ref|ZP_08194488.1| DNA protecting protein DprA [Clostridium papyrosolvens DSM 2782]
gi|325985199|gb|EGD46039.1| DNA protecting protein DprA [Clostridium papyrosolvens DSM 2782]
Length = 374
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN L +EI D+ G+ +SE P G
Sbjct: 171 LGSGLDNIYPQENAGLFKEIIDSKGLVLSEYPPG 204
>gi|328676429|gb|AEB27299.1| Rossmann fold nucleotide-binding protein Smf possibly involved in
DNA uptake [Francisella cf. novicida Fx1]
Length = 368
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|254372325|ref|ZP_04987816.1| DNA uptake protein [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570054|gb|EDN35708.1| DNA uptake protein [Francisella novicida GA99-3549]
Length = 368
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|167009201|ref|ZP_02274132.1| DNA processing protein DprA [Francisella tularensis subsp.
holarctica FSC200]
gi|254367122|ref|ZP_04983155.1| DNA uptake protein, SMF family [Francisella tularensis subsp.
holarctica 257]
gi|134252945|gb|EBA52039.1| DNA uptake protein, SMF family [Francisella tularensis subsp.
holarctica 257]
Length = 245
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 77 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 107
>gi|134302268|ref|YP_001122237.1| DNA processing protein DprA [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050045|gb|ABO47116.1| DNA processing protein DprA [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 368
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|25028474|ref|NP_738528.1| putative DNA processing protein [Corynebacterium efficiens YS-314]
gi|259507533|ref|ZP_05750433.1| Rossmann-fold nucleotide-binding protein [Corynebacterium efficiens
YS-314]
gi|23493759|dbj|BAC18728.1| putative DNA processing protein [Corynebacterium efficiens YS-314]
gi|259164918|gb|EEW49472.1| Rossmann-fold nucleotide-binding protein [Corynebacterium efficiens
YS-314]
Length = 403
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP NR L EE+ + GG ++E P G
Sbjct: 194 ACGLDRSYPAHNRGLFEEVVNRGGAIVTEYPPG 226
>gi|290954217|ref|ZP_06558838.1| DNA processing protein DprA [Francisella tularensis subsp.
holarctica URFT1]
gi|295312381|ref|ZP_06803163.1| DNA processing protein DprA [Francisella tularensis subsp.
holarctica URFT1]
Length = 268
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 77 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 107
>gi|118496955|ref|YP_898005.1| SMF family DNA uptake protein [Francisella tularensis subsp.
novicida U112]
gi|194324184|ref|ZP_03057958.1| DNA protecting protein DprA, putative [Francisella tularensis
subsp. novicida FTE]
gi|118422861|gb|ABK89251.1| DNA uptake protein, SMF family [Francisella novicida U112]
gi|194321631|gb|EDX19115.1| DNA protecting protein DprA, putative [Francisella tularensis
subsp. novicida FTE]
Length = 368
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|294791910|ref|ZP_06757058.1| DNA processing protein DprA [Veillonella sp. 6_1_27]
gi|294457140|gb|EFG25502.1| DNA processing protein DprA [Veillonella sp. 6_1_27]
Length = 408
Score = 35.4 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP EN L + I N G+ +SE P G
Sbjct: 179 MGCGLDITYPRENAKLFDRILQNNGLLLSEYPPG 212
>gi|110832994|ref|YP_691853.1| peptide deformylase, DNA processing protein [Alcanivorax
borkumensis SK2]
gi|110646105|emb|CAL15581.1| peptide deformylase, DNA processing protein [Alcanivorax
borkumensis SK2]
Length = 353
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G D +YPP N +L EEI D GG +SE G
Sbjct: 165 MGNGPDRIYPPRNGSLAEEIVDTGGALVSEFAPG 198
>gi|269795658|ref|YP_003315113.1| DNA protecting protein DprA [Sanguibacter keddieii DSM 10542]
gi|269097843|gb|ACZ22279.1| DNA protecting protein DprA [Sanguibacter keddieii DSM 10542]
Length = 399
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D LYP N +LL + D G+ +SE+P G
Sbjct: 192 LAGGPDRLYPAGNADLLRGVLDGAGLVLSELPPG 225
>gi|332670025|ref|YP_004453033.1| SMF family protein [Cellulomonas fimi ATCC 484]
gi|332339063|gb|AEE45646.1| SMF family protein [Cellulomonas fimi ATCC 484]
Length = 412
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP N ++ + D+GG +SE+P G
Sbjct: 190 LAGGVDRAYPVGNARMIAAVMDDGGTVVSEVPVG 223
>gi|90019672|ref|YP_525499.1| filamentous hemagglutinin-like protein [Saccharophagus degradans
2-40]
gi|89949272|gb|ABD79287.1| DNA processing protein DprA, putative [Saccharophagus degradans
2-40]
Length = 399
Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N L EI NGG +SE P G
Sbjct: 200 GIDSVYPQRNSALASEIIANGGAIVSEFPLG 230
>gi|164687263|ref|ZP_02211291.1| hypothetical protein CLOBAR_00904 [Clostridium bartlettii DSM
16795]
gi|164603687|gb|EDQ97152.1| hypothetical protein CLOBAR_00904 [Clostridium bartlettii DSM
16795]
Length = 304
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YPPEN +L +EI +N G ISE G
Sbjct: 178 GLDKYYPPENCDLGDEILENEGCLISEYKIG 208
>gi|254370428|ref|ZP_04986433.1| predicted protein [Francisella tularensis subsp. tularensis FSC033]
gi|151568671|gb|EDN34325.1| predicted protein [Francisella tularensis subsp. tularensis FSC033]
Length = 228
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|254446574|ref|ZP_05060050.1| DNA protecting protein DprA, putative [Verrucomicrobiae bacterium
DG1235]
gi|198260882|gb|EDY85190.1| DNA protecting protein DprA, putative [Verrucomicrobiae bacterium
DG1235]
Length = 376
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPEN +L + NG + +SE PFG
Sbjct: 180 GIDIVYPPENVDLFRQAQVNGAV-VSEFPFG 209
>gi|254373799|ref|ZP_04989282.1| DNA processing protein DprA [Francisella novicida GA99-3548]
gi|151571520|gb|EDN37174.1| DNA processing protein DprA [Francisella novicida GA99-3548]
Length = 368
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|85716403|ref|ZP_01047375.1| SMF protein [Nitrobacter sp. Nb-311A]
gi|85696760|gb|EAQ34646.1| SMF protein [Nitrobacter sp. Nb-311A]
Length = 372
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL + ++GG AISE+P G
Sbjct: 175 LAGGHDRIYPLEHEDLLAAVLEDGG-AISEMPMG 207
>gi|75676200|ref|YP_318621.1| SMF protein [Nitrobacter winogradskyi Nb-255]
gi|74421070|gb|ABA05269.1| SMF protein [Nitrobacter winogradskyi Nb-255]
Length = 372
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL + ++GG AISE+P G
Sbjct: 175 LAGGHDRIYPLEHEDLLAAVLESGG-AISEMPMG 207
>gi|328954307|ref|YP_004371641.1| DNA protecting protein DprA [Desulfobacca acetoxidans DSM 11109]
gi|328454631|gb|AEB10460.1| DNA protecting protein DprA [Desulfobacca acetoxidans DSM 11109]
Length = 366
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN+ L ++I +NG + +SE P G
Sbjct: 178 GLDVIYPQENKALYQQISENGAL-VSEFPLG 207
>gi|206890890|ref|YP_002248891.1| DNA processing protein DprA [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742828|gb|ACI21885.1| DNA processing protein DprA [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 368
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G+ C+YPPEN+ L E+I NG I ISE
Sbjct: 174 LGSGVSCIYPPENKMLAEKIIKNGAI-ISE 202
>gi|294055361|ref|YP_003549019.1| DNA protecting protein DprA [Coraliomargarita akajimensis DSM
45221]
gi|293614694|gb|ADE54849.1| DNA protecting protein DprA [Coraliomargarita akajimensis DSM
45221]
Length = 373
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPPEN +L I G + +SE PFG
Sbjct: 179 GLDIVYPPENLDLYRAIVAKGAV-VSEFPFG 208
>gi|189426316|ref|YP_001953493.1| DNA protecting protein DprA [Geobacter lovleyi SZ]
gi|189422575|gb|ACD96973.1| DNA protecting protein DprA [Geobacter lovleyi SZ]
Length = 364
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIP 32
G+D YPPENR L E+I NG I ISE P
Sbjct: 173 GVDVDYPPENRQLAEQISGNGCI-ISEFP 200
>gi|295982522|pdb|3MAJ|A Chain A, Crystal Structure Of Putative Dna Processing Protein Dpra
Fr Rhodopseudomonas Palustris Cga009
Length = 382
Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I G AISE P G
Sbjct: 185 LAGGHDKIYPAEHEDLLLDIIQTRGAAISEXPLG 218
>gi|94266973|ref|ZP_01290622.1| SMF protein [delta proteobacterium MLMS-1]
gi|93452328|gb|EAT02959.1| SMF protein [delta proteobacterium MLMS-1]
Length = 381
Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPP+NR L I G+ + E P G
Sbjct: 179 GLDVVYPPQNRQLFHTIGRQRGLLLGEYPLG 209
>gi|225175754|ref|ZP_03729747.1| DNA protecting protein DprA [Dethiobacter alkaliphilus AHT 1]
gi|225168678|gb|EEG77479.1| DNA protecting protein DprA [Dethiobacter alkaliphilus AHT 1]
Length = 361
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD YPPE+ L+E I +NG + ISE P G
Sbjct: 162 LGHGLDLCYPPEHLELMEAIVENGAV-ISEYPPG 194
>gi|126729116|ref|ZP_01744930.1| DNA processing protein DprA, putative [Sagittula stellata E-37]
gi|126710106|gb|EBA09158.1| DNA processing protein DprA, putative [Sagittula stellata E-37]
Length = 372
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP EN L ++I G ISE P G
Sbjct: 159 LAGGVDVLYPAENAGLADDIVTCHGARISEQPMG 192
>gi|240140065|ref|YP_002964542.1| DNA protecting protein DprA [Methylobacterium extorquens AM1]
gi|240010039|gb|ACS41265.1| DNA protecting protein DprA [Methylobacterium extorquens AM1]
Length = 397
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDRIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|260599605|ref|YP_003212176.1| hypothetical protein CTU_38130 [Cronobacter turicensis z3032]
gi|260218782|emb|CBA34130.1| Protein smf [Cronobacter turicensis z3032]
Length = 381
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP +R L EEI + GG +SE PF
Sbjct: 178 LGNGLAQVYPARHRKLAEEIIEQGGAVVSEFPF 210
>gi|296129327|ref|YP_003636577.1| DNA protecting protein DprA [Cellulomonas flavigena DSM 20109]
gi|296021142|gb|ADG74378.1| DNA protecting protein DprA [Cellulomonas flavigena DSM 20109]
Length = 402
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP N LLEE+ GG SE+P G
Sbjct: 203 LAGGVDRAYPAGNARLLEEVVRAGGSLFSEVPPG 236
>gi|94263095|ref|ZP_01286914.1| SMF protein [delta proteobacterium MLMS-1]
gi|93456638|gb|EAT06746.1| SMF protein [delta proteobacterium MLMS-1]
Length = 381
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPP+NR L I G+ + E P G
Sbjct: 179 GLDVVYPPQNRQLFHTIGRQRGLLLGEYPLG 209
>gi|220923237|ref|YP_002498539.1| DNA protecting protein DprA [Methylobacterium nodulans ORS 2060]
gi|219947844|gb|ACL58236.1| DNA protecting protein DprA [Methylobacterium nodulans ORS 2060]
Length = 391
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ L I D+GG ++E+P G
Sbjct: 166 LAGGHDRIYPAEHEPLAARILDHGGAIVAEMPLG 199
>gi|253583758|ref|ZP_04860956.1| smf protein [Fusobacterium varium ATCC 27725]
gi|251834330|gb|EES62893.1| smf protein [Fusobacterium varium ATCC 27725]
Length = 352
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP ENR L E I + G+ ISE P G
Sbjct: 166 VGSGLDVIYPKENRILWENI-EKSGLIISEYPLG 198
>gi|330994161|ref|ZP_08318089.1| Protein smf [Gluconacetobacter sp. SXCC-1]
gi|329758628|gb|EGG75144.1| Protein smf [Gluconacetobacter sp. SXCC-1]
Length = 390
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPE+ +L I G + ++E P G
Sbjct: 168 IAGGLDCPYPPEHADLQARIAGTGAV-VTEAPLG 200
>gi|254562490|ref|YP_003069585.1| DNA protecting protein DprA [Methylobacterium extorquens DM4]
gi|254269768|emb|CAX25740.1| DNA protecting protein DprA [Methylobacterium extorquens DM4]
Length = 397
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDQIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|218531570|ref|YP_002422386.1| DNA protecting protein DprA [Methylobacterium chloromethanicum CM4]
gi|218523873|gb|ACK84458.1| DNA protecting protein DprA [Methylobacterium chloromethanicum CM4]
Length = 397
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDRIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|163852730|ref|YP_001640773.1| DNA protecting protein DprA [Methylobacterium extorquens PA1]
gi|163664335|gb|ABY31702.1| DNA protecting protein DprA [Methylobacterium extorquens PA1]
Length = 397
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDRIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|238926948|ref|ZP_04658708.1| SMF family DNA processing protein [Selenomonas flueggei ATCC 43531]
gi|238885182|gb|EEQ48820.1| SMF family DNA processing protein [Selenomonas flueggei ATCC 43531]
Length = 369
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISE 30
G+D YP ENR LL EI +GG +SE
Sbjct: 181 GVDVAYPSENRRLLAEICTSGGAVLSE 207
>gi|16329968|ref|NP_440696.1| hypothetical protein slr1197 [Synechocystis sp. PCC 6803]
gi|3914979|sp|P73345|SMF_SYNY3 RecName: Full=Protein smf
gi|1652454|dbj|BAA17376.1| slr1197 [Synechocystis sp. PCC 6803]
Length = 398
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPP+NR L E+I G I +SE P G
Sbjct: 178 LGTGLDLIYPPQNRQLFEQIAAEGLI-LSEYPVG 210
>gi|254474217|ref|ZP_05087608.1| DNA processing chain A [Pseudovibrio sp. JE062]
gi|211956747|gb|EEA91956.1| DNA processing chain A [Pseudovibrio sp. JE062]
Length = 397
Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
AGG+D +YP EN L + G AISE+P
Sbjct: 182 AGGIDTVYPKENLELFSSMIATNGAAISEMP 212
>gi|237736954|ref|ZP_04567435.1| topoisomerase [Fusobacterium mortiferum ATCC 9817]
gi|229420816|gb|EEO35863.1| topoisomerase [Fusobacterium mortiferum ATCC 9817]
Length = 356
Score = 34.7 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP ENR + EEI + G+ +SE P G
Sbjct: 169 VGSGLDIIYPYENRKIWEEIGEK-GLLLSEYPMG 201
>gi|145300984|ref|YP_001143825.1| DNA processing chain A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853756|gb|ABO92077.1| DNA processing chain A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 371
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLDCLYP ++ L +I ++GG+ ISE+
Sbjct: 174 LGSGLDCLYPKRHQGLAGQILESGGLLISEL 204
>gi|330831508|ref|YP_004394460.1| DNA processing chain A [Aeromonas veronii B565]
gi|328806644|gb|AEB51843.1| DNA processing chain A [Aeromonas veronii B565]
Length = 371
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLDCLYP ++ L +I + GG+ ISE+
Sbjct: 174 LGSGLDCLYPKRHQGLAGQILEKGGLLISEL 204
>gi|290512103|ref|ZP_06551471.1| DNA processing protein [Klebsiella sp. 1_1_55]
gi|289775893|gb|EFD83893.1| DNA processing protein [Klebsiella sp. 1_1_55]
Length = 374
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + NL ++I DNGG +SE P
Sbjct: 167 LGNGLEQVYPRRHANLAQQIIDNGGTLVSEFPL 199
>gi|126733565|ref|ZP_01749312.1| DNA processing protein DprA, putative [Roseobacter sp. CCS2]
gi|126716431|gb|EBA13295.1| DNA processing protein DprA, putative [Roseobacter sp. CCS2]
Length = 379
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I G+ +SE+P G
Sbjct: 180 MAGGVDIIYPAENTQLAHDIAKR-GLRLSEMPMG 212
>gi|288933301|ref|YP_003437360.1| DNA protecting protein DprA [Klebsiella variicola At-22]
gi|288888030|gb|ADC56348.1| DNA protecting protein DprA [Klebsiella variicola At-22]
Length = 374
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + NL ++I DNGG +SE P
Sbjct: 167 LGNGLEQVYPRRHANLAQQIIDNGGTLVSEFPL 199
>gi|154253273|ref|YP_001414097.1| DNA protecting protein DprA [Parvibaculum lavamentivorans DS-1]
gi|154157223|gb|ABS64440.1| DNA protecting protein DprA [Parvibaculum lavamentivorans DS-1]
Length = 372
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD +YP ENR L I G + +SE+P G
Sbjct: 170 LAGGLDIVYPEENRELQTAIASQGAL-VSEMPPG 202
>gi|85705143|ref|ZP_01036243.1| DNA processing protein DprA, putative [Roseovarius sp. 217]
gi|85670465|gb|EAQ25326.1| DNA processing protein DprA, putative [Roseovarius sp. 217]
Length = 342
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I N G+ +SE P G
Sbjct: 139 MAGGVDVIYPAENSKLASDILAN-GLRLSEQPIG 171
>gi|333030447|ref|ZP_08458508.1| SMF family protein [Bacteroides coprosuis DSM 18011]
gi|332741044|gb|EGJ71526.1| SMF family protein [Bacteroides coprosuis DSM 18011]
Length = 310
Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL+ +YP +N +L + I +GG+ +SE P G
Sbjct: 186 LAHGLEKVYPYKNSSLADRILASGGVVLSEYPIG 219
>gi|313887109|ref|ZP_07820805.1| DNA protecting protein DprA [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923338|gb|EFR34151.1| DNA protecting protein DprA [Porphyromonas asaccharolytica
PR426713P-I]
Length = 384
Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL +YP +RNL I ++GG +SE P G
Sbjct: 179 LAHGLHMIYPSNHRNLARNIVNHGGALLSEYPAG 212
>gi|114327469|ref|YP_744626.1| DNA processing protein [Granulibacter bethesdensis CGDNIH1]
gi|114315643|gb|ABI61703.1| DNA processing protein [Granulibacter bethesdensis CGDNIH1]
Length = 378
Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YP EN L I G + ISE+P G
Sbjct: 163 VAGGLDCPYPRENIRLQSVIAKRGAV-ISELPLG 195
>gi|146305098|ref|YP_001185563.1| DNA protecting protein DprA [Pseudomonas mendocina ymp]
gi|145573299|gb|ABP82831.1| DNA protecting protein DprA [Pseudomonas mendocina ymp]
Length = 368
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+CLYP ++ L +I + GG +SE+P
Sbjct: 179 LGTGLECLYPARHKRLAAQIIEQGGALVSELPL 211
>gi|206579194|ref|YP_002236312.1| DNA protecting protein DprA [Klebsiella pneumoniae 342]
gi|206568252|gb|ACI10028.1| DNA protecting protein DprA [Klebsiella pneumoniae 342]
Length = 360
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + NL ++I DNGG +SE P
Sbjct: 167 LGNGLEQVYPRRHANLAQQIIDNGGTLVSEFPL 199
>gi|95929065|ref|ZP_01311810.1| DNA processing protein DprA, putative [Desulfuromonas acetoxidans
DSM 684]
gi|95134966|gb|EAT16620.1| DNA processing protein DprA, putative [Desulfuromonas acetoxidans
DSM 684]
Length = 363
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP ENR+L E+I + GI +SE P G
Sbjct: 173 GIDLIYPKENRHLFEQIGEK-GIIVSEYPPG 202
>gi|188582755|ref|YP_001926200.1| DNA protecting protein DprA [Methylobacterium populi BJ001]
gi|179346253|gb|ACB81665.1| DNA protecting protein DprA [Methylobacterium populi BJ001]
Length = 397
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L++ I D GG ++E+P G
Sbjct: 166 LAGGQDKIYPETHAGLVDAIVDAGGAVVAEMPMG 199
>gi|188586006|ref|YP_001917551.1| DNA protecting protein DprA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350693|gb|ACB84963.1| DNA protecting protein DprA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 349
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ GLD +YPPENR L ++I + G+ ISE P
Sbjct: 163 LGNGLDIIYPPENRELYKQISEK-GLLISEYP 193
>gi|117621477|ref|YP_854788.1| DNA protecting protein DprA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562884|gb|ABK39832.1| DNA protecting protein DprA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 371
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLDCLYP ++ L EI GG+ ISE+
Sbjct: 174 LGSGLDCLYPKRHQGLAMEILVRGGLLISEL 204
>gi|254463787|ref|ZP_05077198.1| DNA protecting protein DprA [Rhodobacterales bacterium Y4I]
gi|206684695|gb|EDZ45177.1| DNA protecting protein DprA [Rhodobacterales bacterium Y4I]
Length = 365
Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP EN L EEI G+ +SE P G
Sbjct: 153 LAGGADVIYPAENTRLAEEICKT-GLRLSEQPMG 185
>gi|218263971|ref|ZP_03477902.1| hypothetical protein PRABACTJOHN_03592 [Parabacteroides johnsonii
DSM 18315]
gi|218222382|gb|EEC95032.1| hypothetical protein PRABACTJOHN_03592 [Parabacteroides johnsonii
DSM 18315]
Length = 322
Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 1 MAGGLD--CLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN L ++I + GG+ +SE P G
Sbjct: 179 LANGLDWESIYPKENLELAKDIVEKGGLLLSEYPVG 214
>gi|156932269|ref|YP_001436185.1| DNA protecting protein DprA [Cronobacter sakazakii ATCC BAA-894]
gi|156530523|gb|ABU75349.1| hypothetical protein ESA_00040 [Cronobacter sakazakii ATCC BAA-894]
Length = 370
Score = 33.9 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP +R L EEI + GG +SE PF
Sbjct: 167 LGNGLAQVYPTRHRKLAEEIVERGGALVSEFPF 199
>gi|261378982|ref|ZP_05983555.1| putative DNA processing protein DprA [Neisseria cinerea ATCC 14685]
gi|269144597|gb|EEZ71015.1| putative DNA processing protein DprA [Neisseria cinerea ATCC 14685]
Length = 397
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI + G I +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEIAEKGLI-VSEFPIG 209
>gi|296315164|ref|ZP_06865105.1| putative DNA processing protein DprA [Neisseria polysaccharea ATCC
43768]
gi|296837973|gb|EFH21911.1| putative DNA processing protein DprA [Neisseria polysaccharea ATCC
43768]
Length = 397
Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI + G I +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEIAEKGLI-VSEFPIG 209
>gi|257063753|ref|YP_003143425.1| DNA protecting protein DprA [Slackia heliotrinireducens DSM 20476]
gi|256791406|gb|ACV22076.1| DNA protecting protein DprA [Slackia heliotrinireducens DSM 20476]
Length = 319
Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GG D YP EN +L +++ D GG +SE P+
Sbjct: 109 LGGGCDMPYPVENFDLFQQVVDAGGAVVSEHPW 141
Searching..................................................done
Results from round 2
>gi|150396156|ref|YP_001326623.1| DNA protecting protein DprA [Sinorhizobium medicae WSM419]
gi|150027671|gb|ABR59788.1| DNA protecting protein DprA [Sinorhizobium medicae WSM419]
Length = 383
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI GG+AISE+PFG
Sbjct: 178 LAGGLDRPYPPENIGLLQEIVSGGGLAISEMPFG 211
>gi|222085614|ref|YP_002544144.1| DNA protecting protein DprA [Agrobacterium radiobacter K84]
gi|221723062|gb|ACM26218.1| DNA protecting protein DprA [Agrobacterium radiobacter K84]
Length = 383
Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD YPPEN LL EIWD G+A+SE+PFG
Sbjct: 178 MAGGLDQPYPPENVGLLNEIWDGNGLAVSEMPFG 211
>gi|49475582|ref|YP_033623.1| DNA processing chain A [Bartonella henselae str. Houston-1]
gi|49238389|emb|CAF27616.1| DNA processing chain A [Bartonella henselae str. Houston-1]
Length = 410
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L E+I NGG ISE+P G
Sbjct: 184 MAGGIDHIYPPENKKLHEDIIANGGAIISEMPIG 217
>gi|222148310|ref|YP_002549267.1| DNA protecting protein DprA [Agrobacterium vitis S4]
gi|221735298|gb|ACM36261.1| DNA protecting protein DprA [Agrobacterium vitis S4]
Length = 383
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN +LL++IWD G+AISE+PFG
Sbjct: 178 LAGGLDRPYPPENVDLLKDIWDGKGVAISEMPFG 211
>gi|319408534|emb|CBI82187.1| DNA processing chain A [Bartonella schoenbuchensis R1]
Length = 404
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 178 MAGGIDHIYPPENKKLYDDIITNGGAIISEMPVG 211
>gi|307301126|ref|ZP_07580895.1| DNA protecting protein DprA [Sinorhizobium meliloti BL225C]
gi|306904081|gb|EFN34667.1| DNA protecting protein DprA [Sinorhizobium meliloti BL225C]
Length = 383
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLLQEIVSGEGLAVSEMPFG 211
>gi|319898957|ref|YP_004159050.1| DNA processing chain A [Bartonella clarridgeiae 73]
gi|319402921|emb|CBI76472.1| DNA processing chain A [Bartonella clarridgeiae 73]
Length = 383
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 157 MAGGIDHIYPPENKKLYDDILANGGAIISEMPIG 190
>gi|319404285|emb|CBI77878.1| DNA processing chain A [Bartonella rochalimae ATCC BAA-1498]
Length = 383
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 167 MAGGIDHIYPPENQKLYDDILANGGAIISEMPIG 200
>gi|319405728|emb|CBI79351.1| DNA processing chain A [Bartonella sp. AR 15-3]
Length = 383
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 167 MAGGIDYIYPPENKKLYDDILTNGGAIISEMPIG 200
>gi|15965054|ref|NP_385407.1| hypothetical protein SMc01363 [Sinorhizobium meliloti 1021]
gi|15074233|emb|CAC45880.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 383
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLLQEIVSGEGLAVSEMPFG 211
>gi|307317859|ref|ZP_07597297.1| DNA protecting protein DprA [Sinorhizobium meliloti AK83]
gi|306896621|gb|EFN27369.1| DNA protecting protein DprA [Sinorhizobium meliloti AK83]
Length = 383
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLLQEIVSGEGLAVSEMPFG 211
>gi|15888630|ref|NP_354311.1| DNA processing chain A [Agrobacterium tumefaciens str. C58]
gi|15156358|gb|AAK87096.1| DNA processing chain A [Agrobacterium tumefaciens str. C58]
Length = 380
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP EN LL++I+D GG ISE+PFG
Sbjct: 178 LAGGLDRPYPQENFGLLQDIYDQGGATISEMPFG 211
>gi|240850661|ref|YP_002972061.1| DNA processing chain A [Bartonella grahamii as4aup]
gi|240267784|gb|ACS51372.1| DNA processing chain A [Bartonella grahamii as4aup]
Length = 404
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MAGG+D +YPPEN+ L E+I NGG ISE+P
Sbjct: 178 MAGGIDHIYPPENKRLYEDIIANGGAIISEMPI 210
>gi|319407290|emb|CBI80931.1| DNA processing chain A [Bartonella sp. 1-1C]
Length = 383
Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YPPEN+ L ++I NGG ISE+P G
Sbjct: 167 MAGGIDYIYPPENQKLYDDILANGGAIISEMPIG 200
>gi|260424749|ref|ZP_05733144.2| DNA processing protein DprA [Dialister invisus DSM 15470]
gi|260403042|gb|EEW96589.1| DNA processing protein DprA [Dialister invisus DSM 15470]
Length = 363
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YPPEN+NL ++I DNGG ISE P G
Sbjct: 170 LACGLDHVYPPENKNLFQKIIDNGGTIISEYPPG 203
>gi|209548899|ref|YP_002280816.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534655|gb|ACI54590.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 380
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LLEEI G+A+SE+PFG
Sbjct: 178 LAGGLDQPYPPENIGLLEEITSGNGLAVSEMPFG 211
>gi|227821656|ref|YP_002825626.1| DNA processing chain A [Sinorhizobium fredii NGR234]
gi|227340655|gb|ACP24873.1| DNA processing chain A [Sinorhizobium fredii NGR234]
Length = 386
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LL+EI G+AISE+PFG
Sbjct: 178 LAGGLDRPYPPENIGLLQEITAGEGLAISEMPFG 211
>gi|49474246|ref|YP_032288.1| DNA processing chain A [Bartonella quintana str. Toulouse]
gi|49239750|emb|CAF26132.1| DNA processing chain A [Bartonella quintana str. Toulouse]
Length = 410
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MAGG+D +YPPEN+ L E+I +GG ISE+P
Sbjct: 184 MAGGVDHIYPPENKKLHEDIITHGGAIISEMPI 216
>gi|116251502|ref|YP_767340.1| smf protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256150|emb|CAK07231.1| putative smf protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 380
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LLEEI G+A+SE+PFG
Sbjct: 178 LAGGLDQPYPPENIGLLEEITGGNGLAVSEMPFG 211
>gi|325292667|ref|YP_004278531.1| DNA processing chain A [Agrobacterium sp. H13-3]
gi|325060520|gb|ADY64211.1| DNA processing chain A [Agrobacterium sp. H13-3]
Length = 379
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP EN LL++I++ GG ISE+PFG
Sbjct: 178 LAGGLDRPYPQENFGLLQDIYEEGGATISEMPFG 211
>gi|241204123|ref|YP_002975219.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858013|gb|ACS55680.1| DNA protecting protein DprA [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 380
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN LLEEI G+A+SE+PFG
Sbjct: 178 LAGGLDQPYPPENIGLLEEITGGNGLAVSEMPFG 211
>gi|218513189|ref|ZP_03510029.1| DNA processing chain A protein [Rhizobium etli 8C-3]
Length = 352
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 165 LAGGLDRPYPPENLGLIEEIAGGNGLAVSEMPFG 198
>gi|190891322|ref|YP_001977864.1| DNA processing chain A protein [Rhizobium etli CIAT 652]
gi|190696601|gb|ACE90686.1| DNA processing chain A protein [Rhizobium etli CIAT 652]
Length = 380
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 178 LAGGLDRPYPPENLGLIEEIAGGNGLAVSEMPFG 211
>gi|163868294|ref|YP_001609503.1| DNA processing chain A [Bartonella tribocorum CIP 105476]
gi|161017950|emb|CAK01508.1| DNA processing chain A [Bartonella tribocorum CIP 105476]
Length = 404
Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MAGG++ +YPPEN+ L E+I NGG ISE+P
Sbjct: 178 MAGGINHIYPPENKKLYEDIIANGGAIISEMPI 210
>gi|86357273|ref|YP_469165.1| DNA processing chain A protein [Rhizobium etli CFN 42]
gi|86281375|gb|ABC90438.1| probable DNA processing chain A protein [Rhizobium etli CFN 42]
Length = 380
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 178 LAGGLDKPYPPENLGLIEEITGGNGLAVSEMPFG 211
>gi|218674768|ref|ZP_03524437.1| DNA processing chain A protein [Rhizobium etli GR56]
Length = 380
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 178 LAGGLDKPYPPENHGLIEEIAGGNGLAVSEMPFG 211
>gi|315122272|ref|YP_004062761.1| hypothetical protein CKC_02620 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495674|gb|ADR52273.1| hypothetical protein CKC_02620 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 298
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLDCLYPPENR+LLEEIW + GIAISE+PFG
Sbjct: 179 MAGGLDCLYPPENRSLLEEIW-HEGIAISEMPFG 211
>gi|121602381|ref|YP_989130.1| DNA protecting protein DprA [Bartonella bacilliformis KC583]
gi|120614558|gb|ABM45159.1| DNA protecting protein DprA [Bartonella bacilliformis KC583]
Length = 396
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MAGG+D +YP EN+ L +I DNGG ISE+P
Sbjct: 172 MAGGIDHIYPSENKKLYNDIIDNGGAIISEMPI 204
>gi|27380215|ref|NP_771744.1| DNA processing protein [Bradyrhizobium japonicum USDA 110]
gi|27353369|dbj|BAC50369.1| DNA processing protein [Bradyrhizobium japonicum USDA 110]
Length = 380
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG DC+YPPE+ +LL I D+ G AISE+P G
Sbjct: 183 LAGGHDCIYPPEHGDLLTSILDHAGAAISEMPLG 216
>gi|254780304|ref|YP_003064717.1| DNA protecting protein DprA [Candidatus Liberibacter asiaticus
str. psy62]
gi|254039981|gb|ACT56777.1| DNA protecting protein DprA [Candidatus Liberibacter asiaticus
str. psy62]
Length = 34
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/34 (100%), Positives = 34/34 (100%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG
Sbjct: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
>gi|115525378|ref|YP_782289.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisA53]
gi|115519325|gb|ABJ07309.1| DNA protecting protein DprA [Rhodopseudomonas palustris BisA53]
Length = 372
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL +I GG AISE+P G
Sbjct: 175 LAGGHDRIYPPEHEDLLADILAQGGAAISEMPLG 208
>gi|328543466|ref|YP_004303575.1| DNA protecting protein DprA [polymorphum gilvum SL003B-26A1]
gi|326413210|gb|ADZ70273.1| DNA protecting protein DprA, putative [Polymorphum gilvum
SL003B-26A1]
Length = 380
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYPPE+ LL I D GG AISE+PFG
Sbjct: 179 AGGIDILYPPEHDGLLARILDAGGSAISEMPFG 211
>gi|163759336|ref|ZP_02166422.1| putative smf protein [Hoeflea phototrophica DFL-43]
gi|162283740|gb|EDQ34025.1| putative smf protein [Hoeflea phototrophica DFL-43]
Length = 383
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN +L +EI G+AISE+P G
Sbjct: 178 LAGGLDQPYPPENLDLYDEIRAGKGLAISEMPMG 211
>gi|218506638|ref|ZP_03504516.1| DNA processing chain A protein [Rhizobium etli Brasil 5]
Length = 167
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GGLD YPPEN L+EEI G+A+SE+PFG
Sbjct: 39 LPGGLDRPYPPENLGLIEEIAGGNGLAVSEMPFG 72
>gi|299135144|ref|ZP_07028335.1| DNA protecting protein DprA [Afipia sp. 1NLS2]
gi|298590121|gb|EFI50325.1| DNA protecting protein DprA [Afipia sp. 1NLS2]
Length = 373
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ LL I D GG AISE+P G
Sbjct: 176 LAGGHDRIYPPEHEGLLAAIIDAGGGAISEMPLG 209
>gi|304391708|ref|ZP_07373650.1| DNA protecting protein DprA [Ahrensia sp. R2A130]
gi|303295937|gb|EFL90295.1| DNA protecting protein DprA [Ahrensia sp. R2A130]
Length = 378
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYPPEN LL+ I GG AISE+P G
Sbjct: 178 AGGVDHLYPPENGPLLDAILATGGAAISEMPLG 210
>gi|148256077|ref|YP_001240662.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. BTAi1]
gi|146408250|gb|ABQ36756.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. BTAi1]
Length = 372
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL I + G AISE+P G
Sbjct: 175 LAGGHDRIYPPEHIDLLGAIVERNGAAISEMPLG 208
>gi|220929474|ref|YP_002506383.1| DNA protecting protein DprA [Clostridium cellulolyticum H10]
gi|219999802|gb|ACL76403.1| DNA protecting protein DprA [Clostridium cellulolyticum H10]
Length = 374
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPEN L ++I D+GG+A+SE P G
Sbjct: 171 LGSGLDNIYPPENAGLFKDIIDSGGLALSEYPPG 204
>gi|153010990|ref|YP_001372204.1| DNA protecting protein DprA [Ochrobactrum anthropi ATCC 49188]
gi|151562878|gb|ABS16375.1| DNA protecting protein DprA [Ochrobactrum anthropi ATCC 49188]
Length = 388
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPEN L I + GG ISE+P G
Sbjct: 178 LAGGLDCPYPPENLPLYHAIPEQGGALISEMPMG 211
>gi|90423747|ref|YP_532117.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB18]
gi|90105761|gb|ABD87798.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB18]
Length = 372
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ LL I GG AISE+P G
Sbjct: 175 LAGGHDKIYPPEHDELLAAILGEGGAAISEMPLG 208
>gi|146341416|ref|YP_001206464.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. ORS278]
gi|146194222|emb|CAL78244.1| DNA processing chain A (DprA/Smf) [Bradyrhizobium sp. ORS278]
Length = 371
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL I + G AISE+P G
Sbjct: 174 LAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLG 207
>gi|91977499|ref|YP_570158.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB5]
gi|91683955|gb|ABE40257.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
BisB5]
Length = 422
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL +I + G AISE+P G
Sbjct: 225 LAGGHDKIYPPEHEDLLLDIVEARGAAISEMPLG 258
>gi|306845936|ref|ZP_07478503.1| DNA protecting protein DprA [Brucella sp. BO1]
gi|306273571|gb|EFM55416.1| DNA protecting protein DprA [Brucella sp. BO1]
Length = 393
Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|294853600|ref|ZP_06794272.1| DNA processing protein [Brucella sp. NVSL 07-0026]
gi|294819255|gb|EFG36255.1| DNA processing protein [Brucella sp. NVSL 07-0026]
Length = 393
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|254720411|ref|ZP_05182222.1| SMF protein [Brucella sp. 83/13]
gi|265985430|ref|ZP_06098165.1| DNA protecting protein DprA [Brucella sp. 83/13]
gi|306839012|ref|ZP_07471833.1| DNA protecting protein DprA [Brucella sp. NF 2653]
gi|264664022|gb|EEZ34283.1| DNA protecting protein DprA [Brucella sp. 83/13]
gi|306405918|gb|EFM62176.1| DNA protecting protein DprA [Brucella sp. NF 2653]
Length = 393
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|23500346|ref|NP_699786.1| DNA processing protein DprA [Brucella suis 1330]
gi|161620664|ref|YP_001594550.1| DNA protecting protein DprA [Brucella canis ATCC 23365]
gi|254702977|ref|ZP_05164805.1| DNA protecting protein DprA [Brucella suis bv. 3 str. 686]
gi|260568110|ref|ZP_05838579.1| SMF protein [Brucella suis bv. 4 str. 40]
gi|261753586|ref|ZP_05997295.1| DNA protecting protein DprA [Brucella suis bv. 3 str. 686]
gi|23463962|gb|AAN33791.1| DNA processing protein DprA, putative [Brucella suis 1330]
gi|161337475|gb|ABX63779.1| DNA protecting protein DprA [Brucella canis ATCC 23365]
gi|260154775|gb|EEW89856.1| SMF protein [Brucella suis bv. 4 str. 40]
gi|261743339|gb|EEY31265.1| DNA protecting protein DprA [Brucella suis bv. 3 str. 686]
Length = 393
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|254699839|ref|ZP_05161667.1| SMF protein [Brucella suis bv. 5 str. 513]
gi|261750312|ref|ZP_05994021.1| DNA protecting protein DprA [Brucella suis bv. 5 str. 513]
gi|261740065|gb|EEY27991.1| DNA protecting protein DprA [Brucella suis bv. 5 str. 513]
Length = 393
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|225686388|ref|YP_002734360.1| DNA protecting protein DprA [Brucella melitensis ATCC 23457]
gi|256262471|ref|ZP_05465003.1| SMF protein [Brucella melitensis bv. 2 str. 63/9]
gi|225642493|gb|ACO02406.1| DNA protecting protein DprA [Brucella melitensis ATCC 23457]
gi|263092207|gb|EEZ16504.1| SMF protein [Brucella melitensis bv. 2 str. 63/9]
Length = 393
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|254691038|ref|ZP_05154292.1| SMF protein [Brucella abortus bv. 6 str. 870]
Length = 381
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 166 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 199
>gi|17989012|ref|NP_541645.1| SMF protein [Brucella melitensis bv. 1 str. 16M]
gi|62317541|ref|YP_223394.1| DNA processing protein DprA [Brucella abortus bv. 1 str. 9-941]
gi|83269522|ref|YP_418813.1| SMF protein [Brucella melitensis biovar Abortus 2308]
gi|189022796|ref|YP_001932537.1| SMF protein [Brucella abortus S19]
gi|225629094|ref|ZP_03787127.1| DNA protecting protein DprA [Brucella ceti str. Cudo]
gi|237817089|ref|ZP_04596081.1| DNA protecting protein DprA [Brucella abortus str. 2308 A]
gi|254698822|ref|ZP_05160650.1| SMF protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254705901|ref|ZP_05167729.1| SMF protein [Brucella pinnipedialis M163/99/10]
gi|254711129|ref|ZP_05172940.1| SMF protein [Brucella pinnipedialis B2/94]
gi|254712412|ref|ZP_05174223.1| SMF protein [Brucella ceti M644/93/1]
gi|254715484|ref|ZP_05177295.1| SMF protein [Brucella ceti M13/05/1]
gi|254732269|ref|ZP_05190847.1| SMF protein [Brucella abortus bv. 4 str. 292]
gi|256015379|ref|YP_003105388.1| DNA processing protein DprA, putative [Brucella microti CCM 4915]
gi|256029510|ref|ZP_05443124.1| SMF protein [Brucella pinnipedialis M292/94/1]
gi|256043499|ref|ZP_05446426.1| SMF protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256059205|ref|ZP_05449411.1| SMF protein [Brucella neotomae 5K33]
gi|256157705|ref|ZP_05455623.1| SMF protein [Brucella ceti M490/95/1]
gi|256253323|ref|ZP_05458859.1| SMF protein [Brucella ceti B1/94]
gi|256256223|ref|ZP_05461759.1| SMF protein [Brucella abortus bv. 9 str. C68]
gi|260167399|ref|ZP_05754210.1| DNA processing protein DprA, putative [Brucella sp. F5/99]
gi|260544777|ref|ZP_05820598.1| SMF protein [Brucella abortus NCTC 8038]
gi|260564694|ref|ZP_05835179.1| SMF protein [Brucella melitensis bv. 1 str. 16M]
gi|260760064|ref|ZP_05872412.1| DNA protecting protein DprA [Brucella abortus bv. 4 str. 292]
gi|260763303|ref|ZP_05875635.1| DNA protecting protein DprA [Brucella abortus bv. 2 str. 86/8/59]
gi|260882451|ref|ZP_05894065.1| DNA protecting protein DprA [Brucella abortus bv. 9 str. C68]
gi|261217219|ref|ZP_05931500.1| DNA protecting protein DprA [Brucella ceti M13/05/1]
gi|261220439|ref|ZP_05934720.1| DNA protecting protein DprA [Brucella ceti B1/94]
gi|261313331|ref|ZP_05952528.1| DNA protecting protein DprA [Brucella pinnipedialis M163/99/10]
gi|261318720|ref|ZP_05957917.1| DNA protecting protein DprA [Brucella pinnipedialis B2/94]
gi|261320090|ref|ZP_05959287.1| DNA protecting protein DprA [Brucella ceti M644/93/1]
gi|261323154|ref|ZP_05962351.1| DNA protecting protein DprA [Brucella neotomae 5K33]
gi|261756809|ref|ZP_06000518.1| SMF protein [Brucella sp. F5/99]
gi|265986518|ref|ZP_06099075.1| DNA protecting protein DprA [Brucella pinnipedialis M292/94/1]
gi|265989917|ref|ZP_06102474.1| DNA protecting protein DprA [Brucella melitensis bv. 1 str. Rev.1]
gi|265996210|ref|ZP_06108767.1| DNA protecting protein DprA [Brucella ceti M490/95/1]
gi|297249580|ref|ZP_06933281.1| DNA processing protein [Brucella abortus bv. 5 str. B3196]
gi|17984851|gb|AAL53909.1| smf protein [Brucella melitensis bv. 1 str. 16M]
gi|62197734|gb|AAX76033.1| hypothetical DprA, DNA processing protein [Brucella abortus bv. 1
str. 9-941]
gi|82939796|emb|CAJ12804.1| SMF protein [Brucella melitensis biovar Abortus 2308]
gi|189021370|gb|ACD74091.1| SMF protein [Brucella abortus S19]
gi|225615590|gb|EEH12639.1| DNA protecting protein DprA [Brucella ceti str. Cudo]
gi|237787902|gb|EEP62118.1| DNA protecting protein DprA [Brucella abortus str. 2308 A]
gi|255998039|gb|ACU49726.1| DNA processing protein DprA, putative [Brucella microti CCM 4915]
gi|260098048|gb|EEW81922.1| SMF protein [Brucella abortus NCTC 8038]
gi|260152337|gb|EEW87430.1| SMF protein [Brucella melitensis bv. 1 str. 16M]
gi|260670382|gb|EEX57322.1| DNA protecting protein DprA [Brucella abortus bv. 4 str. 292]
gi|260673724|gb|EEX60545.1| DNA protecting protein DprA [Brucella abortus bv. 2 str. 86/8/59]
gi|260871979|gb|EEX79048.1| DNA protecting protein DprA [Brucella abortus bv. 9 str. C68]
gi|260919023|gb|EEX85676.1| DNA protecting protein DprA [Brucella ceti B1/94]
gi|260922308|gb|EEX88876.1| DNA protecting protein DprA [Brucella ceti M13/05/1]
gi|261292780|gb|EEX96276.1| DNA protecting protein DprA [Brucella ceti M644/93/1]
gi|261297943|gb|EEY01440.1| DNA protecting protein DprA [Brucella pinnipedialis B2/94]
gi|261299134|gb|EEY02631.1| DNA protecting protein DprA [Brucella neotomae 5K33]
gi|261302357|gb|EEY05854.1| DNA protecting protein DprA [Brucella pinnipedialis M163/99/10]
gi|261736793|gb|EEY24789.1| SMF protein [Brucella sp. F5/99]
gi|262550507|gb|EEZ06668.1| DNA protecting protein DprA [Brucella ceti M490/95/1]
gi|263000586|gb|EEZ13276.1| DNA protecting protein DprA [Brucella melitensis bv. 1 str. Rev.1]
gi|264658715|gb|EEZ28976.1| DNA protecting protein DprA [Brucella pinnipedialis M292/94/1]
gi|297173449|gb|EFH32813.1| DNA processing protein [Brucella abortus bv. 5 str. B3196]
Length = 393
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|254695655|ref|ZP_05157483.1| SMF protein [Brucella abortus bv. 3 str. Tulya]
gi|261216055|ref|ZP_05930336.1| DNA protecting protein DprA [Brucella abortus bv. 3 str. Tulya]
gi|260917662|gb|EEX84523.1| DNA protecting protein DprA [Brucella abortus bv. 3 str. Tulya]
Length = 393
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|256111481|ref|ZP_05452495.1| SMF protein [Brucella melitensis bv. 3 str. Ether]
gi|265992978|ref|ZP_06105535.1| DNA protecting protein DprA [Brucella melitensis bv. 3 str. Ether]
gi|262763848|gb|EEZ09880.1| DNA protecting protein DprA [Brucella melitensis bv. 3 str. Ether]
Length = 388
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|326410760|gb|ADZ67824.1| DNA protecting protein DprA [Brucella melitensis M28]
gi|326554052|gb|ADZ88691.1| DNA protecting protein DprA [Brucella melitensis M5-90]
Length = 393
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPKNGGALITEMPMG 211
>gi|77918023|ref|YP_355838.1| Rossmann-fold nucleotide-binding protein [Pelobacter carbinolicus
DSM 2380]
gi|77544106|gb|ABA87668.1| DNA protecting protein DprA [Pelobacter carbinolicus DSM 2380]
Length = 366
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L +I D GG +SE P G
Sbjct: 171 LGCGIDRIYPAENKQLFNDILDQGGAILSEYPPG 204
>gi|306841750|ref|ZP_07474436.1| DNA protecting protein DprA [Brucella sp. BO2]
gi|306288155|gb|EFM59542.1| DNA protecting protein DprA [Brucella sp. BO2]
Length = 345
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 130 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 163
>gi|260756634|ref|ZP_05868982.1| DNA protecting protein DprA [Brucella abortus bv. 6 str. 870]
gi|260676742|gb|EEX63563.1| DNA protecting protein DprA [Brucella abortus bv. 6 str. 870]
Length = 343
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 128 LAGGLDRPYPPENLPLYRAIPENGGALITEMPMG 161
>gi|303228920|ref|ZP_07315730.1| DNA protecting protein DprA [Veillonella atypica ACS-134-V-Col7a]
gi|302516334|gb|EFL58266.1| DNA protecting protein DprA [Veillonella atypica ACS-134-V-Col7a]
Length = 378
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YPPEN+ L + + N G+ +SE P G
Sbjct: 180 MGCGLDIVYPPENKRLFDAVLKNNGLLVSEYPPG 213
>gi|319783706|ref|YP_004143182.1| DNA protecting protein DprA [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169594|gb|ADV13132.1| DNA protecting protein DprA [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 379
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L EEI G ISE+PFG
Sbjct: 175 LAGGLDQPYPPENAGLCEEI-AERGAIISEMPFG 207
>gi|303231443|ref|ZP_07318174.1| DNA protecting protein DprA [Veillonella atypica ACS-049-V-Sch6]
gi|302513880|gb|EFL55891.1| DNA protecting protein DprA [Veillonella atypica ACS-049-V-Sch6]
Length = 378
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YPPEN+ L + + N G+ +SE P G
Sbjct: 180 MGCGLDIVYPPENKRLFDAVLKNNGLLVSEYPPG 213
>gi|290968766|ref|ZP_06560303.1| DNA protecting protein DprA [Megasphaera genomosp. type_1 str. 28L]
gi|290781062|gb|EFD93653.1| DNA protecting protein DprA [Megasphaera genomosp. type_1 str. 28L]
Length = 363
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP EN+ L EEI NGG ISE PFG
Sbjct: 172 VASGLDITYPRENKKLFEEIAANGGGIISEYPFG 205
>gi|325290385|ref|YP_004266566.1| DNA protecting protein DprA [Syntrophobotulus glycolicus DSM 8271]
gi|324965786|gb|ADY56565.1| DNA protecting protein DprA [Syntrophobotulus glycolicus DSM 8271]
Length = 383
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD +YPPENR L EI +N G ISE P G
Sbjct: 172 LAGGLDRIYPPENRKLAAEIIEN-GALISEYPPG 204
>gi|114707187|ref|ZP_01440085.1| DNA processing chain A [Fulvimarina pelagi HTCC2506]
gi|114537383|gb|EAU40509.1| DNA processing chain A [Fulvimarina pelagi HTCC2506]
Length = 377
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGLD YPPENR+L+ I D GG IS PFG
Sbjct: 177 AGGLDMPYPPENRSLMRRIVDEGGCLISARPFG 209
>gi|209884919|ref|YP_002288776.1| SMF protein [Oligotropha carboxidovorans OM5]
gi|209873115|gb|ACI92911.1| SMF protein [Oligotropha carboxidovorans OM5]
Length = 377
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL+ I G AISE+ G
Sbjct: 176 LAGGHDRIYPPEHESLLDAILAANGGAISEMQLG 209
>gi|163844754|ref|YP_001622409.1| DNA protecting protein DprA [Brucella suis ATCC 23445]
gi|163675477|gb|ABY39587.1| DNA protecting protein DprA [Brucella suis ATCC 23445]
Length = 393
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGGLDRPYPPENLPLYRAIPENGGALITEVPMG 211
>gi|86749541|ref|YP_486037.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
HaA2]
gi|86572569|gb|ABD07126.1| DNA processing protein DprA, putative [Rhodopseudomonas palustris
HaA2]
Length = 378
Score = 48.2 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I + G AISE+P G
Sbjct: 181 LAGGHDKIYPAEHEDLLLDIIEARGAAISEMPLG 214
>gi|192291901|ref|YP_001992506.1| DNA protecting protein DprA [Rhodopseudomonas palustris TIE-1]
gi|192285650|gb|ACF02031.1| DNA protecting protein DprA [Rhodopseudomonas palustris TIE-1]
Length = 378
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I G AISE+P G
Sbjct: 181 LAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLG 214
>gi|148558431|ref|YP_001257589.1| SMF protein [Brucella ovis ATCC 25840]
gi|148369716|gb|ABQ62588.1| SMF protein [Brucella ovis ATCC 25840]
Length = 393
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AG LD YPPEN L I +NGG I+E+P G
Sbjct: 178 LAGRLDRPYPPENLPLYRAIPENGGALITEMPMG 211
>gi|39936183|ref|NP_948459.1| DNA processing protein DprA [Rhodopseudomonas palustris CGA009]
gi|39650038|emb|CAE28561.1| DNA processing chain A [Rhodopseudomonas palustris CGA009]
Length = 380
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I G AISE+P G
Sbjct: 183 LAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLG 216
>gi|220923237|ref|YP_002498539.1| DNA protecting protein DprA [Methylobacterium nodulans ORS 2060]
gi|219947844|gb|ACL58236.1| DNA protecting protein DprA [Methylobacterium nodulans ORS 2060]
Length = 391
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ L I D+GG ++E+P G
Sbjct: 166 LAGGHDRIYPAEHEPLAARILDHGGAIVAEMPLG 199
>gi|260459178|ref|ZP_05807433.1| DNA protecting protein DprA [Mesorhizobium opportunistum WSM2075]
gi|259034732|gb|EEW35988.1| DNA protecting protein DprA [Mesorhizobium opportunistum WSM2075]
Length = 383
Score = 47.9 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L +EI G ISE+PFG
Sbjct: 182 LAGGLDLPYPPENAGLCDEI-AERGAVISEMPFG 214
>gi|329121225|ref|ZP_08249852.1| DNA processing protein DprA [Dialister micraerophilus DSM 19965]
gi|327470159|gb|EGF15622.1| DNA processing protein DprA [Dialister micraerophilus DSM 19965]
Length = 363
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP ENRNL E+I +GG ISE G
Sbjct: 170 ACGLDKTYPAENRNLFEKIIAHGGCIISEYAPG 202
>gi|254501021|ref|ZP_05113172.1| DNA protecting protein DprA, putative [Labrenzia alexandrii DFL-11]
gi|222437092|gb|EEE43771.1| DNA protecting protein DprA, putative [Labrenzia alexandrii DFL-11]
Length = 378
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYP ++ LL I GG ISE+PFG
Sbjct: 177 AGGIDVLYPSDHDRLLAAILQTGGAVISEMPFG 209
>gi|307946437|ref|ZP_07661772.1| DNA protecting protein DprA [Roseibium sp. TrichSKD4]
gi|307770101|gb|EFO29327.1| DNA protecting protein DprA [Roseibium sp. TrichSKD4]
Length = 378
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYPP++ LL + + GG AI+E+PFG
Sbjct: 177 AGGIDILYPPDHAGLLSSLLERGGNAITEMPFG 209
>gi|256832232|ref|YP_003160959.1| DNA protecting protein DprA [Jonesia denitrificans DSM 20603]
gi|256685763|gb|ACV08656.1| DNA protecting protein DprA [Jonesia denitrificans DSM 20603]
Length = 395
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP N+ LL+ + D+ G +SE+P G
Sbjct: 163 LAGGVDRLYPQGNKKLLQRLIDH-GALVSEMPVG 195
>gi|163792865|ref|ZP_02186841.1| Predicted Rossmann fold nucleotide-binding protein [alpha
proteobacterium BAL199]
gi|159181511|gb|EDP66023.1| Predicted Rossmann fold nucleotide-binding protein [alpha
proteobacterium BAL199]
Length = 379
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YPPE+ LL++I +N GIA++E+P G
Sbjct: 173 LAGGIDVTYPPEHAGLLQQIVEN-GIAVAEMPVG 205
>gi|316933647|ref|YP_004108629.1| DNA protecting protein DprA [Rhodopseudomonas palustris DX-1]
gi|315601361|gb|ADU43896.1| DNA protecting protein DprA [Rhodopseudomonas palustris DX-1]
Length = 378
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I + G AISE+P G
Sbjct: 181 LAGGHDKIYPAEHEDLLLDIVQSRGAAISEMPLG 214
>gi|313892558|ref|ZP_07826145.1| DNA protecting protein DprA [Dialister microaerophilus UPII 345-E]
gi|313118955|gb|EFR42160.1| DNA protecting protein DprA [Dialister microaerophilus UPII 345-E]
Length = 363
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP ENRNL E+I +GG ISE G
Sbjct: 170 ACGLDKTYPAENRNLFEKIIAHGGCIISEYAPG 202
>gi|237795718|ref|YP_002863270.1| DNA uptake protein [Clostridium botulinum Ba4 str. 657]
gi|229261789|gb|ACQ52822.1| DNA uptake protein [Clostridium botulinum Ba4 str. 657]
Length = 385
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN L + I +NGG ISE P G
Sbjct: 178 LAHGLDMIYPRENIELSKSILNNGGTLISEYPVG 211
>gi|92117808|ref|YP_577537.1| DNA processing protein DprA, putative [Nitrobacter hamburgensis
X14]
gi|91800702|gb|ABE63077.1| DNA processing protein DprA, putative [Nitrobacter hamburgensis
X14]
Length = 372
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YPPE+ +LL I ++GG AISE+P G
Sbjct: 175 LAGGHDRIYPPEHEDLLAAILEDGG-AISEMPMG 207
>gi|25028474|ref|NP_738528.1| putative DNA processing protein [Corynebacterium efficiens YS-314]
gi|259507533|ref|ZP_05750433.1| Rossmann-fold nucleotide-binding protein [Corynebacterium efficiens
YS-314]
gi|23493759|dbj|BAC18728.1| putative DNA processing protein [Corynebacterium efficiens YS-314]
gi|259164918|gb|EEW49472.1| Rossmann-fold nucleotide-binding protein [Corynebacterium efficiens
YS-314]
Length = 403
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP NR L EE+ + GG ++E P G
Sbjct: 194 ACGLDRSYPAHNRGLFEEVVNRGGAIVTEYPPG 226
>gi|118590183|ref|ZP_01547586.1| hypothetical protein SIAM614_11733 [Stappia aggregata IAM 12614]
gi|118437155|gb|EAV43793.1| hypothetical protein SIAM614_11733 [Stappia aggregata IAM 12614]
Length = 378
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG++ LYPPE+ LL + + GG ISE+P G
Sbjct: 177 AGGINVLYPPEHDRLLAAVLETGGAVISEMPLG 209
>gi|144898216|emb|CAM75080.1| DNA processing chain A [Magnetospirillum gryphiswaldense MSR-1]
Length = 377
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L ++I G A+SE+P G
Sbjct: 173 LAGGVDVVYPPENQRLYDDIVAM-GCAVSEMPPG 205
>gi|240140065|ref|YP_002964542.1| DNA protecting protein DprA [Methylobacterium extorquens AM1]
gi|240010039|gb|ACS41265.1| DNA protecting protein DprA [Methylobacterium extorquens AM1]
Length = 397
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDRIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|238019258|ref|ZP_04599684.1| hypothetical protein VEIDISOL_01122 [Veillonella dispar ATCC 17748]
gi|237863957|gb|EEP65247.1| hypothetical protein VEIDISOL_01122 [Veillonella dispar ATCC 17748]
Length = 408
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YP EN L + I N G+ +SE P G
Sbjct: 179 MGCGLDIVYPRENTKLFDRILQNNGLLVSEYPPG 212
>gi|218531570|ref|YP_002422386.1| DNA protecting protein DprA [Methylobacterium chloromethanicum CM4]
gi|218523873|gb|ACK84458.1| DNA protecting protein DprA [Methylobacterium chloromethanicum CM4]
Length = 397
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDRIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|326204632|ref|ZP_08194488.1| DNA protecting protein DprA [Clostridium papyrosolvens DSM 2782]
gi|325985199|gb|EGD46039.1| DNA protecting protein DprA [Clostridium papyrosolvens DSM 2782]
Length = 374
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN L +EI D+ G+ +SE P G
Sbjct: 171 LGSGLDNIYPQENAGLFKEIIDSKGLVLSEYPPG 204
>gi|225849802|ref|YP_002730036.1| protein smf (DNA-processing chain A) [Persephonella marina EX-H1]
gi|225645083|gb|ACO03269.1| protein smf (DNA-processing chain A) [Persephonella marina EX-H1]
Length = 352
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPPEN+ L E I +N G ISE P G
Sbjct: 169 LGCGIDIAYPPENKKLYERIIEN-GAVISEFPMG 201
>gi|163852730|ref|YP_001640773.1| DNA protecting protein DprA [Methylobacterium extorquens PA1]
gi|163664335|gb|ABY31702.1| DNA protecting protein DprA [Methylobacterium extorquens PA1]
Length = 397
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDRIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|91205528|ref|YP_537883.1| putative DNA processing protein DprA [Rickettsia bellii RML369-C]
gi|91069072|gb|ABE04794.1| Putative DNA processing protein DprA [Rickettsia bellii RML369-C]
Length = 225
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L E G+ I+E+P G
Sbjct: 13 IAGGIDHIYPPENKKLFEN-LAEEGLIIAELPVG 45
>gi|157827244|ref|YP_001496308.1| putative DNA processing protein DprA [Rickettsia bellii OSU
85-389]
gi|157802548|gb|ABV79271.1| Putative DNA processing protein DprA [Rickettsia bellii OSU
85-389]
Length = 223
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L E G+ I+E+P G
Sbjct: 13 IAGGIDHIYPPENKKLFEN-LAEEGLIIAELPVG 45
>gi|313892683|ref|ZP_07826266.1| DNA protecting protein DprA [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442774|gb|EFR61183.1| DNA protecting protein DprA [Veillonella sp. oral taxon 158 str.
F0412]
Length = 408
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YP EN L + I N G+ +SE P G
Sbjct: 179 MGCGLDIVYPRENTKLFDRILQNNGLLLSEYPPG 212
>gi|13470875|ref|NP_102444.1| DNA processing chain A [Mesorhizobium loti MAFF303099]
gi|14021618|dbj|BAB48230.1| DNA processing chain A [Mesorhizobium loti MAFF303099]
Length = 377
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L EI G ISE+PFG
Sbjct: 175 LAGGLDLPYPPENAGLCAEI-AERGAVISEMPFG 207
>gi|110633709|ref|YP_673917.1| DNA protecting protein DprA [Mesorhizobium sp. BNC1]
gi|110284693|gb|ABG62752.1| DNA protecting protein DprA [Chelativorans sp. BNC1]
Length = 378
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPPEN L I G+ ++E+PFG
Sbjct: 176 LAGGLDRPYPPENDGLFRAI-GERGVVLTEMPFG 208
>gi|153815654|ref|ZP_01968322.1| hypothetical protein RUMTOR_01890 [Ruminococcus torques ATCC 27756]
gi|317502440|ref|ZP_07960604.1| smf family protein [Lachnospiraceae bacterium 8_1_57FAA]
gi|145847085|gb|EDK24003.1| hypothetical protein RUMTOR_01890 [Ruminococcus torques ATCC 27756]
gi|316896178|gb|EFV18285.1| smf family protein [Lachnospiraceae bacterium 8_1_57FAA]
Length = 357
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP E+ L +I + GG ISE+P G
Sbjct: 168 LGCGVDVCYPREHIGLYVDILEQGGGIISEMPPG 201
>gi|254562490|ref|YP_003069585.1| DNA protecting protein DprA [Methylobacterium extorquens DM4]
gi|254269768|emb|CAX25740.1| DNA protecting protein DprA [Methylobacterium extorquens DM4]
Length = 397
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L+EEI GG ++E+P G
Sbjct: 166 LAGGQDQIYPENHAGLVEEIVGAGGAVVAEMPMG 199
>gi|320108287|ref|YP_004183877.1| DNA protecting protein DprA [Terriglobus saanensis SP1PR4]
gi|319926808|gb|ADV83883.1| DNA protecting protein DprA [Terriglobus saanensis SP1PR4]
Length = 410
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L EEI GG +SE P G
Sbjct: 201 GIDVIYPKENKRLAEEILQGGGAIVSEYPLG 231
>gi|73666848|ref|YP_302864.1| SMF protein [Ehrlichia canis str. Jake]
gi|72393989|gb|AAZ68266.1| SMF protein [Ehrlichia canis str. Jake]
Length = 374
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MA G++ +YP EN +L + I D GG+ I+E PF
Sbjct: 174 MASGINIVYPQENTHLYKTIIDKGGLIITEFPF 206
>gi|58696725|ref|ZP_00372270.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
simulans]
gi|225630004|ref|YP_002726795.1| DNA processing chain A [Wolbachia sp. wRi]
gi|58537093|gb|EAL60213.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
simulans]
gi|225591985|gb|ACN95004.1| DNA processing chain A [Wolbachia sp. wRi]
Length = 362
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP EN +L ++I NGG+ I+E+PF
Sbjct: 164 ASGIDVVYPKENFDLYKKITGNGGLVITELPF 195
>gi|322436363|ref|YP_004218575.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX9]
gi|321164090|gb|ADW69795.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX9]
Length = 404
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN+ L EEI GG +SE P G
Sbjct: 187 GLDVVYPKENKRLAEEIVTGGGAIVSEYPLG 217
>gi|312897996|ref|ZP_07757405.1| DNA protecting protein DprA [Megasphaera micronuciformis F0359]
gi|310620921|gb|EFQ04472.1| DNA protecting protein DprA [Megasphaera micronuciformis F0359]
Length = 367
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YPPEN L I GG+ SE PFG
Sbjct: 179 GLDKTYPPENAALFRRIIGAGGVVCSEFPFG 209
>gi|305681197|ref|ZP_07404004.1| DNA protecting protein DprA [Corynebacterium matruchotii ATCC
14266]
gi|305659402|gb|EFM48902.1| DNA protecting protein DprA [Corynebacterium matruchotii ATCC
14266]
Length = 405
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP N ++L I + G +SE P G
Sbjct: 197 ACGLDRPYPRRNHDMLTTIAQHNGALVSEYPPG 229
>gi|225021105|ref|ZP_03710297.1| hypothetical protein CORMATOL_01117 [Corynebacterium matruchotii
ATCC 33806]
gi|224946105|gb|EEG27314.1| hypothetical protein CORMATOL_01117 [Corynebacterium matruchotii
ATCC 33806]
Length = 405
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP N ++L I + G +SE P G
Sbjct: 197 ACGLDRPYPRRNHDMLTTIAQHNGALVSEYPPG 229
>gi|58698108|ref|ZP_00373031.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535354|gb|EAL59430.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 346
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP EN +L ++I NGG+ I+E+PF
Sbjct: 148 ASGIDVVYPKENFDLYKKITGNGGLVITELPF 179
>gi|67458923|ref|YP_246547.1| putative DNA processing protein DprA [Rickettsia felis URRWXCal2]
gi|67004456|gb|AAY61382.1| Putatie DNA processing protein DprA [Rickettsia felis URRWXCal2]
Length = 382
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN+ L E G+ ++E+P G
Sbjct: 177 IAGGIDHIYPPENKKLFEN-LAEEGLILAELPIG 209
>gi|294791910|ref|ZP_06757058.1| DNA processing protein DprA [Veillonella sp. 6_1_27]
gi|294457140|gb|EFG25502.1| DNA processing protein DprA [Veillonella sp. 6_1_27]
Length = 408
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP EN L + I N G+ +SE P G
Sbjct: 179 MGCGLDITYPRENAKLFDRILQNNGLLLSEYPPG 212
>gi|42520001|ref|NP_965916.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42409738|gb|AAS13850.1| DNA processing chain A [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 362
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP EN +L ++I NGG+ I+E+PF
Sbjct: 164 ASGIDVVYPKENFDLYKKITGNGGLVITELPF 195
>gi|315648145|ref|ZP_07901246.1| DNA protecting protein DprA [Paenibacillus vortex V453]
gi|315276791|gb|EFU40134.1| DNA protecting protein DprA [Paenibacillus vortex V453]
Length = 391
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L EEI G+ ISE P G
Sbjct: 190 LGAGIDVIYPPENRSLYEEI-AAKGLVISEYPPG 222
>gi|68536255|ref|YP_250960.1| putative DNA processing protein [Corynebacterium jeikeium K411]
gi|260578955|ref|ZP_05846858.1| DNA processing protein [Corynebacterium jeikeium ATCC 43734]
gi|68263854|emb|CAI37342.1| putative DNA processing protein [Corynebacterium jeikeium K411]
gi|258602929|gb|EEW16203.1| DNA processing protein [Corynebacterium jeikeium ATCC 43734]
Length = 396
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA GLD YP + NL E+I +GG+ ISE P G
Sbjct: 198 MACGLDVSYPKAHANLFEQIVGSGGMLISEYPPG 231
>gi|225677140|ref|ZP_03788139.1| DNA processing chain A [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590807|gb|EEH12035.1| DNA processing chain A [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 362
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP EN +L ++I +NGG+ ++E+PF
Sbjct: 164 ASGIDVVYPKENFDLYKKITENGGLVVTELPF 195
>gi|83309780|ref|YP_420044.1| Rossmann fold nucleotide-binding protein [Magnetospirillum
magneticum AMB-1]
gi|82944621|dbj|BAE49485.1| Predicted Rossmann fold nucleotide-binding protein
[Magnetospirillum magneticum AMB-1]
Length = 383
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN +L EI G +SE+P G
Sbjct: 181 LAGGVDVVYPPENTDLWREI-GAAGAVVSEMPVG 213
>gi|329929328|ref|ZP_08283081.1| DNA protecting protein DprA [Paenibacillus sp. HGF5]
gi|328936697|gb|EGG33140.1| DNA protecting protein DprA [Paenibacillus sp. HGF5]
Length = 391
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L EEI G+ ISE P G
Sbjct: 190 LGAGIDVIYPPENRSLYEEI-AAKGLIISEYPPG 222
>gi|170742467|ref|YP_001771122.1| DNA protecting protein DprA [Methylobacterium sp. 4-46]
gi|168196741|gb|ACA18688.1| DNA protecting protein DprA [Methylobacterium sp. 4-46]
Length = 391
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ L I GG ++E+P G
Sbjct: 166 LAGGQDRIYPAEHEALAARILAQGGAIVAEMPLG 199
>gi|254474217|ref|ZP_05087608.1| DNA processing chain A [Pseudovibrio sp. JE062]
gi|211956747|gb|EEA91956.1| DNA processing chain A [Pseudovibrio sp. JE062]
Length = 397
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
AGG+D +YP EN L + G AISE+P
Sbjct: 182 AGGIDTVYPKENLELFSSMIATNGAAISEMPI 213
>gi|295982522|pdb|3MAJ|A Chain A, Crystal Structure Of Putative Dna Processing Protein Dpra
Fr Rhodopseudomonas Palustris Cga009
Length = 382
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL +I G AISE P G
Sbjct: 185 LAGGHDKIYPAEHEDLLLDIIQTRGAAISEXPLG 218
>gi|261407992|ref|YP_003244233.1| DNA protecting protein DprA [Paenibacillus sp. Y412MC10]
gi|261284455|gb|ACX66426.1| DNA protecting protein DprA [Paenibacillus sp. Y412MC10]
Length = 391
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L EEI G+ ISE P G
Sbjct: 190 LGAGIDVIYPPENRSLYEEI-AAKGLIISEYPPG 222
>gi|188582755|ref|YP_001926200.1| DNA protecting protein DprA [Methylobacterium populi BJ001]
gi|179346253|gb|ACB81665.1| DNA protecting protein DprA [Methylobacterium populi BJ001]
Length = 397
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP + L++ I D GG ++E+P G
Sbjct: 166 LAGGQDKIYPETHAGLVDAIVDAGGAVVAEMPMG 199
>gi|260427296|ref|ZP_05781275.1| protein smf [Citreicella sp. SE45]
gi|260421788|gb|EEX15039.1| protein smf [Citreicella sp. SE45]
Length = 398
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP EN L EEI GG +SE P G
Sbjct: 182 LAGGVDVLYPSENTRLAEEIRAQGGAVVSEQPIG 215
>gi|88657722|ref|YP_507678.1| putative DNA processing protein DprA [Ehrlichia chaffeensis str.
Arkansas]
gi|88599179|gb|ABD44648.1| putative DNA processing protein DprA [Ehrlichia chaffeensis str.
Arkansas]
Length = 375
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MA G++ +YP EN +L I D GG+ I+E PF
Sbjct: 174 MASGVNIVYPQENIHLYNTIVDKGGLIITEFPF 206
>gi|251772341|gb|EES52909.1| putative DNA processing protein DprA [Leptospirillum
ferrodiazotrophum]
Length = 292
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPPEN L EI GG+ +SE P G
Sbjct: 177 GLDRVYPPENVGLAREIERTGGLILSEYPPG 207
>gi|46200754|ref|ZP_00056433.2| COG0758: Predicted Rossmann fold nucleotide-binding protein
involved in DNA uptake [Magnetospirillum magnetotacticum
MS-1]
Length = 383
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN +L EI G +SE+P G
Sbjct: 181 LAGGVDVVYPPENTDLWREICA-AGTVVSEMPVG 213
>gi|89895301|ref|YP_518788.1| hypothetical protein DSY2555 [Desulfitobacterium hafniense Y51]
gi|219669735|ref|YP_002460170.1| DNA protecting protein DprA [Desulfitobacterium hafniense DCB-2]
gi|89334749|dbj|BAE84344.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539995|gb|ACL21734.1| DNA protecting protein DprA [Desulfitobacterium hafniense DCB-2]
Length = 389
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GL+ +YPPEN+ L EEI GG SE P G
Sbjct: 182 MGCGLNHMYPPENQKLAEEILAKGGALWSEFPPG 215
>gi|313895732|ref|ZP_07829288.1| DNA protecting protein DprA [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320528987|ref|ZP_08030079.1| DNA protecting protein DprA [Selenomonas artemidis F0399]
gi|312975858|gb|EFR41317.1| DNA protecting protein DprA [Selenomonas sp. oral taxon 137 str.
F0430]
gi|320138617|gb|EFW30507.1| DNA protecting protein DprA [Selenomonas artemidis F0399]
Length = 363
Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPPENR L+ +I D GG +SE G
Sbjct: 172 LGCGVDIAYPPENRRLIAQIIDAGGAVLSEYAPG 205
>gi|259046716|ref|ZP_05737117.1| DNA processing chain A [Granulicatella adiacens ATCC 49175]
gi|259036612|gb|EEW37867.1| DNA processing chain A [Granulicatella adiacens ATCC 49175]
Length = 288
Score = 44.8 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPEN NL +EI G+ ISE P G
Sbjct: 169 IGSGLDVVYPPENANLYKEI-GEKGLIISEYPLG 201
>gi|241667272|ref|ZP_04754850.1| DNA processing protein DprA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875823|ref|ZP_05248533.1| DNA processing protein dprA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841844|gb|EET20258.1| DNA processing protein dprA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 366
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L I N G+ ISE+P G
Sbjct: 175 GVDIIYPSSNRELYSNIISNNGLIISELPLG 205
>gi|255526680|ref|ZP_05393584.1| DNA protecting protein DprA [Clostridium carboxidivorans P7]
gi|296185600|ref|ZP_06854009.1| DNA protecting protein DprA [Clostridium carboxidivorans P7]
gi|255509612|gb|EET85948.1| DNA protecting protein DprA [Clostridium carboxidivorans P7]
gi|296049728|gb|EFG89153.1| DNA protecting protein DprA [Clostridium carboxidivorans P7]
Length = 364
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YP E+ L+EEI G ISE P G
Sbjct: 171 LGGGVDKVYPKEHIKLMEEIIA-KGAVISEYPPG 203
>gi|164687263|ref|ZP_02211291.1| hypothetical protein CLOBAR_00904 [Clostridium bartlettii DSM
16795]
gi|164603687|gb|EDQ97152.1| hypothetical protein CLOBAR_00904 [Clostridium bartlettii DSM
16795]
Length = 304
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD YPPEN +L +EI +N G ISE G
Sbjct: 175 LPCGLDKYYPPENCDLGDEILENEGCLISEYKIG 208
>gi|320535372|ref|ZP_08035486.1| DNA protecting protein DprA [Treponema phagedenis F0421]
gi|320147774|gb|EFW39276.1| DNA protecting protein DprA [Treponema phagedenis F0421]
Length = 317
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP N L +I + GG +SE P G
Sbjct: 177 LACGVDRIYPRSNARLAAKIIETGGCILSEYPPG 210
>gi|292670827|ref|ZP_06604253.1| DNA protecting protein DprA [Selenomonas noxia ATCC 43541]
gi|292647448|gb|EFF65420.1| DNA protecting protein DprA [Selenomonas noxia ATCC 43541]
Length = 363
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPPENR LL +I ++GG +SE G
Sbjct: 172 LGCGVDIAYPPENRRLLSQIVESGGAVLSEYAPG 205
>gi|256827137|ref|YP_003151096.1| DNA protecting protein DprA [Cryptobacterium curtum DSM 15641]
gi|256583280|gb|ACU94414.1| DNA protecting protein DprA [Cryptobacterium curtum DSM 15641]
Length = 328
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GG D YPP + L +EI +NGG +SE
Sbjct: 124 LGGGCDQPYPPSHVPLFQEIINNGGAIVSE 153
>gi|254796757|ref|YP_003081593.1| DNA processing chain A [Neorickettsia risticii str. Illinois]
gi|254590002|gb|ACT69364.1| DNA processing chain A [Neorickettsia risticii str. Illinois]
Length = 375
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YP EN+ L E I + GG+ ++E+PFG
Sbjct: 170 GIDQCYPTENQKLQERIIERGGLVVTEVPFG 200
>gi|114799220|ref|YP_760845.1| DNA protecting protein DprA [Hyphomonas neptunium ATCC 15444]
gi|114739394|gb|ABI77519.1| DNA protecting protein DprA [Hyphomonas neptunium ATCC 15444]
Length = 371
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YPP++ L E+ G+ +SE+PFG
Sbjct: 172 LGGGIDHVYPPKHDRLYAEV-AQQGLIVSEMPFG 204
>gi|269798030|ref|YP_003311930.1| DNA protecting protein DprA [Veillonella parvula DSM 2008]
gi|269094659|gb|ACZ24650.1| DNA protecting protein DprA [Veillonella parvula DSM 2008]
Length = 408
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP EN L + + N G+ +SE P G
Sbjct: 179 MGCGLDITYPRENAKLFDRMLQNNGLLLSEYPPG 212
>gi|167626698|ref|YP_001677198.1| DNA processing protein DprA [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596699|gb|ABZ86697.1| DNA processing protein DprA [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 288
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L I N G+ ISE+P G
Sbjct: 97 GVDIIYPSSNRELYSNIISNNGLIISELPLG 127
>gi|294793770|ref|ZP_06758907.1| DNA processing protein DprA [Veillonella sp. 3_1_44]
gi|294455340|gb|EFG23712.1| DNA processing protein DprA [Veillonella sp. 3_1_44]
Length = 408
Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP EN L + + N G+ +SE P G
Sbjct: 179 MGCGLDITYPRENAKLFDRMLQNNGLLLSEYPPG 212
>gi|75676200|ref|YP_318621.1| SMF protein [Nitrobacter winogradskyi Nb-255]
gi|74421070|gb|ABA05269.1| SMF protein [Nitrobacter winogradskyi Nb-255]
Length = 372
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL + ++GG AISE+P G
Sbjct: 175 LAGGHDRIYPLEHEDLLAAVLESGG-AISEMPMG 207
>gi|329114375|ref|ZP_08243137.1| Protein Smf [Acetobacter pomorum DM001]
gi|326696451|gb|EGE48130.1| Protein Smf [Acetobacter pomorum DM001]
Length = 412
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPEN +L EI G ++E P G
Sbjct: 164 IAGGLDCPYPPENASLQAEI-AQKGAVVTEAPLG 196
>gi|304436896|ref|ZP_07396860.1| DNA processing protein DprA [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370095|gb|EFM23756.1| DNA processing protein DprA [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 363
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPPENR LL EI G +SE G
Sbjct: 172 LGCGVDIAYPPENRRLLTEIVAADGAVLSEYAPG 205
>gi|258541853|ref|YP_003187286.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-01]
gi|256632931|dbj|BAH98906.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-01]
gi|256635988|dbj|BAI01957.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-03]
gi|256639043|dbj|BAI05005.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-07]
gi|256642097|dbj|BAI08052.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-22]
gi|256645152|dbj|BAI11100.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-26]
gi|256648207|dbj|BAI14148.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-32]
gi|256651260|dbj|BAI17194.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654251|dbj|BAI20178.1| DNA processing chain A SMF [Acetobacter pasteurianus IFO 3283-12]
Length = 208
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPEN +L EI G ++E P G
Sbjct: 164 IAGGLDCPYPPENASLQAEI-AQKGAVVTEAPLG 196
>gi|190571736|ref|YP_001976094.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019224|ref|ZP_03335031.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190358008|emb|CAQ55476.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995333|gb|EEB55974.1| DNA processing chain A [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 361
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP EN +L ++I +NGG+ ++E+PF
Sbjct: 163 ASGIDVVYPRENFDLYKKITENGGLVMTELPF 194
>gi|88606798|ref|YP_505506.1| putative DNA processing protein DprA [Anaplasma phagocytophilum HZ]
gi|88597861|gb|ABD43331.1| putative DNA processing protein DprA [Anaplasma phagocytophilum HZ]
Length = 344
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+A G++ +YP EN L + I GG+ ISE+PF
Sbjct: 143 IANGINVIYPRENAKLYKSIVREGGLLISELPF 175
>gi|296445900|ref|ZP_06887851.1| DNA protecting protein DprA [Methylosinus trichosporium OB3b]
gi|296256568|gb|EFH03644.1| DNA protecting protein DprA [Methylosinus trichosporium OB3b]
Length = 412
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGG YP E+ L+ EI GG +SE+P
Sbjct: 175 LAGGHARPYPSEHAPLIAEIAARGGAVLSEMPI 207
>gi|282850258|ref|ZP_06259637.1| DNA protecting protein DprA [Veillonella parvula ATCC 17745]
gi|282579751|gb|EFB85155.1| DNA protecting protein DprA [Veillonella parvula ATCC 17745]
Length = 408
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP EN L + + N G+ +SE P G
Sbjct: 179 MGCGLDITYPRENAKLFDRMLQNNGLLLSEYPPG 212
>gi|225163857|ref|ZP_03726152.1| DNA protecting protein DprA [Opitutaceae bacterium TAV2]
gi|224801538|gb|EEG19839.1| DNA protecting protein DprA [Opitutaceae bacterium TAV2]
Length = 388
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D +YPPEN +L I + GG SE PF
Sbjct: 173 LGTGIDIIYPPENLDLYRRIENEGGAICSEFPF 205
>gi|317488107|ref|ZP_07946684.1| DNA protecting protein DprA [Eggerthella sp. 1_3_56FAA]
gi|316912815|gb|EFV34347.1| DNA protecting protein DprA [Eggerthella sp. 1_3_56FAA]
Length = 227
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GG D LYP E+ L + I D GG +SE
Sbjct: 24 LGGGCDRLYPAEHEGLFQRIVDGGGAVVSE 53
>gi|299138372|ref|ZP_07031551.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX8]
gi|298599618|gb|EFI55777.1| DNA protecting protein DprA [Acidobacterium sp. MP5ACTX8]
Length = 403
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L E+I GG ISE P G
Sbjct: 180 GIDVIYPKENKKLAEQIVQQGGALISEFPMG 210
>gi|164686892|ref|ZP_02210920.1| hypothetical protein CLOBAR_00488 [Clostridium bartlettii DSM
16795]
gi|164604282|gb|EDQ97747.1| hypothetical protein CLOBAR_00488 [Clostridium bartlettii DSM
16795]
Length = 329
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
M GLD +YP N +L + I +N G ISE P
Sbjct: 178 MPCGLDMVYPNNNCDLFKRIINNNGCVISEYPP 210
>gi|294055361|ref|YP_003549019.1| DNA protecting protein DprA [Coraliomargarita akajimensis DSM
45221]
gi|293614694|gb|ADE54849.1| DNA protecting protein DprA [Coraliomargarita akajimensis DSM
45221]
Length = 373
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YPPEN +L I G +SE PFG
Sbjct: 178 CGLDIVYPPENLDLYRAIVA-KGAVVSEFPFG 208
>gi|182680321|ref|YP_001834467.1| DNA protecting protein DprA [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636204|gb|ACB96978.1| DNA protecting protein DprA [Beijerinckia indica subsp. indica ATCC
9039]
Length = 429
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGL +YP E+ LLE + G AISE+PF
Sbjct: 177 LAGGLGRIYPAEHAPLLERLL-GEGAAISEMPF 208
>gi|296117478|ref|ZP_06836065.1| putative DNA processing chain A [Gluconacetobacter hansenii ATCC
23769]
gi|295975999|gb|EFG82790.1| putative DNA processing chain A [Gluconacetobacter hansenii ATCC
23769]
Length = 375
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPE+ L +EI G I+E P G
Sbjct: 164 IAGGLDCPYPPEHGRLHDEI-AQQGALITEAPPG 196
>gi|90417726|ref|ZP_01225638.1| DNA processing protein DprA, putative [Aurantimonas manganoxydans
SI85-9A1]
gi|90337398|gb|EAS51049.1| DNA processing protein DprA, putative [Aurantimonas manganoxydans
SI85-9A1]
Length = 376
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGLD YP ENR L+ I D GG +SE FG
Sbjct: 177 AGGLDRPYPDENRPLMRRIVDEGGCLLSERAFG 209
>gi|269795658|ref|YP_003315113.1| DNA protecting protein DprA [Sanguibacter keddieii DSM 10542]
gi|269097843|gb|ACZ22279.1| DNA protecting protein DprA [Sanguibacter keddieii DSM 10542]
Length = 399
Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D LYP N +LL + D G+ +SE+P G
Sbjct: 192 LAGGPDRLYPAGNADLLRGVLDGAGLVLSELPPG 225
>gi|88608661|ref|YP_506277.1| putative DNA processing protein DprA [Neorickettsia sennetsu str.
Miyayama]
gi|88600830|gb|ABD46298.1| putative DNA processing protein DprA [Neorickettsia sennetsu str.
Miyayama]
Length = 378
Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YP EN+ L E I + GG+ ++E+PFG
Sbjct: 170 GIDQCYPIENQRLQERIIERGGLVVTEVPFG 200
>gi|126729116|ref|ZP_01744930.1| DNA processing protein DprA, putative [Sagittula stellata E-37]
gi|126710106|gb|EBA09158.1| DNA processing protein DprA, putative [Sagittula stellata E-37]
Length = 372
Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP EN L ++I G ISE P G
Sbjct: 159 LAGGVDVLYPAENAGLADDIVTCHGARISEQPMG 192
>gi|188996508|ref|YP_001930759.1| DNA protecting protein DprA [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931575|gb|ACD66205.1| DNA protecting protein DprA [Sulfurihydrogenibium sp. YO3AOP1]
Length = 356
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L EEI G ISE PFG
Sbjct: 171 LGNGIDIVYPYENKKLYEEI-SEKGCIISEFPFG 203
>gi|237755691|ref|ZP_04584300.1| DNA protecting protein DprA [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692141|gb|EEP61140.1| DNA protecting protein DprA [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 356
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L EEI G ISE PFG
Sbjct: 171 LGNGIDIVYPYENKKLYEEI-SEKGCIISEFPFG 203
>gi|332981422|ref|YP_004462863.1| DNA protecting protein DprA [Mahella australiensis 50-1 BON]
gi|332699100|gb|AEE96041.1| DNA protecting protein DprA [Mahella australiensis 50-1 BON]
Length = 366
Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPE++ L +I + G ISE P G
Sbjct: 175 LGCGVDMIYPPEHKPLYYDIISH-GAVISEFPPG 207
>gi|85859218|ref|YP_461420.1| SMF family protein involved in DNA uptake [Syntrophus
aciditrophicus SB]
gi|85722309|gb|ABC77252.1| SMF family protein involved in DNA uptake [Syntrophus
aciditrophicus SB]
Length = 394
Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPEN+NL E+I G ISE+ G
Sbjct: 173 LGCGLDIVYPPENKNLYEKI-AADGAVISELALG 205
>gi|85716403|ref|ZP_01047375.1| SMF protein [Nitrobacter sp. Nb-311A]
gi|85696760|gb|EAQ34646.1| SMF protein [Nitrobacter sp. Nb-311A]
Length = 372
Score = 42.8 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP E+ +LL + ++GG AISE+P G
Sbjct: 175 LAGGHDRIYPLEHEDLLAAVLEDGG-AISEMPMG 207
>gi|189183183|ref|YP_001936968.1| DNA processing protein Smf [Orientia tsutsugamushi str. Ikeda]
gi|189179954|dbj|BAG39734.1| DNA processing protein Smf [Orientia tsutsugamushi str. Ikeda]
Length = 386
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGG+D +YP EN NL +I N G+ ++E+P
Sbjct: 177 IAGGVDHIYPQENINLYHKI-ANEGLILAELPI 208
>gi|208780407|ref|ZP_03247748.1| DNA protecting protein DprA, putative [Francisella novicida FTG]
gi|208743775|gb|EDZ90078.1| DNA protecting protein DprA, putative [Francisella novicida FTG]
Length = 368
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE+P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISELPLG 207
>gi|150005910|ref|YP_001300654.1| putative DNA processing enzyme DprA [Bacteroides vulgatus ATCC
8482]
gi|149934334|gb|ABR41032.1| putative DNA processing enzyme DprA [Bacteroides vulgatus ATCC
8482]
Length = 326
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 1 MAGGLD--CLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN +L +EI NGG+ +SE P G
Sbjct: 180 LANGLDWASIYPKENLSLAKEIVSNGGLLLSEYPVG 215
>gi|167630278|ref|YP_001680777.1| DNA processing protein dpra, putative [Heliobacterium modesticaldum
Ice1]
gi|167593018|gb|ABZ84766.1| DNA processing protein dpra, putative [Heliobacterium modesticaldum
Ice1]
Length = 378
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPE+ L I + G +SE P G
Sbjct: 179 LAGGVDVIYPPEHGKLASRIVEQ-GALVSEYPPG 211
>gi|257063753|ref|YP_003143425.1| DNA protecting protein DprA [Slackia heliotrinireducens DSM 20476]
gi|256791406|gb|ACV22076.1| DNA protecting protein DprA [Slackia heliotrinireducens DSM 20476]
Length = 319
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ GG D YP EN +L +++ D GG +SE P
Sbjct: 109 LGGGCDMPYPVENFDLFQQVVDAGGAVVSEHP 140
>gi|170746908|ref|YP_001753168.1| DNA protecting protein DprA [Methylobacterium radiotolerans JCM
2831]
gi|170653430|gb|ACB22485.1| DNA protecting protein DprA [Methylobacterium radiotolerans JCM
2831]
Length = 403
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG D +YP + L+E I GG ++E+P G
Sbjct: 165 MAGGQDRIYPASHAALVEAILAEGGAVLAEMPMG 198
>gi|148284625|ref|YP_001248715.1| DNA processing protein [Orientia tsutsugamushi str. Boryong]
gi|146740064|emb|CAM80189.1| DNA processing protein [Orientia tsutsugamushi str. Boryong]
Length = 386
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGG+D +YP EN NL +I N G+ ++E+P
Sbjct: 177 IAGGVDHIYPQENINLYHKI-ANEGLILAELPI 208
>gi|197303737|ref|ZP_03168774.1| hypothetical protein RUMLAC_02466 [Ruminococcus lactaris ATCC
29176]
gi|197297257|gb|EDY31820.1| hypothetical protein RUMLAC_02466 [Ruminococcus lactaris ATCC
29176]
Length = 366
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP E+ L +I + GG +SE P G
Sbjct: 172 LGCGVDICYPREHIGLYMDILEQGGGILSEFPPG 205
>gi|254294345|ref|YP_003060368.1| DNA protecting protein DprA [Hirschia baltica ATCC 49814]
gi|254042876|gb|ACT59671.1| DNA protecting protein DprA [Hirschia baltica ATCC 49814]
Length = 373
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPE+ L + I + G +SE P G
Sbjct: 175 LAGGVDAIYPPEHAKLYDAILER-GAIVSESPLG 207
>gi|114327469|ref|YP_744626.1| DNA processing protein [Granulibacter bethesdensis CGDNIH1]
gi|114315643|gb|ABI61703.1| DNA processing protein [Granulibacter bethesdensis CGDNIH1]
Length = 378
Score = 42.5 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YP EN L + + G ISE+P G
Sbjct: 163 VAGGLDCPYPRENIRL-QSVIAKRGAVISELPLG 195
>gi|225874954|ref|YP_002756413.1| DNA protecting protein DprA [Acidobacterium capsulatum ATCC 51196]
gi|225792046|gb|ACO32136.1| DNA protecting protein DprA [Acidobacterium capsulatum ATCC 51196]
Length = 401
Score = 42.5 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L E+I GG +SE+P G
Sbjct: 192 GVDVIYPKENKALAEQIVATGGAIVSELPLG 222
>gi|296129327|ref|YP_003636577.1| DNA protecting protein DprA [Cellulomonas flavigena DSM 20109]
gi|296021142|gb|ADG74378.1| DNA protecting protein DprA [Cellulomonas flavigena DSM 20109]
Length = 402
Score = 42.5 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP N LLEE+ GG SE+P G
Sbjct: 203 LAGGVDRAYPAGNARLLEEVVRAGGSLFSEVPPG 236
>gi|257791160|ref|YP_003181766.1| DNA protecting protein DprA [Eggerthella lenta DSM 2243]
gi|325832903|ref|ZP_08165576.1| DNA protecting protein DprA [Eggerthella sp. HGA1]
gi|257475057|gb|ACV55377.1| DNA protecting protein DprA [Eggerthella lenta DSM 2243]
gi|325485768|gb|EGC88232.1| DNA protecting protein DprA [Eggerthella sp. HGA1]
Length = 305
Score = 42.5 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GG D LYP E+ L + I D GG +SE
Sbjct: 102 LGGGCDRLYPAEHEGLFQRIVDEGGAVVSE 131
>gi|240145514|ref|ZP_04744115.1| DNA processing protein DprA [Roseburia intestinalis L1-82]
gi|257202330|gb|EEV00615.1| DNA processing protein DprA [Roseburia intestinalis L1-82]
Length = 361
Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP N + +EI + G ISE P G
Sbjct: 170 LGCGVDICYPKSNSRIYQEILEKNGAIISEYPPG 203
>gi|328675504|gb|AEB28179.1| Rossmann fold nucleotide-binding protein Smf possibly involved in
DNA uptake [Francisella cf. novicida 3523]
Length = 368
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N+ L +I + G+ +SE P G
Sbjct: 177 GIDVVYPSSNKELYNKIINTNGLIVSEFPLG 207
>gi|167009201|ref|ZP_02274132.1| DNA processing protein DprA [Francisella tularensis subsp.
holarctica FSC200]
gi|254367122|ref|ZP_04983155.1| DNA uptake protein, SMF family [Francisella tularensis subsp.
holarctica 257]
gi|134252945|gb|EBA52039.1| DNA uptake protein, SMF family [Francisella tularensis subsp.
holarctica 257]
Length = 245
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 77 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 107
>gi|308176205|ref|YP_003915611.1| smf family protein [Arthrobacter arilaitensis Re117]
gi|307743668|emb|CBT74640.1| putative smf family protein [Arthrobacter arilaitensis Re117]
Length = 333
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL I D G+ +SE+P G
Sbjct: 186 LAGGVDRPYPAGHSELLGRIADT-GLVVSEMPPG 218
>gi|254372325|ref|ZP_04987816.1| DNA uptake protein [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570054|gb|EDN35708.1| DNA uptake protein [Francisella novicida GA99-3549]
Length = 368
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|328676429|gb|AEB27299.1| Rossmann fold nucleotide-binding protein Smf possibly involved in
DNA uptake [Francisella cf. novicida Fx1]
Length = 368
Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|134302268|ref|YP_001122237.1| DNA processing protein DprA [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050045|gb|ABO47116.1| DNA processing protein DprA [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 368
Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|118496955|ref|YP_898005.1| SMF family DNA uptake protein [Francisella tularensis subsp.
novicida U112]
gi|194324184|ref|ZP_03057958.1| DNA protecting protein DprA, putative [Francisella tularensis
subsp. novicida FTE]
gi|118422861|gb|ABK89251.1| DNA uptake protein, SMF family [Francisella novicida U112]
gi|194321631|gb|EDX19115.1| DNA protecting protein DprA, putative [Francisella tularensis
subsp. novicida FTE]
Length = 368
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|291533226|emb|CBL06339.1| DNA protecting protein DprA [Megamonas hypermegale ART12/1]
Length = 368
Score = 42.1 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GLD +YP EN+ LLE I G ISE P
Sbjct: 169 LGCGLDIIYPKENKQLLEAI-AQNGAVISEYPL 200
>gi|325294278|ref|YP_004280792.1| DNA protecting protein DprA [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325064726|gb|ADY72733.1| DNA protecting protein DprA [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 337
Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N +L E I D GG ISE P G
Sbjct: 154 LGSGVDSIYPRGNFSLAERIVDTGGAIISEFPLG 187
>gi|298372209|ref|ZP_06982199.1| DNA processing protein DprA [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275113|gb|EFI16664.1| DNA processing protein DprA [Bacteroidetes oral taxon 274 str.
F0058]
Length = 363
Score = 42.1 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+A GLD +YP +++ L I GG I+E P
Sbjct: 173 VAHGLDRVYPAQHKGLAASIVQQGGAIITEYP 204
>gi|253700153|ref|YP_003021342.1| DNA protecting protein DprA [Geobacter sp. M21]
gi|251775003|gb|ACT17584.1| DNA protecting protein DprA [Geobacter sp. M21]
Length = 359
Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN L + + DN G ISE P G
Sbjct: 170 LGCGIDLVYPPENGALYQALADN-GALISEFPMG 202
>gi|260752380|ref|YP_003225273.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258551743|gb|ACV74689.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 385
Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGLD YPPEN+ L + I G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAI-SEKGLVVSEMPP 204
>gi|254373799|ref|ZP_04989282.1| DNA processing protein DprA [Francisella novicida GA99-3548]
gi|151571520|gb|EDN37174.1| DNA processing protein DprA [Francisella novicida GA99-3548]
Length = 368
Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|110832994|ref|YP_691853.1| peptide deformylase, DNA processing protein [Alcanivorax
borkumensis SK2]
gi|110646105|emb|CAL15581.1| peptide deformylase, DNA processing protein [Alcanivorax
borkumensis SK2]
Length = 353
Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G D +YPP N +L EEI D GG +SE G
Sbjct: 165 MGNGPDRIYPPRNGSLAEEIVDTGGALVSEFAPG 198
>gi|154247839|ref|YP_001418797.1| DNA protecting protein DprA [Xanthobacter autotrophicus Py2]
gi|154161924|gb|ABS69140.1| DNA protecting protein DprA [Xanthobacter autotrophicus Py2]
Length = 378
Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
AGGL YPPEN L+E++ G +SE+P
Sbjct: 183 AGGLARPYPPENLGLIEKV-AATGAIVSEMPL 213
>gi|255659254|ref|ZP_05404663.1| DNA processing protein DprA [Mitsuokella multacida DSM 20544]
gi|260848709|gb|EEX68716.1| DNA processing protein DprA [Mitsuokella multacida DSM 20544]
Length = 365
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP ENR LL EI ++GG ISE G
Sbjct: 174 LGCGIDVAYPAENRRLLMEIAESGGAVISEYGPG 207
>gi|90019672|ref|YP_525499.1| filamentous hemagglutinin-like protein [Saccharophagus degradans
2-40]
gi|89949272|gb|ABD79287.1| DNA processing protein DprA, putative [Saccharophagus degradans
2-40]
Length = 399
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N L EI NGG +SE P G
Sbjct: 200 GIDSVYPQRNSALASEIIANGGAIVSEFPLG 230
>gi|241762041|ref|ZP_04760125.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373507|gb|EER63094.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 385
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGLD YPPEN+ L + I G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAI-SEKGLVVSEMPP 204
>gi|290954217|ref|ZP_06558838.1| DNA processing protein DprA [Francisella tularensis subsp.
holarctica URFT1]
gi|295312381|ref|ZP_06803163.1| DNA processing protein DprA [Francisella tularensis subsp.
holarctica URFT1]
Length = 268
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 77 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 107
>gi|56552090|ref|YP_162929.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543664|gb|AAV89818.1| DNA protecting protein DprA [Zymomonas mobilis subsp. mobilis ZM4]
Length = 385
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGLD YPPEN+ L + I G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAI-SEKGLVVSEMPP 204
>gi|254370428|ref|ZP_04986433.1| predicted protein [Francisella tularensis subsp. tularensis FSC033]
gi|151568671|gb|EDN34325.1| predicted protein [Francisella tularensis subsp. tularensis FSC033]
Length = 228
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP NR L +I + G+ ISE P G
Sbjct: 177 GVDVVYPSSNRELYNKIINTNGLIISEFPLG 207
>gi|118578968|ref|YP_900218.1| DNA protecting protein DprA [Pelobacter propionicus DSM 2379]
gi|118501678|gb|ABK98160.1| DNA protecting protein DprA [Pelobacter propionicus DSM 2379]
Length = 371
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR+L +E+ G +SE P G
Sbjct: 177 LGCGIDRIYPPENRDLFDEM-AERGCLVSEFPLG 209
>gi|332637402|ref|ZP_08416265.1| putative DNA processing enzyme DprA [Weissella cibaria KACC 11862]
Length = 341
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MAGGLDCL-YPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP +NR L E+I GG +SE P G
Sbjct: 180 LAAGLDEPVYPAKNRELAEKILTEGGALVSEYPAG 214
>gi|325297496|ref|YP_004257413.1| SMF family protein [Bacteroides salanitronis DSM 18170]
gi|324317049|gb|ADY34940.1| SMF family protein [Bacteroides salanitronis DSM 18170]
Length = 343
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +P N+ L EEI GG +SE PFG
Sbjct: 199 VASGLDITHPKVNKTLQEEIVAKGGTIVSEHPFG 232
>gi|4511994|gb|AAD21554.1| DNA processing chain A [Zymomonas mobilis subsp. mobilis ZM4]
Length = 385
Score = 41.7 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGLD YPPEN+ L + I G+ +SE+P
Sbjct: 173 IAGGLDSFYPPENKELQQAI-SEKGLVVSEMPP 204
>gi|238926948|ref|ZP_04658708.1| SMF family DNA processing protein [Selenomonas flueggei ATCC 43531]
gi|238885182|gb|EEQ48820.1| SMF family DNA processing protein [Selenomonas flueggei ATCC 43531]
Length = 369
Score = 41.7 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP ENR LL EI +GG +SE G
Sbjct: 178 LGCGVDVAYPSENRRLLAEICTSGGAVLSEYAPG 211
>gi|149925346|ref|ZP_01913610.1| SMF protein [Limnobacter sp. MED105]
gi|149825463|gb|EDM84671.1| SMF protein [Limnobacter sp. MED105]
Length = 362
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D +YPP + L +I GG+ +SE P G
Sbjct: 152 LGCGPDEIYPPHHAGLKAQIVGQGGLVLSEYPPG 185
>gi|294678614|ref|YP_003579229.1| DNA protecting protein DprA [Rhodobacter capsulatus SB 1003]
gi|294477434|gb|ADE86822.1| DNA protecting protein DprA [Rhodobacter capsulatus SB 1003]
Length = 383
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD +YPPENR+L I GG+ ++E+P G
Sbjct: 180 MAGGLDVIYPPENRDLASRIAT-GGLLLAELPPG 212
>gi|56416598|ref|YP_153672.1| DNA processing protein, chain A [Anaplasma marginale str. St.
Maries]
gi|222474964|ref|YP_002563379.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Florida]
gi|56387830|gb|AAV86417.1| DNA processing protein, chain A [Anaplasma marginale str. St.
Maries]
gi|222419100|gb|ACM49123.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Florida]
Length = 377
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP +N +L I NGG+ ++E+PF
Sbjct: 176 ASGIDVVYPKDNLHLYRAIVHNGGVVVTELPF 207
>gi|325262840|ref|ZP_08129576.1| DNA processing protein DprA [Clostridium sp. D5]
gi|324031934|gb|EGB93213.1| DNA processing protein DprA [Clostridium sp. D5]
Length = 360
Score = 41.7 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G++ YP E+ L +I +NGG +SE P G
Sbjct: 169 LGCGVNICYPREHIGLYADILENGGGILSEFPPG 202
>gi|157413603|ref|YP_001484469.1| DNA uptake Rossmann fold nucleotide-binding protein
[Prochlorococcus marinus str. MIT 9215]
gi|157388178|gb|ABV50883.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Prochlorococcus marinus str. MIT 9215]
Length = 311
Score = 41.7 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN NL EI D GG +SE G
Sbjct: 169 LPNGLDEIYPKENANLASEIIDYGGCLVSEYLIG 202
>gi|269958987|ref|YP_003328776.1| putativeDNA recombination-mediator protein A [Anaplasma centrale
str. Israel]
gi|269848818|gb|ACZ49462.1| putativeDNA recombination-mediator protein A [Anaplasma centrale
str. Israel]
Length = 378
Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP +N +L I NGG+ ++E+PF
Sbjct: 176 ANGIDVVYPKDNLHLYRAIVHNGGVVVTELPF 207
>gi|169824494|ref|YP_001692105.1| putative Smf protein DNA processing subunit A [Finegoldia magna
ATCC 29328]
gi|303233675|ref|ZP_07320329.1| DNA protecting protein DprA [Finegoldia magna BVS033A4]
gi|167831299|dbj|BAG08215.1| putative Smf protein DNA processing subunit A [Finegoldia magna
ATCC 29328]
gi|302495109|gb|EFL54861.1| DNA protecting protein DprA [Finegoldia magna BVS033A4]
Length = 356
Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MAGGLDCLYPPENRNLLEE-IWDNGGIAISEIPFG 34
+ G+D +YP N + +E I + G+ +SE PFG
Sbjct: 167 LGCGIDQVYPQSNYRVFQEMISSHNGVIMSEYPFG 201
>gi|302380488|ref|ZP_07268953.1| DNA protecting protein DprA [Finegoldia magna ACS-171-V-Col3]
gi|302311431|gb|EFK93447.1| DNA protecting protein DprA [Finegoldia magna ACS-171-V-Col3]
Length = 290
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MAGGLDCLYPPENRNLLEE-IWDNGGIAISEIPFG 34
+ G+D +YP N + +E I + G+ +SE PFG
Sbjct: 101 LGCGIDQVYPQSNYRVFQEMISSHNGVIMSEYPFG 135
>gi|332653525|ref|ZP_08419270.1| DNA processing protein DprA [Ruminococcaceae bacterium D16]
gi|332518671|gb|EGJ48274.1| DNA processing protein DprA [Ruminococcaceae bacterium D16]
Length = 410
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP ENR L +++ G ISE P G
Sbjct: 172 LAGGVDVPYPKENRFLYQDV-AAVGALISEYPPG 204
>gi|169830783|ref|YP_001716765.1| DNA protecting protein DprA [Candidatus Desulforudis audaxviator
MP104C]
gi|169637627|gb|ACA59133.1| DNA protecting protein DprA [Candidatus Desulforudis audaxviator
MP104C]
Length = 394
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN L+E+I +GG+ ++E P G
Sbjct: 195 LGSGLDVVYPRENAGLMEKIAASGGLVLTEFPLG 228
>gi|19553232|ref|NP_601234.1| Rossmann-fold nucleotide-binding protein [Corynebacterium
glutamicum ATCC 13032]
gi|62390868|ref|YP_226270.1| DNA uptake Rossmann fold nucleotide-binding protein
[Corynebacterium glutamicum ATCC 13032]
gi|21324799|dbj|BAB99422.1| Predicted Rossmann-fold nucleotide-binding protein involved in DNA
uptake [Corynebacterium glutamicum ATCC 13032]
gi|41326207|emb|CAF20369.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Corynebacterium glutamicum ATCC 13032]
Length = 394
Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 2 AGGLDCLYPPENRNLLEEIW-DNGGIAISEIPFG 34
A GLD YP NR+L +I G +SE P G
Sbjct: 192 ACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPG 225
>gi|145295932|ref|YP_001138753.1| hypothetical protein cgR_1857 [Corynebacterium glutamicum R]
gi|140845852|dbj|BAF54851.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 394
Score = 41.3 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 2 AGGLDCLYPPENRNLLEEIW-DNGGIAISEIPFG 34
A GLD YP NR+L +I G +SE P G
Sbjct: 192 ACGLDRSYPSHNRDLFNQIAKSGKGALVSEYPPG 225
>gi|255002940|ref|ZP_05277904.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Puerto Rico]
gi|255004065|ref|ZP_05278866.1| DNA processing protein, chain A dprA (smf) [Anaplasma marginale
str. Virginia]
Length = 354
Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A G+D +YP +N +L I NGG+ ++E+PF
Sbjct: 153 ASGIDVVYPKDNLHLYRAIVHNGGVVVTELPF 184
>gi|298291505|ref|YP_003693444.1| DNA protecting protein DprA [Starkeya novella DSM 506]
gi|296928016|gb|ADH88825.1| DNA protecting protein DprA [Starkeya novella DSM 506]
Length = 369
Score = 41.3 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D YP EN L+E I G +SE+P G
Sbjct: 173 IAGGHDRPYPRENEKLMEAI-AAEGAILSEMPMG 205
>gi|255689876|ref|ZP_05413551.1| putative DNA processing protein DprA [Bacteroides finegoldii DSM
17565]
gi|260624481|gb|EEX47352.1| putative DNA processing protein DprA [Bacteroides finegoldii DSM
17565]
Length = 309
Score = 41.3 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +P N++L +EI GG +SE PFG
Sbjct: 178 VASGLDITHPKVNKSLQDEIIAKGGTILSEHPFG 211
>gi|328954307|ref|YP_004371641.1| DNA protecting protein DprA [Desulfobacca acetoxidans DSM 11109]
gi|328454631|gb|AEB10460.1| DNA protecting protein DprA [Desulfobacca acetoxidans DSM 11109]
Length = 366
Score = 41.3 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN+ L ++I G +SE P G
Sbjct: 175 LGCGLDVIYPQENKALYQQI-SENGALVSEFPLG 207
>gi|71277761|ref|YP_266804.1| putative DNA processing protein DprA [Colwellia psychrerythraea
34H]
gi|71143501|gb|AAZ23974.1| putative DNA processing protein DprA [Colwellia psychrerythraea
34H]
Length = 383
Score = 41.3 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP + +L ++I D+ G ISE G
Sbjct: 177 VATGLDQVYPARHHSLAQKIIDSSGAIISEFVPG 210
>gi|333030447|ref|ZP_08458508.1| SMF family protein [Bacteroides coprosuis DSM 18011]
gi|332741044|gb|EGJ71526.1| SMF family protein [Bacteroides coprosuis DSM 18011]
Length = 310
Score = 40.9 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL+ +YP +N +L + I +GG+ +SE P G
Sbjct: 186 LAHGLEKVYPYKNSSLADRILASGGVVLSEYPIG 219
>gi|330994161|ref|ZP_08318089.1| Protein smf [Gluconacetobacter sp. SXCC-1]
gi|329758628|gb|EGG75144.1| Protein smf [Gluconacetobacter sp. SXCC-1]
Length = 390
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLDC YPPE+ +L I G ++E P G
Sbjct: 168 IAGGLDCPYPPEHADLQARI-AGTGAVVTEAPLG 200
>gi|312115161|ref|YP_004012757.1| DNA protecting protein DprA [Rhodomicrobium vannielii ATCC 17100]
gi|311220290|gb|ADP71658.1| DNA protecting protein DprA [Rhodomicrobium vannielii ATCC 17100]
Length = 487
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GGLD +YPPE+ L +I G+ I E P G
Sbjct: 269 LPGGLDRIYPPEHLGLAADI-AQNGLLIGECPPG 301
>gi|154253273|ref|YP_001414097.1| DNA protecting protein DprA [Parvibaculum lavamentivorans DS-1]
gi|154157223|gb|ABS64440.1| DNA protecting protein DprA [Parvibaculum lavamentivorans DS-1]
Length = 372
Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD +YP ENR L I G +SE+P G
Sbjct: 170 LAGGLDIVYPEENRELQTAIASQ-GALVSEMPPG 202
>gi|323140523|ref|ZP_08075450.1| DNA protecting protein DprA [Phascolarctobacterium sp. YIT 12067]
gi|322414975|gb|EFY05767.1| DNA protecting protein DprA [Phascolarctobacterium sp. YIT 12067]
Length = 385
Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPEN L I + G ++E P G
Sbjct: 182 LGCGLDIVYPPENAKLFARIAEQ-GALVTEYPPG 214
>gi|57238947|ref|YP_180083.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Welgevonden]
gi|58578880|ref|YP_197092.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Welgevonden]
gi|57161026|emb|CAH57932.1| putative DNA processing protein chain A [Ehrlichia ruminantium str.
Welgevonden]
gi|58417506|emb|CAI26710.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Welgevonden]
Length = 375
Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
M G++ +YP EN L I DNGG+ +E PF
Sbjct: 174 MGNGINIVYPEENTTLYNAITDNGGLIATEFPF 206
>gi|58616939|ref|YP_196138.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Gardel]
gi|58416551|emb|CAI27664.1| Smf protein (DNA processing chain A) [Ehrlichia ruminantium str.
Gardel]
Length = 375
Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
M G++ +YP EN L I DNGG+ +E PF
Sbjct: 174 MGNGINIVYPEENTTLYNAITDNGGLIATEFPF 206
>gi|262089745|gb|ACY24839.1| Smf protein [uncultured organism]
Length = 382
Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD +YP +R L ++I D GG +SE+P G
Sbjct: 179 MGTGLDMIYPSRHRALAQQIVDIGGALVSELPLG 212
>gi|154500973|ref|ZP_02039011.1| hypothetical protein BACCAP_04659 [Bacteroides capillosus ATCC
29799]
gi|150269997|gb|EDM97516.1| hypothetical protein BACCAP_04659 [Bacteroides capillosus ATCC
29799]
Length = 408
Score = 40.9 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YP ENR L E++ G ISE P G
Sbjct: 171 LGGGIDVVYPAENRWLYEDV-AAAGALISEYPPG 203
>gi|297588473|ref|ZP_06947116.1| SMF family DNA processing protein [Finegoldia magna ATCC 53516]
gi|297573846|gb|EFH92567.1| SMF family DNA processing protein [Finegoldia magna ATCC 53516]
Length = 356
Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MAGGLDCLYPPENRNLLEE-IWDNGGIAISEIPFG 34
+ G+D +YP N + ++ I + G+ +SE PFG
Sbjct: 167 LGCGIDQVYPRSNYRVFQDMISSHNGVIMSEYPFG 201
>gi|54026111|ref|YP_120353.1| putative Rossmann-fold nucleotide-binding protein [Nocardia
farcinica IFM 10152]
gi|54017619|dbj|BAD58989.1| putative Rossmann-fold nucleotide-binding protein [Nocardia
farcinica IFM 10152]
Length = 392
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP ++ LL EI G+ +SE P G
Sbjct: 188 LACGVDRPYPAQHDRLLAEI-AEVGLVVSEYPPG 220
>gi|225175754|ref|ZP_03729747.1| DNA protecting protein DprA [Dethiobacter alkaliphilus AHT 1]
gi|225168678|gb|EEG77479.1| DNA protecting protein DprA [Dethiobacter alkaliphilus AHT 1]
Length = 361
Score = 40.5 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD YPPE+ L+E I +N G ISE P G
Sbjct: 162 LGHGLDLCYPPEHLELMEAIVEN-GAVISEYPPG 194
>gi|218263971|ref|ZP_03477902.1| hypothetical protein PRABACTJOHN_03592 [Parabacteroides johnsonii
DSM 18315]
gi|218222382|gb|EEC95032.1| hypothetical protein PRABACTJOHN_03592 [Parabacteroides johnsonii
DSM 18315]
Length = 322
Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 1 MAGGLD--CLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN L ++I + GG+ +SE P G
Sbjct: 179 LANGLDWESIYPKENLELAKDIVEKGGLLLSEYPVG 214
>gi|325479008|gb|EGC82109.1| DNA protecting protein DprA [Anaerococcus prevotii ACS-065-V-Col13]
Length = 365
Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP +N++L I + G+ +SE P G
Sbjct: 174 IGCGIDKIYPKQNKDLYRRI-EENGLILSEFPLG 206
>gi|118443914|ref|YP_878225.1| DNA uptake protein [Clostridium novyi NT]
gi|118134370|gb|ABK61414.1| DNA uptake protein [Clostridium novyi NT]
Length = 359
Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+N+ +EI N G IS+ P G
Sbjct: 169 LGSGIDVIYPRENKNIYDEIIKN-GCVISQFPPG 201
>gi|304316916|ref|YP_003852061.1| DNA protecting protein DprA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778418|gb|ADL68977.1| DNA protecting protein DprA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 362
Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I N G +SE P
Sbjct: 171 LGCGVNIVYPEENKRLMEDIISN-GAVVSEYPL 202
>gi|188586006|ref|YP_001917551.1| DNA protecting protein DprA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350693|gb|ACB84963.1| DNA protecting protein DprA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 349
Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GLD +YPPENR L ++I G+ ISE P
Sbjct: 163 LGNGLDIIYPPENRELYKQI-SEKGLLISEYPP 194
>gi|192360468|ref|YP_001984037.1| smf protein [Cellvibrio japonicus Ueda107]
gi|190686633|gb|ACE84311.1| smf protein [Cellvibrio japonicus Ueda107]
Length = 387
Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D +YP +R L ++I GG +SE P G
Sbjct: 179 MGTGIDRIYPGRHRTLAQQIIAQGGALVSEFPLG 212
>gi|308177311|ref|YP_003916717.1| smf family protein [Arthrobacter arilaitensis Re117]
gi|307744774|emb|CBT75746.1| putative smf family protein [Arthrobacter arilaitensis Re117]
Length = 414
Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D LYP N NLL +I G+ +SE+P G
Sbjct: 216 MAGGIDRLYPSGNSNLLNQIVAR-GVLLSEVPPG 248
>gi|169630293|ref|YP_001703942.1| hypothetical protein MAB_3212c [Mycobacterium abscessus ATCC 19977]
gi|169242260|emb|CAM63288.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 378
Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL I + G+ +SE P G
Sbjct: 180 LAGGVDVPYPAGHSGLLYRIARH-GLVVSEYPPG 212
>gi|255263932|ref|ZP_05343274.1| DNA protecting protein DprA [Thalassiobium sp. R2A62]
gi|255106267|gb|EET48941.1| DNA protecting protein DprA [Thalassiobium sp. R2A62]
Length = 197
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+DC+YP EN L +I G+ +SE P G
Sbjct: 153 MAGGVDCIYPSENTELARKI-AQNGVRVSEQPIG 185
>gi|222054654|ref|YP_002537016.1| DNA protecting protein DprA [Geobacter sp. FRC-32]
gi|221563943|gb|ACM19915.1| DNA protecting protein DprA [Geobacter sp. FRC-32]
Length = 359
Score = 40.2 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR L +E+ + G +SE P G
Sbjct: 170 LGCGIDIVYPPENRPLFKEM-EEKGALVSEFPMG 202
>gi|148265710|ref|YP_001232416.1| DNA protecting protein DprA [Geobacter uraniireducens Rf4]
gi|146399210|gb|ABQ27843.1| DNA protecting protein DprA [Geobacter uraniireducens Rf4]
Length = 359
Score = 40.2 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN+ L +E+ G +SE P G
Sbjct: 170 LGCGIDVVYPPENQRLFKEM-AEKGALVSEFPMG 202
>gi|39997645|ref|NP_953596.1| DNA processing protein DprA [Geobacter sulfurreducens PCA]
gi|39984537|gb|AAR35923.1| DNA processing protein DprA [Geobacter sulfurreducens PCA]
gi|298506585|gb|ADI85308.1| DNA uptake/processing protein SMF [Geobacter sulfurreducens KN400]
Length = 356
Score = 40.2 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPENR L + D G +SE P G
Sbjct: 168 LGCGIDVVYPPENRALFARVADR-GALVSEFPLG 200
>gi|291299698|ref|YP_003510976.1| DNA protecting protein DprA [Stackebrandtia nassauensis DSM 44728]
gi|290568918|gb|ADD41883.1| DNA protecting protein DprA [Stackebrandtia nassauensis DSM 44728]
Length = 384
Score = 40.2 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP N L E I G+ +SE P G
Sbjct: 185 LACGVDRPYPAANAGLFERI-AETGLLVSEWPPG 217
>gi|154482594|ref|ZP_02025042.1| hypothetical protein EUBVEN_00261 [Eubacterium ventriosum ATCC
27560]
gi|149736619|gb|EDM52505.1| hypothetical protein EUBVEN_00261 [Eubacterium ventriosum ATCC
27560]
Length = 333
Score = 40.2 bits (93), Expect = 0.097, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN L +I NGG ISE P G
Sbjct: 144 LGSGVDVCYPTENIELYNDILKNGG-IISEYPPG 176
>gi|302338070|ref|YP_003803276.1| DNA protecting protein DprA [Spirochaeta smaragdinae DSM 11293]
gi|301635255|gb|ADK80682.1| DNA protecting protein DprA [Spirochaeta smaragdinae DSM 11293]
Length = 337
Score = 40.2 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP + L E I GG +SE P G
Sbjct: 171 LGSGVDRIYPEAHHRLAERILAEGGGLVSEYPPG 204
>gi|254447541|ref|ZP_05061007.1| DNA protecting protein DprA [gamma proteobacterium HTCC5015]
gi|198262884|gb|EDY87163.1| DNA protecting protein DprA [gamma proteobacterium HTCC5015]
Length = 373
Score = 40.2 bits (93), Expect = 0.100, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G D +YP ++R+L I GG ++E P G
Sbjct: 172 MATGADRVYPAKHRDLAHRIVAEGGALVTEFPLG 205
>gi|225019249|ref|ZP_03708441.1| hypothetical protein CLOSTMETH_03202 [Clostridium methylpentosum
DSM 5476]
gi|224947880|gb|EEG29089.1| hypothetical protein CLOSTMETH_03202 [Clostridium methylpentosum
DSM 5476]
Length = 369
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
++ LD YP N L EI +GG +SE P G
Sbjct: 172 LSCPLDKNYPASNEGLRREILRHGGALVSEFPPG 205
>gi|84501686|ref|ZP_00999858.1| DNA processing protein DprA, putative [Oceanicola batsensis
HTCC2597]
gi|84390307|gb|EAQ02866.1| DNA processing protein DprA, putative [Oceanicola batsensis
HTCC2597]
Length = 372
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D LYPPEN L + I G +SE+P G
Sbjct: 153 MAGGVDALYPPENATLADAI-PGTGARLSEMPMG 185
>gi|296139360|ref|YP_003646603.1| DNA protecting protein DprA [Tsukamurella paurometabola DSM 20162]
gi|296027494|gb|ADG78264.1| DNA protecting protein DprA [Tsukamurella paurometabola DSM 20162]
Length = 388
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP + L I G ISE P G
Sbjct: 191 VAGGLDRPYPAGHAGLFRRI-AEDGAVISEYPPG 223
>gi|81299514|ref|YP_399722.1| DNA processing protein DprA, putative [Synechococcus elongatus PCC
7942]
gi|81168395|gb|ABB56735.1| DNA processing protein DprA, putative [Synechococcus elongatus PCC
7942]
Length = 402
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G++ +YPP+NR L E I + GG+ +SE P G
Sbjct: 200 LGTGVNVIYPPQNRALYEAILEQGGLILSEQPSG 233
>gi|56750836|ref|YP_171537.1| DNA processing protein [Synechococcus elongatus PCC 6301]
gi|56685795|dbj|BAD79017.1| DNA processing protein [Synechococcus elongatus PCC 6301]
Length = 406
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G++ +YPP+NR L E I + GG+ +SE P G
Sbjct: 204 LGTGVNVIYPPQNRALYEAILEQGGLILSEQPSG 237
>gi|284099271|ref|ZP_06385988.1| SMF protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830401|gb|EFC34611.1| SMF protein [Candidatus Poribacteria sp. WGA-A3]
Length = 375
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPPE+R L ++I + G +SE+P G
Sbjct: 175 VGCGVDRTYPPEHRQLRKDI-EVNGAVVSELPLG 207
>gi|262376935|ref|ZP_06070162.1| DNA protecting protein DprA [Acinetobacter lwoffii SH145]
gi|262308280|gb|EEY89416.1| DNA protecting protein DprA [Acinetobacter lwoffii SH145]
Length = 379
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
MA GLD YP ++++L ++I ++GG ISE
Sbjct: 179 MATGLDQTYPAQHQSLRQQIIEHGGAVISE 208
>gi|302392405|ref|YP_003828225.1| DNA protecting protein DprA [Acetohalobium arabaticum DSM 5501]
gi|302204482|gb|ADL13160.1| DNA protecting protein DprA [Acetohalobium arabaticum DSM 5501]
Length = 367
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN L+ EI + G IS P G
Sbjct: 171 LGSGIDVIYPPENDELVTEI-EESGAVISSFPLG 203
>gi|257458421|ref|ZP_05623563.1| smf protein [Treponema vincentii ATCC 35580]
gi|257444225|gb|EEV19326.1| smf protein [Treponema vincentii ATCC 35580]
Length = 318
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N L I + GG +SE G
Sbjct: 178 LACGLDRLYPQSNARLAGRILETGGCILSEYAPG 211
>gi|182412005|ref|YP_001817071.1| DNA protecting protein DprA [Opitutus terrae PB90-1]
gi|177839219|gb|ACB73471.1| DNA protecting protein DprA [Opitutus terrae PB90-1]
Length = 382
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN L +I + G +SE PFG
Sbjct: 177 VGCGIDIIYPPENLALYRQI-EATGAVLSEFPFG 209
>gi|254784307|ref|YP_003071735.1| SMF protein [Teredinibacter turnerae T7901]
gi|237686231|gb|ACR13495.1| SMF protein [Teredinibacter turnerae T7901]
Length = 389
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N+ + ++I GG +SE P G
Sbjct: 178 LGTGIDQVYPQRNKQMADQIVQTGGALVSEFPLG 211
>gi|257066778|ref|YP_003153034.1| DNA protecting protein DprA [Anaerococcus prevotii DSM 20548]
gi|256798658|gb|ACV29313.1| DNA protecting protein DprA [Anaerococcus prevotii DSM 20548]
Length = 363
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP +NR+L I + G+ +SE P G
Sbjct: 172 IGCGIDKIYPKQNRDLYRRI-EENGLILSEFPLG 204
>gi|254446574|ref|ZP_05060050.1| DNA protecting protein DprA, putative [Verrucomicrobiae bacterium
DG1235]
gi|198260882|gb|EDY85190.1| DNA protecting protein DprA, putative [Verrucomicrobiae bacterium
DG1235]
Length = 376
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPEN +L + G +SE PFG
Sbjct: 179 CGIDIVYPPENVDLFRQ-AQVNGAVVSEFPFG 209
>gi|258511359|ref|YP_003184793.1| DNA protecting protein DprA [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478085|gb|ACV58404.1| DNA protecting protein DprA [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 366
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPP NR L ++I G +SE P G
Sbjct: 175 LGCGIDRCYPPSNRRLYDQIAST-GTLVSEYPPG 207
>gi|167771636|ref|ZP_02443689.1| hypothetical protein ANACOL_03008 [Anaerotruncus colihominis DSM
17241]
gi|167666276|gb|EDS10406.1| hypothetical protein ANACOL_03008 [Anaerotruncus colihominis DSM
17241]
Length = 415
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP + L I D GG ++E PFG
Sbjct: 172 LACGLDVDYPSASGELKRRILDAGGALVTEFPFG 205
>gi|188589719|ref|YP_001920600.1| DNA protecting protein DprA [Clostridium botulinum E3 str. Alaska
E43]
gi|188500000|gb|ACD53136.1| DNA protecting protein DprA [Clostridium botulinum E3 str. Alaska
E43]
Length = 352
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN +L ++ + G+ ISE P G
Sbjct: 168 LGCGIDVVYPSENIDLFSKVIKD-GLIISEFPLG 200
>gi|189502567|ref|YP_001958284.1| hypothetical protein Aasi_1230 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498008|gb|ACE06555.1| hypothetical protein Aasi_1230 [Candidatus Amoebophilus asiaticus
5a2]
Length = 374
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD +YP ++ + ++ +GG+ +SEIP G
Sbjct: 176 LAGGLDKIYPTAHKKVALDMLADGGL-VSEIPIG 208
>gi|288958693|ref|YP_003449034.1| DNA processing protein [Azospirillum sp. B510]
gi|288911001|dbj|BAI72490.1| DNA processing protein [Azospirillum sp. B510]
Length = 378
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN L +I G+ ++E G
Sbjct: 173 LAGGIDVVYPPENEALYRDILAQ-GVIVAESAIG 205
>gi|251779444|ref|ZP_04822364.1| DNA protecting protein DprA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083759|gb|EES49649.1| DNA protecting protein DprA [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 352
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN +L ++ + G+ ISE P G
Sbjct: 168 LGCGIDVVYPSENIDLFSKVIKD-GLIISEFPLG 200
>gi|84498371|ref|ZP_00997168.1| SMF protein [Janibacter sp. HTCC2649]
gi|84381871|gb|EAP97754.1| SMF protein [Janibacter sp. HTCC2649]
Length = 390
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP + LL EI D G+ +SE+P G
Sbjct: 192 LARGLDRAYPQAHEGLLREIAD-IGVVVSELPLG 224
>gi|300718671|ref|YP_003743474.1| DNA protecting protein [Erwinia billingiae Eb661]
gi|299064507|emb|CAX61627.1| DNA protecting protein [Erwinia billingiae Eb661]
Length = 374
Score = 39.8 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ++ +L +EI +GG ISE P
Sbjct: 167 LGSGLNHLYPRQHISLAKEIIASGGAVISEFPL 199
>gi|147677580|ref|YP_001211795.1| Rossmann fold nucleotide-binding protein [Pelotomaculum
thermopropionicum SI]
gi|146273677|dbj|BAF59426.1| predicted Rossmann fold nucleotide-binding protein [Pelotomaculum
thermopropionicum SI]
Length = 367
Score = 39.8 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D +YP ENR L+E+I N G ISE P G
Sbjct: 172 LGCGPDVVYPRENRRLMEKII-NNGAVISEYPPG 204
>gi|322420083|ref|YP_004199306.1| DNA protecting protein DprA [Geobacter sp. M18]
gi|320126470|gb|ADW14030.1| DNA protecting protein DprA [Geobacter sp. M18]
Length = 359
Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN L + + G ISE P G
Sbjct: 170 LGCGIDVVYPPENDTLYRSLCEQ-GAVISEFPMG 202
>gi|291549900|emb|CBL26162.1| DNA protecting protein DprA [Ruminococcus torques L2-14]
Length = 370
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP ++ L +I ++GG +SE P G
Sbjct: 175 LGSGVDVCYPRDHIGLYMDIIEHGGGILSEFPPG 208
>gi|95929065|ref|ZP_01311810.1| DNA processing protein DprA, putative [Desulfuromonas acetoxidans
DSM 684]
gi|95134966|gb|EAT16620.1| DNA processing protein DprA, putative [Desulfuromonas acetoxidans
DSM 684]
Length = 363
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ENR+L E+I GI +SE P G
Sbjct: 170 LGCGIDLIYPKENRHLFEQI-GEKGIIVSEYPPG 202
>gi|326793338|ref|YP_004311158.1| DNA protecting protein DprA [Marinomonas mediterranea MMB-1]
gi|326544102|gb|ADZ89322.1| DNA protecting protein DprA [Marinomonas mediterranea MMB-1]
Length = 442
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
M GL LYP +N L +I + GG+ +SE P
Sbjct: 206 MGTGLLNLYPKQNIGLFTKIVEQGGVLVSEYPL 238
>gi|114763467|ref|ZP_01442874.1| DNA processing protein DprA, putative [Pelagibaca bermudensis
HTCC2601]
gi|114544005|gb|EAU47016.1| DNA processing protein DprA, putative [Roseovarius sp. HTCC2601]
Length = 375
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D LYP EN L EEI GG +SE G
Sbjct: 153 MAGGVDILYPSENTRLGEEIRARGGALVSEHAMG 186
>gi|87199818|ref|YP_497075.1| DNA processing protein DprA, putative [Novosphingobium
aromaticivorans DSM 12444]
gi|87135499|gb|ABD26241.1| DNA protecting protein DprA [Novosphingobium aromaticivorans DSM
12444]
Length = 375
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPPE+ +L +E + G+ I+E+P G
Sbjct: 181 IASGIDVTYPPEHGDL-QEQVAHEGLLIAEMPPG 213
>gi|114570266|ref|YP_756946.1| DNA protecting protein DprA [Maricaulis maris MCS10]
gi|114340728|gb|ABI66008.1| DNA protecting protein DprA [Maricaulis maris MCS10]
Length = 387
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPE+ L G+ +SE+P G
Sbjct: 170 LAGGIDHIYPPEHGELHAR-LGEDGLLLSEVPLG 202
>gi|88855250|ref|ZP_01129915.1| DNA processing factor [marine actinobacterium PHSC20C1]
gi|88815778|gb|EAR25635.1| DNA processing factor [marine actinobacterium PHSC20C1]
Length = 434
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + +LL I +N G ISE+P G
Sbjct: 218 LAGGVDRFYPSGHDSLLSRIVEN-GAVISELPCG 250
>gi|269215607|ref|ZP_06159461.1| DNA processing protein DprA [Slackia exigua ATCC 700122]
gi|269131094|gb|EEZ62169.1| DNA processing protein DprA [Slackia exigua ATCC 700122]
Length = 311
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ GG+ YP +N L + I D GG SE P
Sbjct: 106 LGGGIARPYPADNVPLFQRIVDGGGALASEHP 137
>gi|329295655|ref|ZP_08252991.1| DNA protecting protein DprA [Plautia stali symbiont]
Length = 374
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ++ L +EI +GG +SE+P
Sbjct: 167 LGSGLNHLYPKSHQPLAQEIIASGGALVSELPL 199
>gi|302389647|ref|YP_003825468.1| DNA protecting protein DprA [Thermosediminibacter oceani DSM 16646]
gi|302200275|gb|ADL07845.1| DNA protecting protein DprA [Thermosediminibacter oceani DSM 16646]
Length = 359
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN NL+ EI G IS P G
Sbjct: 172 LGCGIDIVYPPENYNLMAEII-KAGCVISSFPMG 204
>gi|260599605|ref|YP_003212176.1| hypothetical protein CTU_38130 [Cronobacter turicensis z3032]
gi|260218782|emb|CBA34130.1| Protein smf [Cronobacter turicensis z3032]
Length = 381
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP +R L EEI + GG +SE PF
Sbjct: 178 LGNGLAQVYPARHRKLAEEIIEQGGAVVSEFPF 210
>gi|218288280|ref|ZP_03492579.1| DNA protecting protein DprA [Alicyclobacillus acidocaldarius LAA1]
gi|218241639|gb|EED08812.1| DNA protecting protein DprA [Alicyclobacillus acidocaldarius LAA1]
Length = 366
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPP NR L ++I G +SE P G
Sbjct: 175 LGCGIDRCYPPSNRRLYDQIAST-GTLVSEYPPG 207
>gi|152994061|ref|YP_001338896.1| DNA protecting protein DprA [Marinomonas sp. MWYL1]
gi|150834985|gb|ABR68961.1| DNA protecting protein DprA [Marinomonas sp. MWYL1]
Length = 442
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
M GL YP NR + EEI + GG ISE P
Sbjct: 210 MGTGLFHRYPHHNRQMFEEILEQGGALISEYPL 242
>gi|254477402|ref|ZP_05090788.1| DNA protecting protein DprA [Ruegeria sp. R11]
gi|214031645|gb|EEB72480.1| DNA protecting protein DprA [Ruegeria sp. R11]
Length = 362
Score = 39.4 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I D G+ +SE P G
Sbjct: 145 MAGGVDVIYPAENLQLARDIADQ-GLLLSEHPPG 177
>gi|320161003|ref|YP_004174227.1| putative DNA processing protein [Anaerolinea thermophila UNI-1]
gi|319994856|dbj|BAJ63627.1| putative DNA processing protein [Anaerolinea thermophila UNI-1]
Length = 370
Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPPE+ L E+I G IS+ G
Sbjct: 172 LGCGLDRIYPPEHSKLAEKIIQQ-GALISDYAPG 204
>gi|313888012|ref|ZP_07821690.1| DNA protecting protein DprA [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845967|gb|EFR33350.1| DNA protecting protein DprA [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 359
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N+ L EEI G ISE P G
Sbjct: 172 LGTGIDVIYPKSNKALYEEI-SEKGAVISEFPLG 204
>gi|225848022|ref|YP_002728185.1| DNA protecting protein DprA [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643199|gb|ACN98249.1| DNA protecting protein DprA [Sulfurihydrogenibium azorense Az-Fu1]
Length = 356
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ENR L ++I +N G ISE P G
Sbjct: 171 LGSGIDVVYPFENRKLYDKITEN-GCVISEFPIG 203
>gi|126733565|ref|ZP_01749312.1| DNA processing protein DprA, putative [Roseobacter sp. CCS2]
gi|126716431|gb|EBA13295.1| DNA processing protein DprA, putative [Roseobacter sp. CCS2]
Length = 379
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I G+ +SE+P G
Sbjct: 180 MAGGVDIIYPAENTQLAHDI-AKRGLRLSEMPMG 212
>gi|197119085|ref|YP_002139512.1| DNA uptake/processing protein SMF [Geobacter bemidjiensis Bem]
gi|197088445|gb|ACH39716.1| DNA uptake/processing protein SMF [Geobacter bemidjiensis Bem]
Length = 359
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPEN L + G ISE P G
Sbjct: 170 LGCGIDLVYPPENGALYQA-LAESGALISEFPMG 202
>gi|225181360|ref|ZP_03734804.1| DNA protecting protein DprA [Dethiobacter alkaliphilus AHT 1]
gi|225167941|gb|EEG76748.1| DNA protecting protein DprA [Dethiobacter alkaliphilus AHT 1]
Length = 357
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D YPPEN L E+I GGI +SE P G
Sbjct: 171 LGCGPDVCYPPENLKLREKIVS-GGIILSEFPPG 203
>gi|159043687|ref|YP_001532481.1| DNA protecting protein DprA [Dinoroseobacter shibae DFL 12]
gi|157911447|gb|ABV92880.1| DNA protecting protein DprA [Dinoroseobacter shibae DFL 12]
Length = 379
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD +YP EN L + I G+ +SE P G
Sbjct: 183 VAGGLDVIYPKENTELFKRIAKQ-GLIVSEQPLG 215
>gi|325579162|ref|ZP_08149118.1| DNA processing SMF protein [Haemophilus parainfluenzae ATCC 33392]
gi|325159397|gb|EGC71531.1| DNA processing SMF protein [Haemophilus parainfluenzae ATCC 33392]
Length = 367
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++R L E+I +N G +SE
Sbjct: 170 LGSGLDHIYPAKHRRLAEQIIENNGALVSE 199
>gi|301155615|emb|CBW15083.1| conserved protein [Haemophilus parainfluenzae T3T1]
Length = 371
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++R L E+I +N G +SE
Sbjct: 170 LGSGLDHIYPAKHRRLAEQIIENNGALVSE 199
>gi|310641535|ref|YP_003946293.1| DNA protecting protein dpra [Paenibacillus polymyxa SC2]
gi|309246485|gb|ADO56052.1| DNA protecting protein DprA [Paenibacillus polymyxa SC2]
Length = 409
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ +D +YPP+N +L E+ G+ +SE P G
Sbjct: 208 LGTAIDQIYPPQNASLFAEMAS-KGLIVSEYPPG 240
>gi|332670025|ref|YP_004453033.1| SMF family protein [Cellulomonas fimi ATCC 484]
gi|332339063|gb|AEE45646.1| SMF family protein [Cellulomonas fimi ATCC 484]
Length = 412
Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP N ++ + D+GG +SE+P G
Sbjct: 190 LAGGVDRAYPVGNARMIAAVMDDGGTVVSEVPVG 223
>gi|291522666|emb|CBK80959.1| DNA protecting protein DprA [Coprococcus catus GD/7]
Length = 359
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN +L EI NGG +SE P G
Sbjct: 173 LGCGVDVCYPRENIDLYTEISRNGG-ILSEFPPG 205
>gi|33152875|ref|NP_874228.1| DNA processing chain A [Haemophilus ducreyi 35000HP]
gi|33149100|gb|AAP96617.1| smf protein [Haemophilus ducreyi 35000HP]
Length = 380
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I NGG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIIANGGALVSE 197
>gi|160884358|ref|ZP_02065361.1| hypothetical protein BACOVA_02336 [Bacteroides ovatus ATCC 8483]
gi|255691673|ref|ZP_05415348.1| putative DNA protecting protein DprA [Bacteroides finegoldii DSM
17565]
gi|156110097|gb|EDO11842.1| hypothetical protein BACOVA_02336 [Bacteroides ovatus ATCC 8483]
gi|260622745|gb|EEX45616.1| putative DNA protecting protein DprA [Bacteroides finegoldii DSM
17565]
Length = 320
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 1 MAGGLD--CLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN +L +EI G+ +SE P G
Sbjct: 179 LANGLDWDSIYPKENLDLAKEIVVKRGLLLSEYPVG 214
>gi|227499921|ref|ZP_03930014.1| SMF family DNA processing protein [Anaerococcus tetradius ATCC
35098]
gi|227218030|gb|EEI83303.1| SMF family DNA processing protein [Anaerococcus tetradius ATCC
35098]
Length = 363
Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP +NR+L I + G+ +SE P G
Sbjct: 172 IGCGIDKIYPKKNRDLYRRI-EESGLILSEFPLG 204
>gi|308068644|ref|YP_003870249.1| Smf protein [Paenibacillus polymyxa E681]
gi|305857923|gb|ADM69711.1| Smf protein [Paenibacillus polymyxa E681]
Length = 395
Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ +D +YPP+N +L E+ G+ +SE P G
Sbjct: 194 LGTAIDQIYPPQNASLFAEMAS-KGLIVSEYPPG 226
>gi|228471288|ref|ZP_04056094.1| Smf protein DNA processing chain A [Porphyromonas uenonis 60-3]
gi|228306930|gb|EEK16028.1| Smf protein DNA processing chain A [Porphyromonas uenonis 60-3]
Length = 384
Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL +YP +RNL I +GG +SE P G
Sbjct: 179 LAHGLHMIYPSNHRNLARSIVSHGGALLSEYPAG 212
>gi|158424472|ref|YP_001525764.1| SMF protein [Azorhizobium caulinodans ORS 571]
gi|158331361|dbj|BAF88846.1| SMF protein [Azorhizobium caulinodans ORS 571]
Length = 374
Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL YP EN L++ + G +SE+P G
Sbjct: 174 AGGLSRPYPAENVPLIQAV-AEKGAVVSEMPLG 205
>gi|332991531|gb|AEF01586.1| DNA protecting protein DprA [Alteromonas sp. SN2]
Length = 385
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G D +YPP+N +L +I + GG I+E G
Sbjct: 190 MGTGPDIVYPPKNVSLHRDIVNAGGACITEFFPG 223
>gi|89071023|ref|ZP_01158240.1| DNA processing protein DprA, putative [Oceanicola granulosus
HTCC2516]
gi|89043411|gb|EAR49628.1| DNA processing protein DprA, putative [Oceanicola granulosus
HTCC2516]
Length = 356
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN L +I G+ +SE G
Sbjct: 153 LAGGIDVIYPPENAGLARDIAAQ-GVLLSEQRPG 185
>gi|281421987|ref|ZP_06252986.1| putative DNA protecting protein DprA [Prevotella copri DSM 18205]
gi|281403945|gb|EFB34625.1| putative DNA protecting protein DprA [Prevotella copri DSM 18205]
Length = 321
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 1 MAGGLD--CLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP EN L + I ++GG+ +SE P G
Sbjct: 179 LANGLDWESIYPKENLELAKNIVESGGLLLSEYPVG 214
>gi|327395470|dbj|BAK12892.1| protein Smf [Pantoea ananatis AJ13355]
Length = 374
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP + L +EI + GG ISE P
Sbjct: 167 LGSGLAHLYPRRHVALAQEIVEQGGAVISEFPL 199
>gi|300907197|ref|ZP_07124860.1| putative DNA protecting protein DprA [Escherichia coli MS 84-1]
gi|301303624|ref|ZP_07209746.1| putative DNA protecting protein DprA [Escherichia coli MS 124-1]
gi|300401072|gb|EFJ84610.1| putative DNA protecting protein DprA [Escherichia coli MS 84-1]
gi|300841123|gb|EFK68883.1| putative DNA protecting protein DprA [Escherichia coli MS 124-1]
gi|315257854|gb|EFU37822.1| putative DNA protecting protein DprA [Escherichia coli MS 85-1]
Length = 324
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL+ P +N L +EI D GG ISE P G
Sbjct: 178 LAHGLEEAKPKQNSRLAQEILDKGGAWISEYPMG 211
>gi|300780927|ref|ZP_07090781.1| smf family protein [Corynebacterium genitalium ATCC 33030]
gi|300532634|gb|EFK53695.1| smf family protein [Corynebacterium genitalium ATCC 33030]
Length = 398
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G +YP N L + I GG ++E P G
Sbjct: 198 ACGPGQIYPKRNGKLFDRIAAEGGAIVTEYPPG 230
>gi|290512103|ref|ZP_06551471.1| DNA processing protein [Klebsiella sp. 1_1_55]
gi|289775893|gb|EFD83893.1| DNA processing protein [Klebsiella sp. 1_1_55]
Length = 374
Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + NL ++I DNGG +SE P
Sbjct: 167 LGNGLEQVYPRRHANLAQQIIDNGGTLVSEFPL 199
>gi|148556726|ref|YP_001264308.1| DNA protecting protein DprA [Sphingomonas wittichii RW1]
gi|148501916|gb|ABQ70170.1| DNA protecting protein DprA [Sphingomonas wittichii RW1]
Length = 592
Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YPPEN L +E G+ I+E P G
Sbjct: 395 IAGGIDIVYPPENAAL-QEAIAERGLLIAEQPPG 427
>gi|291619141|ref|YP_003521883.1| Smf [Pantoea ananatis LMG 20103]
gi|291154171|gb|ADD78755.1| Smf [Pantoea ananatis LMG 20103]
Length = 376
Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP + L +EI + GG ISE P
Sbjct: 169 LGSGLAHLYPRRHVALAQEIVEQGGAVISEFPL 201
>gi|288933301|ref|YP_003437360.1| DNA protecting protein DprA [Klebsiella variicola At-22]
gi|288888030|gb|ADC56348.1| DNA protecting protein DprA [Klebsiella variicola At-22]
Length = 374
Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + NL ++I DNGG +SE P
Sbjct: 167 LGNGLEQVYPRRHANLAQQIIDNGGTLVSEFPL 199
>gi|288923345|ref|ZP_06417477.1| DNA protecting protein DprA [Frankia sp. EUN1f]
gi|288345308|gb|EFC79705.1| DNA protecting protein DprA [Frankia sp. EUN1f]
Length = 311
Score = 38.6 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + +L +I + G +SE P G
Sbjct: 182 LAGGVDIPYPAAHADLFHDIAHH-GALVSEAPPG 214
>gi|332300411|ref|YP_004442332.1| DNA protecting protein DprA [Porphyromonas asaccharolytica DSM
20707]
gi|332177474|gb|AEE13164.1| DNA protecting protein DprA [Porphyromonas asaccharolytica DSM
20707]
Length = 384
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL +YP +RNL I +GG +SE P G
Sbjct: 179 LAHGLHMIYPSNHRNLARNIVTHGGALLSEYPAG 212
>gi|120552988|ref|YP_957339.1| DNA protecting protein DprA [Marinobacter aquaeolei VT8]
gi|120322837|gb|ABM17152.1| DNA protecting protein DprA [Marinobacter aquaeolei VT8]
Length = 405
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD LYP ++RNL I +N G+ +SE P G
Sbjct: 201 VGCGLDRLYPAQHRNLAHRIIEN-GLIVSEYPPG 233
>gi|317063578|ref|ZP_07928063.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313689254|gb|EFS26089.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 355
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP ENR L E+I + G+ ISE P G
Sbjct: 172 GLDIIYPKENRILWEQI-ERSGLIISEYPLG 201
>gi|257469331|ref|ZP_05633425.1| Smf protein [Fusobacterium ulcerans ATCC 49185]
Length = 352
Score = 38.6 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP ENR L E+I + G+ ISE P G
Sbjct: 169 GLDIIYPKENRILWEQI-ERSGLIISEYPLG 198
>gi|260889465|ref|ZP_05900728.1| DNA protecting protein DprA [Leptotrichia hofstadii F0254]
gi|260860876|gb|EEX75376.1| DNA protecting protein DprA [Leptotrichia hofstadii F0254]
Length = 279
Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP ENR+L E I G ISE P G
Sbjct: 178 GLDVVYPYENRDLWERI-GETGTLISEYPLG 207
>gi|215485950|ref|YP_002328381.1| hypothetical protein E2348C_0815 [Escherichia coli O127:H6 str.
E2348/69]
gi|312969113|ref|ZP_07783320.1| SMF family protein [Escherichia coli 2362-75]
gi|331676604|ref|ZP_08377300.1| DNA protecting protein DprA [Escherichia coli H591]
gi|215264022|emb|CAS08363.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|312286515|gb|EFR14428.1| SMF family protein [Escherichia coli 2362-75]
gi|323942733|gb|EGB38898.1| DNA recombination-mediator protein A [Escherichia coli E482]
gi|331075293|gb|EGI46591.1| DNA protecting protein DprA [Escherichia coli H591]
Length = 319
Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL+ P +N L +EI D GG ISE P G
Sbjct: 173 LAHGLEEAKPKQNSRLAQEILDKGGAWISEYPMG 206
>gi|251797454|ref|YP_003012185.1| DNA protecting protein DprA [Paenibacillus sp. JDR-2]
gi|247545080|gb|ACT02099.1| DNA protecting protein DprA [Paenibacillus sp. JDR-2]
Length = 371
Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A +D YPPENR+L ++I G+ +SE P G
Sbjct: 177 LASPVDHCYPPENRSLYQQIV-REGLILSESPVG 209
>gi|51244646|ref|YP_064530.1| SMF protein (DNA processing chain A) [Desulfotalea psychrophila
LSv54]
gi|50875683|emb|CAG35523.1| probable SMF protein (DNA processing chain A) [Desulfotalea
psychrophila LSv54]
Length = 357
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP +N+ L +I G+ I+E P G
Sbjct: 168 LGCGLDIVYPYQNKKLY-KIIAGEGLVITEYPLG 200
>gi|300783888|ref|YP_003764179.1| DNA processing protein [Amycolatopsis mediterranei U32]
gi|299793402|gb|ADJ43777.1| DNA processing protein [Amycolatopsis mediterranei U32]
Length = 332
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ +D YP + LL I +GG ISE P G
Sbjct: 134 LGCAVDNGYPAGHIGLLNRIAGSGGAVISEYPPG 167
>gi|297623876|ref|YP_003705310.1| DNA protecting protein DprA [Truepera radiovictrix DSM 17093]
gi|297165056|gb|ADI14767.1| DNA protecting protein DprA [Truepera radiovictrix DSM 17093]
Length = 372
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP +N L I D GG +SE G
Sbjct: 182 LGSGVDRPYPAQNARLARRIADGGGAVVSEYRLG 215
>gi|16329968|ref|NP_440696.1| hypothetical protein slr1197 [Synechocystis sp. PCC 6803]
gi|3914979|sp|P73345|SMF_SYNY3 RecName: Full=Protein smf
gi|1652454|dbj|BAA17376.1| slr1197 [Synechocystis sp. PCC 6803]
Length = 398
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPP+NR L E+I G+ +SE P G
Sbjct: 178 LGTGLDLIYPPQNRQLFEQI-AAEGLILSEYPVG 210
>gi|187734950|ref|YP_001877062.1| DNA protecting protein DprA [Akkermansia muciniphila ATCC BAA-835]
gi|187425002|gb|ACD04281.1| DNA protecting protein DprA [Akkermansia muciniphila ATCC BAA-835]
Length = 375
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ENRNL + I D G +SE P
Sbjct: 173 IGAGLNKLYPRENRNLAQRIADGHGAVVSEFPM 205
>gi|323136208|ref|ZP_08071290.1| DNA protecting protein DprA [Methylocystis sp. ATCC 49242]
gi|322398282|gb|EFY00802.1| DNA protecting protein DprA [Methylocystis sp. ATCC 49242]
Length = 424
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGG YP E+ L+EEI G+ +SE+P
Sbjct: 175 LAGGQARPYPAEHGRLIEEI-AERGLIVSEMPL 206
>gi|325673466|ref|ZP_08153157.1| DNA protecting protein DprA [Rhodococcus equi ATCC 33707]
gi|325555487|gb|EGD25158.1| DNA protecting protein DprA [Rhodococcus equi ATCC 33707]
Length = 373
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL++I G ISE P G
Sbjct: 181 LACGVDRAYPAGHGRLLQQI-ARDGAVISEYPPG 213
>gi|312139229|ref|YP_004006565.1| smf family protein [Rhodococcus equi 103S]
gi|311888568|emb|CBH47880.1| putative SMF family protein [Rhodococcus equi 103S]
Length = 373
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL++I G ISE P G
Sbjct: 181 LACGVDRAYPAGHGRLLQQI-ARDGAVISEYPPG 213
>gi|187935056|ref|YP_001885453.1| DNA uptake protein [Clostridium botulinum B str. Eklund 17B]
gi|187723209|gb|ACD24430.1| DNA uptake protein [Clostridium botulinum B str. Eklund 17B]
Length = 352
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L ++ + G+ ISE P G
Sbjct: 168 LGCGIDVVYPSENIALFSKVIKD-GLIISEFPLG 200
>gi|92114982|ref|YP_574910.1| DNA processing protein DprA, putative [Chromohalobacter salexigens
DSM 3043]
gi|91798072|gb|ABE60211.1| DNA protecting protein DprA [Chromohalobacter salexigens DSM 3043]
Length = 371
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G++ +YPP + L + D GG+ +SE P
Sbjct: 177 LGCGVEVIYPPRHAGLYRRLLDEGGLLLSEHP 208
>gi|261856670|ref|YP_003263953.1| DNA protecting protein DprA [Halothiobacillus neapolitanus c2]
gi|261837139|gb|ACX96906.1| DNA protecting protein DprA [Halothiobacillus neapolitanus c2]
Length = 384
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G D +YP E++ L EI GG+ ISE P G
Sbjct: 182 MGTGPDIIYPREHQALAAEIVAQGGLLISEWPPG 215
>gi|262202034|ref|YP_003273242.1| DNA protecting protein DprA [Gordonia bronchialis DSM 43247]
gi|262085381|gb|ACY21349.1| DNA protecting protein DprA [Gordonia bronchialis DSM 43247]
Length = 374
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G+D YP + LL EI G ISE P G
Sbjct: 183 MACGIDRDYPAAHAQLLREI-ARVGAVISEYPPG 215
>gi|167767275|ref|ZP_02439328.1| hypothetical protein CLOSS21_01794 [Clostridium sp. SS2/1]
gi|317497303|ref|ZP_07955626.1| DNA protecting protein DprA [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711250|gb|EDS21829.1| hypothetical protein CLOSS21_01794 [Clostridium sp. SS2/1]
gi|291559414|emb|CBL38214.1| DNA protecting protein DprA [butyrate-producing bacterium SSC/2]
gi|316895372|gb|EFV17531.1| DNA protecting protein DprA [Lachnospiraceae bacterium 5_1_63FAA]
Length = 360
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +++ N ISE P G
Sbjct: 170 LGCGIDLIYPKENFQLFYDMYANQ-TVISEYPPG 202
>gi|254805838|ref|YP_003084059.1| DNA processing protein DprA [Neisseria meningitidis alpha14]
gi|254669380|emb|CBA08516.1| DNA processing protein DprA [Neisseria meningitidis alpha14]
Length = 395
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|217979954|ref|YP_002364101.1| DNA protecting protein DprA [Methylocella silvestris BL2]
gi|217505330|gb|ACK52739.1| DNA protecting protein DprA [Methylocella silvestris BL2]
Length = 422
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGL +YP + L+E + + G A+SE+PFG
Sbjct: 172 LAGGLGNIYPAAHAELVERLIET-GAAVSEMPFG 204
>gi|94266973|ref|ZP_01290622.1| SMF protein [delta proteobacterium MLMS-1]
gi|93452328|gb|EAT02959.1| SMF protein [delta proteobacterium MLMS-1]
Length = 381
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPP+NR L I G+ + E P G
Sbjct: 176 LGCGLDVVYPPQNRQLFHTIGRQRGLLLGEYPLG 209
>gi|269219630|ref|ZP_06163484.1| DNA protecting protein DprA [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269210872|gb|EEZ77212.1| DNA protecting protein DprA [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 468
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A G+D YP + +L EI GG SE P G
Sbjct: 261 ACGVDRYYPASHADLYLEILRRGGAICSEAPPG 293
>gi|189426316|ref|YP_001953493.1| DNA protecting protein DprA [Geobacter lovleyi SZ]
gi|189422575|gb|ACD96973.1| DNA protecting protein DprA [Geobacter lovleyi SZ]
Length = 364
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D YPPENR L E+I G ISE P
Sbjct: 170 LGCGVDVDYPPENRQLAEQI-SGNGCIISEFPM 201
>gi|257125884|ref|YP_003163998.1| DNA protecting protein DprA [Leptotrichia buccalis C-1013-b]
gi|257049823|gb|ACV39007.1| DNA protecting protein DprA [Leptotrichia buccalis C-1013-b]
Length = 363
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP ENR+L E I G ISE P G
Sbjct: 178 GLDIVYPYENRDLWERI-GEVGTLISEYPLG 207
>gi|120403195|ref|YP_953024.1| transcriptional regulator, TrmB [Mycobacterium vanbaalenii PYR-1]
gi|119956013|gb|ABM13018.1| DNA protecting protein DprA [Mycobacterium vanbaalenii PYR-1]
Length = 379
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL + G+ +SE P G
Sbjct: 180 LAGGIDVPYPAGHSALLHRV-SGSGLLVSEYPPG 212
>gi|206900964|ref|YP_002251236.1| DNA processing protein DprA [Dictyoglomus thermophilum H-6-12]
gi|206740067|gb|ACI19125.1| DNA processing protein DprA [Dictyoglomus thermophilum H-6-12]
Length = 364
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ LD +YP N L E I +N G ISE P G
Sbjct: 172 LGSSLDHIYPSGNLKLAERIIEN-GAIISEYPLG 204
>gi|329118699|ref|ZP_08247400.1| SMF-family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465202|gb|EGF11486.1| SMF-family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 422
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI ++ G+ +SE P G
Sbjct: 197 GIDRIYPPSNKNLAYEIAEH-GLIVSEFPLG 226
>gi|262037924|ref|ZP_06011349.1| Smf protein [Leptotrichia goodfellowii F0264]
gi|261748067|gb|EEY35481.1| Smf protein [Leptotrichia goodfellowii F0264]
Length = 351
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN+ L E+I D G+ ISE P G
Sbjct: 166 GLDVVYPYENKMLWEKISDT-GMIISEYPLG 195
>gi|94263095|ref|ZP_01286914.1| SMF protein [delta proteobacterium MLMS-1]
gi|93456638|gb|EAT06746.1| SMF protein [delta proteobacterium MLMS-1]
Length = 381
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPP+NR L I G+ + E P G
Sbjct: 176 LGCGLDVVYPPQNRQLFHTIGRQRGLLLGEYPLG 209
>gi|28572469|ref|NP_789249.1| DNA processing protein [Tropheryma whipplei TW08/27]
gi|28410601|emb|CAD66987.1| putative DNA processing protein [Tropheryma whipplei TW08/27]
Length = 381
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP N L +I ++ GI +SE+P G
Sbjct: 191 AGGVDWIYPRGNEALFSKICES-GIIVSEMPCG 222
>gi|28493420|ref|NP_787581.1| nucleotide-binding protein [Tropheryma whipplei str. Twist]
gi|28476461|gb|AAO44550.1| nucleotide-binding protein [Tropheryma whipplei str. Twist]
Length = 399
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP N L +I ++ GI +SE+P G
Sbjct: 209 AGGVDWIYPRGNEALFSKICES-GIIVSEMPCG 240
>gi|269925224|ref|YP_003321847.1| DNA protecting protein DprA [Thermobaculum terrenum ATCC BAA-798]
gi|269788884|gb|ACZ41025.1| DNA protecting protein DprA [Thermobaculum terrenum ATCC BAA-798]
Length = 365
Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN+ L ++I G +SE P G
Sbjct: 177 LGSGLDQVYPWENKKLADDIV-RSGALVSEYPLG 209
>gi|206579194|ref|YP_002236312.1| DNA protecting protein DprA [Klebsiella pneumoniae 342]
gi|206568252|gb|ACI10028.1| DNA protecting protein DprA [Klebsiella pneumoniae 342]
Length = 360
Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + NL ++I DNGG +SE P
Sbjct: 167 LGNGLEQVYPRRHANLAQQIIDNGGTLVSEFPL 199
>gi|309810346|ref|ZP_07704181.1| putative DNA protecting protein DprA [Dermacoccus sp. Ellin185]
gi|308435659|gb|EFP59456.1| putative DNA protecting protein DprA [Dermacoccus sp. Ellin185]
Length = 283
Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP + LL +I D G+ +SE+P G
Sbjct: 197 LAGGLDRPYPAGHHELLNQIGD-VGLLVSELPPG 229
>gi|161870938|ref|YP_001600118.1| DNA processing chain A [Neisseria meningitidis 053442]
gi|161596491|gb|ABX74151.1| DNA processing chain A [Neisseria meningitidis 053442]
Length = 395
Score = 37.8 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|229817793|ref|ZP_04448075.1| hypothetical protein BIFANG_03065 [Bifidobacterium angulatum DSM
20098]
gi|229785582|gb|EEP21696.1| hypothetical protein BIFANG_03065 [Bifidobacterium angulatum DSM
20098]
Length = 461
Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
AGGL+ + P N L E I NGG +SE+
Sbjct: 221 AGGLNHIGPSSNLRLFEAIRANGGALVSEM 250
>gi|169838993|ref|ZP_02872181.1| DNA uptake protein, SMF family [candidate division TM7
single-cell isolate TM7a]
Length = 169
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +NR L E I +N G +SE P G
Sbjct: 33 GLDIVYPYDNRGLWERIAEN-GTIVSEYPLG 62
>gi|258653287|ref|YP_003202443.1| DNA protecting protein DprA [Nakamurella multipartita DSM 44233]
gi|258556512|gb|ACV79454.1| DNA protecting protein DprA [Nakamurella multipartita DSM 44233]
Length = 423
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP NR+LL ++ G +SE P G
Sbjct: 205 LACGIDRAYPEANRDLL-DLIARHGSVVSEYPPG 237
>gi|313887109|ref|ZP_07820805.1| DNA protecting protein DprA [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923338|gb|EFR34151.1| DNA protecting protein DprA [Porphyromonas asaccharolytica
PR426713P-I]
Length = 384
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL +YP +RNL I ++GG +SE P G
Sbjct: 179 LAHGLHMIYPSNHRNLARNIVNHGGALLSEYPAG 212
>gi|218767196|ref|YP_002341708.1| DprA homolog [Neisseria meningitidis Z2491]
gi|121051204|emb|CAM07475.1| DprA homolog [Neisseria meningitidis Z2491]
Length = 395
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|325133183|gb|EGC55854.1| putative DNA processing protein DprA [Neisseria meningitidis M6190]
Length = 395
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|323705454|ref|ZP_08117029.1| DNA protecting protein DprA [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535356|gb|EGB25132.1| DNA protecting protein DprA [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 362
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ YP EN+ L+EEI G +SE P
Sbjct: 171 LGCGVNIAYPEENKKLMEEIIS-KGAVVSEYPL 202
>gi|302342564|ref|YP_003807093.1| DNA protecting protein DprA [Desulfarculus baarsii DSM 2075]
gi|301639177|gb|ADK84499.1| DNA protecting protein DprA [Desulfarculus baarsii DSM 2075]
Length = 376
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD YPPE+ L+E + G +SE P G
Sbjct: 183 LGCGLDVAYPPEHAGLIERM-AGQGAVVSEFPMG 215
>gi|288922424|ref|ZP_06416612.1| DNA protecting protein DprA [Frankia sp. EUN1f]
gi|288346227|gb|EFC80568.1| DNA protecting protein DprA [Frankia sp. EUN1f]
Length = 383
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + +LL+EI G+ +SE P G
Sbjct: 171 LAGGVDVPYPAAHADLLDEI-AASGLVLSETPPG 203
>gi|313667412|ref|YP_004047696.1| SMF-family protein [Neisseria lactamica ST-640]
gi|313004874|emb|CBN86300.1| SMF-family protein [Neisseria lactamica 020-06]
Length = 395
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|304388917|ref|ZP_07370964.1| DNA protecting protein DprA [Neisseria meningitidis ATCC 13091]
gi|304337051|gb|EFM03238.1| DNA protecting protein DprA [Neisseria meningitidis ATCC 13091]
Length = 395
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|253579631|ref|ZP_04856900.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849132|gb|EES77093.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 305
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP NR L E I G ISE P G
Sbjct: 114 LGSGVDVCYPKSNRKLYERILWENGGIISECPLG 147
>gi|254671143|emb|CBA08189.1| DNA processing chain A [Neisseria meningitidis alpha153]
Length = 395
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|261378982|ref|ZP_05983555.1| putative DNA processing protein DprA [Neisseria cinerea ATCC 14685]
gi|269144597|gb|EEZ71015.1| putative DNA processing protein DprA [Neisseria cinerea ATCC 14685]
Length = 397
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|85705143|ref|ZP_01036243.1| DNA processing protein DprA, putative [Roseovarius sp. 217]
gi|85670465|gb|EAQ25326.1| DNA processing protein DprA, putative [Roseovarius sp. 217]
Length = 342
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I N G+ +SE P G
Sbjct: 139 MAGGVDVIYPAENSKLASDILAN-GLRLSEQPIG 171
>gi|124516263|gb|EAY57771.1| DNA processing protein DprA [Leptospirillum rubarum]
Length = 306
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +R L EEI GG +SE P G
Sbjct: 179 GLDRVYPDFHRALAEEILAKGGGIVSEFPPG 209
>gi|332976017|gb|EGK12888.1| DNA processing chain A [Psychrobacter sp. 1501(2011)]
Length = 434
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D YP +R L E I + GG ISE+ G
Sbjct: 190 MGTGIDVYYPVPHRALFERIINEGGCIISELLPG 223
>gi|291456570|ref|ZP_06595960.1| putative DNA protecting protein DprA [Bifidobacterium breve DSM
20213]
gi|291381847|gb|EFE89365.1| putative DNA protecting protein DprA [Bifidobacterium breve DSM
20213]
Length = 539
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 261 AGGLNHMGPARNRTLFERIESQGGALISELCPG 293
>gi|261337239|ref|ZP_05965123.1| DNA protecting protein DprA [Bifidobacterium gallicum DSM 20093]
gi|270277595|gb|EFA23449.1| DNA protecting protein DprA [Bifidobacterium gallicum DSM 20093]
Length = 481
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
AGGL+ + P N L E I G ISE+P
Sbjct: 275 AGGLNHIGPSTNARLFEHIQTWHGALISEMPP 306
>gi|282854572|ref|ZP_06263907.1| DNA protecting protein DprA [Propionibacterium acnes J139]
gi|282582154|gb|EFB87536.1| DNA protecting protein DprA [Propionibacterium acnes J139]
gi|314981836|gb|EFT25929.1| DNA protecting protein DprA [Propionibacterium acnes HL110PA3]
gi|315090701|gb|EFT62677.1| DNA protecting protein DprA [Propionibacterium acnes HL110PA4]
Length = 377
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G ISE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALISELPPG 210
>gi|261391654|emb|CAX49102.1| Smf protein (DNA processing chain A) [Neisseria meningitidis 8013]
Length = 395
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|319411401|emb|CBY91812.1| Smf protein (DNA processing chain A) [Neisseria meningitidis WUE
2594]
Length = 395
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|153005554|ref|YP_001379879.1| DNA protecting protein DprA [Anaeromyxobacter sp. Fw109-5]
gi|152029127|gb|ABS26895.1| DNA protecting protein DprA [Anaeromyxobacter sp. Fw109-5]
Length = 287
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D LYP NR LLE + + GG +SE+P G
Sbjct: 97 LGTGVDVLYPASNRALLERVLEQGGAILSELPDG 130
>gi|94970368|ref|YP_592416.1| DNA processing protein DprA, putative [Candidatus Koribacter
versatilis Ellin345]
gi|94552418|gb|ABF42342.1| DNA protecting protein DprA [Candidatus Koribacter versatilis
Ellin345]
Length = 385
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N+ L E+I + GG ISE P G
Sbjct: 182 GVDEIYPRANKKLAEQIVEFGGALISEFPTG 212
>gi|308388334|gb|ADO30654.1| SMF-family protein [Neisseria meningitidis alpha710]
gi|325131151|gb|EGC53872.1| putative DNA processing protein DprA [Neisseria meningitidis
OX99.30304]
gi|325137175|gb|EGC59770.1| putative DNA processing protein DprA [Neisseria meningitidis M0579]
gi|325203049|gb|ADY98503.1| putative DNA processing protein DprA [Neisseria meningitidis
M01-240149]
gi|325207153|gb|ADZ02605.1| putative DNA processing protein DprA [Neisseria meningitidis
NZ-05/33]
Length = 395
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|254420463|ref|ZP_05034187.1| DNA protecting protein DprA, putative [Brevundimonas sp. BAL3]
gi|196186640|gb|EDX81616.1| DNA protecting protein DprA, putative [Brevundimonas sp. BAL3]
Length = 356
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YPPE+ +L + D G +SE P G
Sbjct: 166 LGGGVDDIYPPEHADLYARLVDQ-GCVVSESPVG 198
>gi|296315164|ref|ZP_06865105.1| putative DNA processing protein DprA [Neisseria polysaccharea ATCC
43768]
gi|296837973|gb|EFH21911.1| putative DNA processing protein DprA [Neisseria polysaccharea ATCC
43768]
Length = 397
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|296133059|ref|YP_003640306.1| transcriptional regulator, MarR family [Thermincola sp. JR]
gi|296031637|gb|ADG82405.1| transcriptional regulator, MarR family [Thermincola potens JR]
Length = 359
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ENR L++ I + G +SE P G
Sbjct: 172 LGTGVDIVYPRENRRLMDNIITH-GAVVSEFPPG 204
>gi|325197405|gb|ADY92861.1| putative DNA processing protein DprA [Neisseria meningitidis G2136]
Length = 395
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|226306022|ref|YP_002765982.1| DNA processing protein [Rhodococcus erythropolis PR4]
gi|226185139|dbj|BAH33243.1| putative DNA processing protein [Rhodococcus erythropolis PR4]
Length = 375
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL++I + G ISE P G
Sbjct: 181 LACGVDRAYPSGHARLLKQIASS-GAVISEYPPG 213
>gi|325203235|gb|ADY98688.1| putative DNA processing protein DprA [Neisseria meningitidis
M01-240355]
Length = 395
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|317050447|ref|YP_004111563.1| DNA protecting protein DprA [Desulfurispirillum indicum S5]
gi|316945531|gb|ADU65007.1| DNA protecting protein DprA [Desulfurispirillum indicum S5]
Length = 354
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G++ +YP NR L ++I + GG I+E G
Sbjct: 156 MGCGIERVYPAGNRRLAQQIVNQGGAVITEFAPG 189
>gi|254672820|emb|CBA06971.1| DNA processing chain A [Neisseria meningitidis alpha275]
Length = 395
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|307243657|ref|ZP_07525798.1| DNA protecting protein DprA [Peptostreptococcus stomatis DSM 17678]
gi|306492967|gb|EFM64979.1| DNA protecting protein DprA [Peptostreptococcus stomatis DSM 17678]
Length = 418
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M +D +YP N NL +EI D GG+ +SE G
Sbjct: 202 MGTSIDNIYPRSNTNLFKEILDQGGLILSETGPG 235
>gi|160947178|ref|ZP_02094345.1| hypothetical protein PEPMIC_01111 [Parvimonas micra ATCC 33270]
gi|158446312|gb|EDP23307.1| hypothetical protein PEPMIC_01111 [Parvimonas micra ATCC 33270]
Length = 364
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP N L +EI +N G +SE P G
Sbjct: 173 LGCGVDIAYPKTNYRLYDEIIEN-GAVMSEFPIG 205
>gi|294084185|ref|YP_003550943.1| DNA protecting protein DprA [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663758|gb|ADE38859.1| DNA protecting protein DprA [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 367
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP EN +L + I + G+ ++E+P G
Sbjct: 164 IASGIDLVYPQENADLFDSIIER-GLLLAEMPPG 196
>gi|255067823|ref|ZP_05319678.1| DNA processing protein DprA [Neisseria sicca ATCC 29256]
gi|255047914|gb|EET43378.1| DNA processing protein DprA [Neisseria sicca ATCC 29256]
Length = 403
Score = 37.5 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPL 208
>gi|91763089|ref|ZP_01265053.1| DNA processing chain A [Candidatus Pelagibacter ubique HTCC1002]
gi|91717502|gb|EAS84153.1| DNA processing chain A [Candidatus Pelagibacter ubique HTCC1002]
Length = 306
Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP ENR L + I N GI ++E FG
Sbjct: 190 LANGLDTIYPSENRELAKNIL-NKGILLTEYTFG 222
>gi|73748517|ref|YP_307756.1| putative DNA processing protein DprA [Dehalococcoides sp. CBDB1]
gi|73660233|emb|CAI82840.1| putative DNA processing protein DprA [Dehalococcoides sp. CBDB1]
Length = 383
Score = 37.5 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN +L +I +N G ISE P G
Sbjct: 185 CGLDIIYPSENHSLARQIAEN-GALISEHPPG 215
>gi|308188322|ref|YP_003932453.1| Protein smf [Pantoea vagans C9-1]
gi|308058832|gb|ADO11004.1| Protein smf [Pantoea vagans C9-1]
Length = 374
Score = 37.5 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP + L EI GG +SE P
Sbjct: 167 LGSGLQHLYPKNHTRLAAEIVGQGGAIVSEFPL 199
>gi|325135225|gb|EGC57850.1| putative DNA processing protein DprA [Neisseria meningitidis
M13399]
Length = 397
Score = 37.5 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|156932269|ref|YP_001436185.1| DNA protecting protein DprA [Cronobacter sakazakii ATCC BAA-894]
gi|156530523|gb|ABU75349.1| hypothetical protein ESA_00040 [Cronobacter sakazakii ATCC BAA-894]
Length = 370
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP +R L EEI + GG +SE PF
Sbjct: 167 LGNGLAQVYPTRHRKLAEEIVERGGALVSEFPF 199
>gi|229491474|ref|ZP_04385298.1| transcriptional regulator, TrmB [Rhodococcus erythropolis SK121]
gi|229321759|gb|EEN87556.1| transcriptional regulator, TrmB [Rhodococcus erythropolis SK121]
Length = 375
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL++I + G ISE P G
Sbjct: 181 LACGVDRAYPSGHARLLKQIASS-GAVISEYPPG 213
>gi|190151041|ref|YP_001969566.1| protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264403|ref|ZP_07545989.1| hypothetical protein appser13_17940 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189916172|gb|ACE62424.1| Protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870219|gb|EFN01977.1| hypothetical protein appser13_17940 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 384
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|32035463|ref|ZP_00135424.1| COG0758: Predicted Rossmann fold nucleotide-binding protein
involved in DNA uptake [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209176|ref|YP_001054401.1| protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae L20]
gi|126097968|gb|ABN74796.1| Protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 384
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|332799163|ref|YP_004460662.1| DNA protecting protein DprA [Tepidanaerobacter sp. Re1]
gi|332696898|gb|AEE91355.1| DNA protecting protein DprA [Tepidanaerobacter sp. Re1]
Length = 364
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPPEN +L++EI G IS P G
Sbjct: 174 CGIDIIYPPENISLMKEIL-KCGCVISSFPLG 204
>gi|289432565|ref|YP_003462438.1| DNA protecting protein DprA [Dehalococcoides sp. GT]
gi|288946285|gb|ADC73982.1| DNA protecting protein DprA [Dehalococcoides sp. GT]
Length = 373
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN +L +I +N G ISE P G
Sbjct: 175 CGLDIIYPSENHSLARQIAEN-GALISEHPPG 205
>gi|317049805|ref|YP_004117453.1| DNA protecting protein DprA [Pantoea sp. At-9b]
gi|316951422|gb|ADU70897.1| DNA protecting protein DprA [Pantoea sp. At-9b]
Length = 374
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP ++ L +EI N G +SE P
Sbjct: 167 LGSGLKHLYPKIHQKLAQEIISNDGALVSEFPL 199
>gi|225568716|ref|ZP_03777741.1| hypothetical protein CLOHYLEM_04795 [Clostridium hylemonae DSM
15053]
gi|225162215|gb|EEG74834.1| hypothetical protein CLOHYLEM_04795 [Clostridium hylemonae DSM
15053]
Length = 362
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP E+ L +I +GG +SE P G
Sbjct: 171 LGCGVDVCYPREHIGLYMDIQKHGG-ILSEYPPG 203
>gi|325145438|gb|EGC67714.1| putative DNA processing protein DprA [Neisseria meningitidis
M01-240013]
gi|325205209|gb|ADZ00662.1| putative DNA processing protein DprA [Neisseria meningitidis
M04-240196]
Length = 397
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPIG 209
>gi|240129161|ref|ZP_04741822.1| DprA [Neisseria gonorrhoeae SK-93-1035]
gi|268687544|ref|ZP_06154406.1| DNA processing chain A [Neisseria gonorrhoeae SK-93-1035]
gi|268627828|gb|EEZ60228.1| DNA processing chain A [Neisseria gonorrhoeae SK-93-1035]
Length = 398
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|240118948|ref|ZP_04733010.1| DprA [Neisseria gonorrhoeae PID1]
Length = 398
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|240081714|ref|ZP_04726257.1| DprA [Neisseria gonorrhoeae FA19]
gi|268597812|ref|ZP_06131979.1| DNA processing chain A [Neisseria gonorrhoeae FA19]
gi|268604659|ref|ZP_06138826.1| DNA processing chain A [Neisseria gonorrhoeae PID1]
gi|268551600|gb|EEZ46619.1| DNA processing chain A [Neisseria gonorrhoeae FA19]
gi|268588790|gb|EEZ53466.1| DNA processing chain A [Neisseria gonorrhoeae PID1]
Length = 395
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|165977147|ref|YP_001652740.1| Smf protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165877248|gb|ABY70296.1| Smf protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 384
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|149915652|ref|ZP_01904178.1| DNA processing protein DprA, putative [Roseobacter sp. AzwK-3b]
gi|149810544|gb|EDM70387.1| DNA processing protein DprA, putative [Roseobacter sp. AzwK-3b]
Length = 357
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP EN L ++I G+ +SE P G
Sbjct: 155 MAGGVDVPYPAENARLADDI-TRSGLRLSEQPMG 187
>gi|59802185|ref|YP_208897.1| hypothetical protein NGO1865 [Neisseria gonorrhoeae FA 1090]
gi|293398230|ref|ZP_06642435.1| DNA processing protein [Neisseria gonorrhoeae F62]
gi|59719080|gb|AAW90485.1| putative DNA processing chain A [Neisseria gonorrhoeae FA 1090]
gi|291611493|gb|EFF40563.1| DNA processing protein [Neisseria gonorrhoeae F62]
Length = 395
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|307246636|ref|ZP_07528707.1| hypothetical protein appser1_18320 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307251006|ref|ZP_07532931.1| hypothetical protein appser4_17690 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307255621|ref|ZP_07537426.1| hypothetical protein appser9_18460 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260072|ref|ZP_07541784.1| hypothetical protein appser11_18580 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852508|gb|EFM84742.1| hypothetical protein appser1_18320 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856946|gb|EFM89077.1| hypothetical protein appser4_17690 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861470|gb|EFM93459.1| hypothetical protein appser9_18460 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865908|gb|EFM97784.1| hypothetical protein appser11_18580 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 384
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|288575792|ref|ZP_06393972.1| DNA protecting protein DprA [Neisseria mucosa ATCC 25996]
gi|288566999|gb|EFC88559.1| DNA protecting protein DprA [Neisseria mucosa ATCC 25996]
Length = 355
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPL 208
>gi|325963549|ref|YP_004241455.1| DNA protecting protein DprA [Arthrobacter phenanthrenivorans Sphe3]
gi|323469636|gb|ADX73321.1| DNA protecting protein DprA [Arthrobacter phenanthrenivorans Sphe3]
Length = 343
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G+D YP +R LLE + D G+ +SE+P G
Sbjct: 185 MANGVDRPYPMGHRELLERVAD-LGLMVSEVPPG 217
>gi|303249954|ref|ZP_07336156.1| protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303253126|ref|ZP_07339275.1| protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248764|ref|ZP_07530777.1| hypothetical protein appser2_17300 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307253383|ref|ZP_07535254.1| hypothetical protein appser6_18770 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307262202|ref|ZP_07543852.1| hypothetical protein appser12_17470 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|302647808|gb|EFL78015.1| protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651017|gb|EFL81171.1| protein smf (DNA-processing chain A) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854691|gb|EFM86881.1| hypothetical protein appser2_17300 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306859062|gb|EFM91104.1| hypothetical protein appser6_18770 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306868076|gb|EFM99902.1| hypothetical protein appser12_17470 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 384
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|240116726|ref|ZP_04730788.1| DprA [Neisseria gonorrhoeae PID18]
gi|268602397|ref|ZP_06136564.1| DNA processing chain A [Neisseria gonorrhoeae PID18]
gi|268586528|gb|EEZ51204.1| DNA processing chain A [Neisseria gonorrhoeae PID18]
Length = 398
Score = 37.5 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|194099892|ref|YP_002003029.1| DprA [Neisseria gonorrhoeae NCCP11945]
gi|240015122|ref|ZP_04722035.1| DprA [Neisseria gonorrhoeae DGI18]
gi|240017572|ref|ZP_04724112.1| DprA [Neisseria gonorrhoeae FA6140]
gi|240113990|ref|ZP_04728480.1| DprA [Neisseria gonorrhoeae MS11]
gi|240122193|ref|ZP_04735155.1| DprA [Neisseria gonorrhoeae PID24-1]
gi|268600055|ref|ZP_06134222.1| DNA processing chain A [Neisseria gonorrhoeae MS11]
gi|193935182|gb|ACF31006.1| DprA [Neisseria gonorrhoeae NCCP11945]
gi|268584186|gb|EEZ48862.1| DNA processing chain A [Neisseria gonorrhoeae MS11]
Length = 398
Score = 37.5 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|254494747|ref|ZP_05107918.1| DNA processing chain A [Neisseria gonorrhoeae 1291]
gi|226513787|gb|EEH63132.1| DNA processing chain A [Neisseria gonorrhoeae 1291]
Length = 395
Score = 37.5 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|119960903|ref|YP_948169.1| DNA protecting protein DprA [Arthrobacter aurescens TC1]
gi|119947762|gb|ABM06673.1| DNA protecting protein DprA [Arthrobacter aurescens TC1]
Length = 411
Score = 37.5 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP N +LL + G ISE+P G
Sbjct: 214 MAGGVDRFYPSGNEDLLRAVATQ-GAVISEVPPG 246
>gi|325138795|gb|EGC61347.1| putative DNA processing protein DprA [Neisseria meningitidis
ES14902]
Length = 395
Score = 37.5 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|260439513|ref|ZP_05793329.1| DprA [Neisseria gonorrhoeae DGI2]
gi|291042750|ref|ZP_06568491.1| DNA protecting protein DprA [Neisseria gonorrhoeae DGI2]
gi|291013184|gb|EFE05150.1| DNA protecting protein DprA [Neisseria gonorrhoeae DGI2]
Length = 395
Score = 37.5 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|239917443|ref|YP_002957001.1| DNA protecting protein DprA [Micrococcus luteus NCTC 2665]
gi|239838650|gb|ACS30447.1| DNA protecting protein DprA [Micrococcus luteus NCTC 2665]
Length = 424
Score = 37.5 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP + +LL + G+ +SE+P G
Sbjct: 222 LAGGLDRFYPAGHEDLLRAVMA-AGLLVSEMPPG 254
>gi|240124645|ref|ZP_04737531.1| DprA [Neisseria gonorrhoeae SK-92-679]
gi|268683219|ref|ZP_06150081.1| DNA processing chain A [Neisseria gonorrhoeae SK-92-679]
gi|268623503|gb|EEZ55903.1| DNA processing chain A [Neisseria gonorrhoeae SK-92-679]
Length = 397
Score = 37.5 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|239997897|ref|ZP_04717821.1| DprA [Neisseria gonorrhoeae 35/02]
Length = 398
Score = 37.5 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|240124486|ref|ZP_04737442.1| DprA [Neisseria gonorrhoeae PID332]
gi|317165352|gb|ADV08893.1| DprA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 398
Score = 37.5 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 183 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 212
>gi|212716957|ref|ZP_03325085.1| hypothetical protein BIFCAT_01903 [Bifidobacterium catenulatum DSM
16992]
gi|212660242|gb|EEB20817.1| hypothetical protein BIFCAT_01903 [Bifidobacterium catenulatum DSM
16992]
Length = 455
Score = 37.5 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P N L E I + G ISE+ G
Sbjct: 237 AGGLNHIGPKSNERLFETIISHSGALISELCPG 269
>gi|268593749|ref|ZP_06127916.1| DNA processing chain A [Neisseria gonorrhoeae 35/02]
gi|268547138|gb|EEZ42556.1| DNA processing chain A [Neisseria gonorrhoeae 35/02]
Length = 395
Score = 37.5 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|322513217|ref|ZP_08066343.1| DNA-processing protein Smf [Actinobacillus ureae ATCC 25976]
gi|322120993|gb|EFX92834.1| DNA-processing protein Smf [Actinobacillus ureae ATCC 25976]
Length = 384
Score = 37.5 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|307822753|ref|ZP_07652984.1| DNA protecting protein DprA [Methylobacter tundripaludum SV96]
gi|307736357|gb|EFO07203.1| DNA protecting protein DprA [Methylobacter tundripaludum SV96]
Length = 350
Score = 37.5 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +++L EI N G ISE P G
Sbjct: 162 GLDRVYPARHKDLATEIV-NTGAMISEFPPG 191
>gi|268683117|ref|ZP_06149979.1| DNA processing chain A [Neisseria gonorrhoeae PID332]
gi|268623401|gb|EEZ55801.1| DNA processing chain A [Neisseria gonorrhoeae PID332]
Length = 395
Score = 37.5 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|307257797|ref|ZP_07539554.1| hypothetical protein appser10_17820 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863703|gb|EFM95629.1| hypothetical protein appser10_17820 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 384
Score = 37.5 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLDQVYPARHKKLAEQIVESGGALVSE 197
>gi|206603104|gb|EDZ39584.1| DNA processing protein DprA [Leptospirillum sp. Group II '5-way
CG']
Length = 306
Score = 37.5 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +R L EI GG +SE P G
Sbjct: 179 GLDRVYPDFHRTLAGEILSGGGCIVSEFPPG 209
>gi|297617128|ref|YP_003702287.1| DNA protecting protein DprA [Syntrophothermus lipocalidus DSM
12680]
gi|297144965|gb|ADI01722.1| DNA protecting protein DprA [Syntrophothermus lipocalidus DSM
12680]
Length = 366
Score = 37.5 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L I G+ +SE P G
Sbjct: 173 LGSGIDVVYPRENKGLYSRI-AETGVVVSEFPPG 205
>gi|253583758|ref|ZP_04860956.1| smf protein [Fusobacterium varium ATCC 27725]
gi|251834330|gb|EES62893.1| smf protein [Fusobacterium varium ATCC 27725]
Length = 352
Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP ENR L E I + G+ ISE P G
Sbjct: 169 GLDVIYPKENRILWENI-EKSGLIISEYPLG 198
>gi|281414066|ref|ZP_06245808.1| DNA protecting protein DprA [Micrococcus luteus NCTC 2665]
Length = 319
Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP + +LL + G+ +SE+P G
Sbjct: 117 LAGGLDRFYPAGHEDLLRAVMA-AGLLVSEMPPG 149
>gi|225375312|ref|ZP_03752533.1| hypothetical protein ROSEINA2194_00937 [Roseburia inulinivorans DSM
16841]
gi|225212801|gb|EEG95155.1| hypothetical protein ROSEINA2194_00937 [Roseburia inulinivorans DSM
16841]
Length = 359
Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ YP N+ L E+I +GG ISE P
Sbjct: 169 LGCGVNICYPRTNQKLYEDILSHGG-IISEYPP 200
>gi|88801029|ref|ZP_01116578.1| DNA processing chain A [Reinekea sp. MED297]
gi|88776232|gb|EAR07458.1| DNA processing chain A [Reinekea sp. MED297]
Length = 368
Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP NR L E+I G +SE P G
Sbjct: 176 LGCGIDVIYPKNNRQLFEDI-ARDGCLVSEYPLG 208
>gi|119025612|ref|YP_909457.1| hypothetical protein BAD_0594 [Bifidobacterium adolescentis ATCC
15703]
gi|118765196|dbj|BAF39375.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 434
Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P N+NL E+I + G ISE+ G
Sbjct: 228 AGGLNHIGPKSNQNLFEQIESHSGALISELCPG 260
>gi|206890890|ref|YP_002248891.1| DNA processing protein DprA [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742828|gb|ACI21885.1| DNA processing protein DprA [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 368
Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G+ C+YPPEN+ L E+I N G ISE
Sbjct: 174 LGSGVSCIYPPENKMLAEKIIKN-GAIISE 202
>gi|188535242|ref|YP_001909039.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Erwinia tasmaniensis Et1/99]
gi|188030284|emb|CAO98173.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Erwinia tasmaniensis Et1/99]
Length = 374
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GLD +YP +++ L ++I D GG +SE P
Sbjct: 167 LGSGLDAIYPRQHQFLAQQIIDCGGALVSEFPL 199
>gi|78044382|ref|YP_360615.1| putative DNA proccessing protein DprA [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996497|gb|ABB15396.1| putative DNA proccessing protein DprA [Carboxydothermus
hydrogenoformans Z-2901]
Length = 358
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN NL EI G+ ISE G
Sbjct: 168 LGSGIDVPYPRENENLYREII-QKGLIISEFLPG 200
>gi|15676044|ref|NP_273174.1| DNA processing chain A [Neisseria meningitidis MC58]
gi|7225332|gb|AAF40575.1| DNA processing chain A [Neisseria meningitidis MC58]
gi|316985962|gb|EFV64901.1| DNA protecting protein DprA [Neisseria meningitidis H44/76]
gi|325141261|gb|EGC63760.1| putative DNA processing protein DprA [Neisseria meningitidis CU385]
gi|325199330|gb|ADY94785.1| putative DNA processing protein DprA [Neisseria meningitidis
H44/76]
Length = 397
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPVNKNLAYEI-AEKGLIVSEFPIG 209
>gi|15639384|ref|NP_218833.1| smf protein (smf) [Treponema pallidum subsp. pallidum str. Nichols]
gi|189025626|ref|YP_001933398.1| protein Smf [Treponema pallidum subsp. pallidum SS14]
gi|3322671|gb|AAC65377.1| smf protein (smf) [Treponema pallidum subsp. pallidum str. Nichols]
gi|189018201|gb|ACD70819.1| protein Smf [Treponema pallidum subsp. pallidum SS14]
gi|291059783|gb|ADD72518.1| DNA protecting protein DprA [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 302
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+A G+D LYP N L I + GG +SE
Sbjct: 178 LACGVDQLYPRSNSALAARIIETGGCILSEY 208
>gi|299771933|ref|YP_003733959.1| Rossmann fold nucleotide-binding protein [Acinetobacter sp. DR1]
gi|298702021|gb|ADI92586.1| Rossmann fold nucleotide-binding protein [Acinetobacter sp. DR1]
Length = 377
Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E+I G I+E G
Sbjct: 182 GLDSTYPAQNKKLAEQILAQNGAIITEFLPG 212
>gi|154487075|ref|ZP_02028482.1| hypothetical protein BIFADO_00915 [Bifidobacterium adolescentis
L2-32]
gi|154084938|gb|EDN83983.1| hypothetical protein BIFADO_00915 [Bifidobacterium adolescentis
L2-32]
Length = 434
Score = 37.1 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P N+NL E+I + G ISE+ G
Sbjct: 228 AGGLNHIGPKSNQNLFEQIESHSGALISELCPG 260
>gi|50955103|ref|YP_062391.1| DNA processing factor [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951585|gb|AAT89286.1| DNA processing factor [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 411
Score = 37.1 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D LYP N LL I + G+ ++E+P G
Sbjct: 225 LAGGADRLYPAANTELLTRILAS-GLILAELPPG 257
>gi|167855660|ref|ZP_02478418.1| Protein smf (DNA-processing chain A) [Haemophilus parasuis 29755]
gi|167853232|gb|EDS24488.1| Protein smf (DNA-processing chain A) [Haemophilus parasuis 29755]
Length = 375
Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I D G +SE
Sbjct: 169 LGSGLDQVYPARHKKLAEQIVDTSGALVSE 198
>gi|237736954|ref|ZP_04567435.1| topoisomerase [Fusobacterium mortiferum ATCC 9817]
gi|229420816|gb|EEO35863.1| topoisomerase [Fusobacterium mortiferum ATCC 9817]
Length = 356
Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP ENR + EEI G+ +SE P G
Sbjct: 172 GLDIIYPYENRKIWEEI-GEKGLLLSEYPMG 201
>gi|309378540|emb|CBX22812.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 397
Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|269836418|ref|YP_003318646.1| DNA protecting protein DprA [Sphaerobacter thermophilus DSM 20745]
gi|269785681|gb|ACZ37824.1| DNA protecting protein DprA [Sphaerobacter thermophilus DSM 20745]
Length = 359
Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPPE+R L E++ G +SE P G
Sbjct: 171 LGSGVDVIYPPEHRQLAEQV-AQQGALVSEFPLG 203
>gi|261400041|ref|ZP_05986166.1| putative DNA processing protein DprA [Neisseria lactamica ATCC
23970]
gi|269210264|gb|EEZ76719.1| putative DNA processing protein DprA [Neisseria lactamica ATCC
23970]
Length = 397
Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+NL EI G+ +SE P G
Sbjct: 180 GIDRIYPPANKNLAYEI-AEKGLIVSEFPIG 209
>gi|146280420|ref|YP_001170573.1| DNA processing protein DprA, putative [Pseudomonas stutzeri A1501]
gi|145568625|gb|ABP77731.1| DNA processing protein DprA, putative [Pseudomonas stutzeri A1501]
Length = 365
Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ LYP + +L +EI ++GG +SE+P
Sbjct: 176 LGTGIERLYPQRHLSLAKEIVEHGGALVSELPL 208
>gi|327446261|gb|EGE92915.1| DNA protecting protein DprA [Propionibacterium acnes HL013PA2]
Length = 311
Score = 37.1 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|294789444|ref|ZP_06754681.1| putative DNA processing protein DprA [Simonsiella muelleri ATCC
29453]
gi|294482657|gb|EFG30347.1| putative DNA processing protein DprA [Simonsiella muelleri ATCC
29453]
Length = 421
Score = 37.1 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP EN+ L +I G+ +SE P G
Sbjct: 178 GIDRIYPNENKKLAYQI-AEKGLIVSEFPLG 207
>gi|327478636|gb|AEA81946.1| DNA processing protein DprA, putative [Pseudomonas stutzeri DSM
4166]
Length = 365
Score = 37.1 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ LYP + +L +EI ++GG +SE+P
Sbjct: 176 LGTGIERLYPQRHLSLAKEIVEHGGALVSELPL 208
>gi|291517057|emb|CBK70673.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Bifidobacterium longum subsp. longum F8]
Length = 514
Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 204 AGGLNHIGPMRNRTLFERIETQGGALISELCPG 236
>gi|163816842|ref|ZP_02208205.1| hypothetical protein COPEUT_03032 [Coprococcus eutactus ATCC 27759]
gi|158448099|gb|EDP25094.1| hypothetical protein COPEUT_03032 [Coprococcus eutactus ATCC 27759]
Length = 360
Score = 37.1 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G++ YP EN ++ I + GG+ +SE
Sbjct: 173 LGSGINVPYPRENYDIYRSIVNGGGVVVSE 202
>gi|323701838|ref|ZP_08113508.1| DNA protecting protein DprA [Desulfotomaculum nigrificans DSM 574]
gi|323533142|gb|EGB23011.1| DNA protecting protein DprA [Desulfotomaculum nigrificans DSM 574]
Length = 363
Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D +YP EN L+++I + G ISE P G
Sbjct: 172 LGCGPDVVYPKENARLMDKIIEQ-GAVISEFPPG 204
>gi|309811480|ref|ZP_07705262.1| DNA protecting protein DprA [Dermacoccus sp. Ellin185]
gi|308434531|gb|EFP58381.1| DNA protecting protein DprA [Dermacoccus sp. Ellin185]
Length = 438
Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YP + L I G+ +SE+P G
Sbjct: 243 VAGGVDRVYPTAHEELFARI-RERGVIVSEMPLG 275
>gi|83954521|ref|ZP_00963232.1| DNA processing protein DprA, putative [Sulfitobacter sp. NAS-14.1]
gi|83840805|gb|EAP79976.1| DNA processing protein DprA, putative [Sulfitobacter sp. NAS-14.1]
Length = 365
Score = 37.1 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L ++I G+ ISE P G
Sbjct: 170 AGGVDVIYPVENTTLAQDIAAQ-GLRISEQPMG 201
>gi|313829531|gb|EFS67245.1| DNA protecting protein DprA [Propionibacterium acnes HL063PA2]
Length = 377
Score = 37.1 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|326333663|ref|ZP_08199900.1| DNA protecting protein DprA [Nocardioidaceae bacterium Broad-1]
gi|325948569|gb|EGD40672.1| DNA protecting protein DprA [Nocardioidaceae bacterium Broad-1]
Length = 390
Score = 37.1 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP NR LL+ I G ISEI G
Sbjct: 191 LAGGVDVPYPLRNRRLLDAI-AESGAVISEIAPG 223
>gi|322688898|ref|YP_004208632.1| hypothetical protein BLIF_0711 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460234|dbj|BAJ70854.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 550
Score = 36.7 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 240 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 272
>gi|227545995|ref|ZP_03976044.1| possible Rossmann fold nucleotide-binding protein involved in DNA
uptake [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|322690873|ref|YP_004220443.1| hypothetical protein BLLJ_0683 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|227213629|gb|EEI81478.1| possible Rossmann fold nucleotide-binding protein involved in DNA
uptake [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|320455729|dbj|BAJ66351.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 566
Score = 36.7 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 256 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 288
>gi|121533773|ref|ZP_01665600.1| DNA protecting protein DprA [Thermosinus carboxydivorans Nor1]
gi|121307764|gb|EAX48679.1| DNA protecting protein DprA [Thermosinus carboxydivorans Nor1]
Length = 282
Score = 36.7 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YPPEN +L EI + GG ISE G
Sbjct: 91 LGCGVDVCYPPENAKILAEIAETGG-IISEYAPG 123
>gi|297570259|ref|YP_003691603.1| DNA protecting protein DprA [Desulfurivibrio alkaliphilus AHT2]
gi|296926174|gb|ADH86984.1| DNA protecting protein DprA [Desulfurivibrio alkaliphilus AHT2]
Length = 381
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPP+N+ L +I G+ +SE P G
Sbjct: 178 LGCGLDVVYPPQNKKLFAKI-AATGMLLSEYPPG 210
>gi|197123196|ref|YP_002135147.1| DNA protecting protein DprA [Anaeromyxobacter sp. K]
gi|196173045|gb|ACG74018.1| DNA protecting protein DprA [Anaeromyxobacter sp. K]
Length = 312
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ++R L E I + GG +SE+P G
Sbjct: 120 LGTGVDVVYPRQHRALFERIVEAGGALVSELPDG 153
>gi|78222110|ref|YP_383857.1| SMF protein [Geobacter metallireducens GS-15]
gi|78193365|gb|ABB31132.1| DNA protecting protein DprA [Geobacter metallireducens GS-15]
Length = 358
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ENR L E+ + G +SE P G
Sbjct: 170 LGCGVDVVYPAENRQLFREMAEQ-GAVVSEFPLG 202
>gi|83943948|ref|ZP_00956405.1| DNA processing protein DprA, putative [Sulfitobacter sp. EE-36]
gi|83845195|gb|EAP83075.1| DNA processing protein DprA, putative [Sulfitobacter sp. EE-36]
Length = 365
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L ++I G+ ISE P G
Sbjct: 170 AGGVDVIYPVENTTLAQDIAAQ-GLRISEQPMG 201
>gi|322382312|ref|ZP_08056219.1| DNA processing Smf single strand binding protein-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153665|gb|EFX46040.1| DNA processing Smf single strand binding protein-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 281
Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D +YPPEN L +I G+ +SE+P G
Sbjct: 166 LGGPADKIYPPENGQLYRQI-AESGLILSEVPVG 198
>gi|317482280|ref|ZP_07941301.1| DNA recombination-mediator protein A [Bifidobacterium sp.
12_1_47BFAA]
gi|316916296|gb|EFV37697.1| DNA recombination-mediator protein A [Bifidobacterium sp.
12_1_47BFAA]
Length = 550
Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 240 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 272
>gi|23465510|ref|NP_696113.1| hypothetical protein BL0937 [Bifidobacterium longum NCC2705]
gi|23326169|gb|AAN24749.1| hypothetical protein with partial similarity to smf DNA processing
protein [Bifidobacterium longum NCC2705]
Length = 566
Score = 36.7 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 256 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 288
>gi|254491244|ref|ZP_05104425.1| DNA protecting protein DprA, putative [Methylophaga thiooxidans
DMS010]
gi|224463757|gb|EEF80025.1| DNA protecting protein DprA, putative [Methylophaga thiooxydans
DMS010]
Length = 345
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP ++R L +I N G +SE P G
Sbjct: 149 VATGLDRVYPAQHRQLAHDIAAN-GAIVSEFPLG 181
>gi|313813527|gb|EFS51241.1| DNA protecting protein DprA [Propionibacterium acnes HL025PA1]
Length = 377
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|312132950|ref|YP_004000289.1| smf [Bifidobacterium longum subsp. longum BBMN68]
gi|311773931|gb|ADQ03419.1| Smf [Bifidobacterium longum subsp. longum BBMN68]
Length = 514
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 204 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 236
>gi|157372743|ref|YP_001480732.1| DNA protecting protein DprA [Serratia proteamaculans 568]
gi|157324507|gb|ABV43604.1| DNA protecting protein DprA [Serratia proteamaculans 568]
Length = 373
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLD +YP +R L E I +NGG ISE
Sbjct: 167 LGSGLDNIYPRRHRRLAERIVENGGALISEY 197
>gi|311113475|ref|YP_003984697.1| DNA protecting protein DprA [Rothia dentocariosa ATCC 17931]
gi|310944969|gb|ADP41263.1| DNA protecting protein DprA [Rothia dentocariosa ATCC 17931]
Length = 494
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD YP +N +L I + G+ +SE+ G
Sbjct: 290 MAGGLDHFYPVQNSEILHRIVEE-GLILSEVSIG 322
>gi|289427793|ref|ZP_06429504.1| DNA protecting protein DprA [Propionibacterium acnes J165]
gi|289159057|gb|EFD07250.1| DNA protecting protein DprA [Propionibacterium acnes J165]
gi|313763675|gb|EFS35039.1| DNA protecting protein DprA [Propionibacterium acnes HL013PA1]
gi|313801455|gb|EFS42706.1| DNA protecting protein DprA [Propionibacterium acnes HL110PA2]
gi|313807865|gb|EFS46346.1| DNA protecting protein DprA [Propionibacterium acnes HL087PA2]
gi|313811664|gb|EFS49378.1| DNA protecting protein DprA [Propionibacterium acnes HL083PA1]
gi|313816850|gb|EFS54564.1| DNA protecting protein DprA [Propionibacterium acnes HL059PA1]
gi|313819650|gb|EFS57364.1| DNA protecting protein DprA [Propionibacterium acnes HL046PA2]
gi|313822245|gb|EFS59959.1| DNA protecting protein DprA [Propionibacterium acnes HL036PA1]
gi|313823522|gb|EFS61236.1| DNA protecting protein DprA [Propionibacterium acnes HL036PA2]
gi|313825850|gb|EFS63564.1| DNA protecting protein DprA [Propionibacterium acnes HL063PA1]
gi|313831405|gb|EFS69119.1| DNA protecting protein DprA [Propionibacterium acnes HL007PA1]
gi|313835017|gb|EFS72731.1| DNA protecting protein DprA [Propionibacterium acnes HL056PA1]
gi|313839826|gb|EFS77540.1| DNA protecting protein DprA [Propionibacterium acnes HL086PA1]
gi|314914677|gb|EFS78508.1| DNA protecting protein DprA [Propionibacterium acnes HL005PA4]
gi|314919210|gb|EFS83041.1| DNA protecting protein DprA [Propionibacterium acnes HL050PA1]
gi|314920880|gb|EFS84711.1| DNA protecting protein DprA [Propionibacterium acnes HL050PA3]
gi|314924577|gb|EFS88408.1| DNA protecting protein DprA [Propionibacterium acnes HL036PA3]
gi|314930448|gb|EFS94279.1| DNA protecting protein DprA [Propionibacterium acnes HL067PA1]
gi|314954499|gb|EFS98905.1| DNA protecting protein DprA [Propionibacterium acnes HL027PA1]
gi|314957379|gb|EFT01482.1| DNA protecting protein DprA [Propionibacterium acnes HL002PA1]
gi|314961998|gb|EFT06099.1| DNA protecting protein DprA [Propionibacterium acnes HL002PA2]
gi|314963577|gb|EFT07677.1| DNA protecting protein DprA [Propionibacterium acnes HL082PA1]
gi|314968590|gb|EFT12688.1| DNA protecting protein DprA [Propionibacterium acnes HL037PA1]
gi|314974280|gb|EFT18376.1| DNA protecting protein DprA [Propionibacterium acnes HL053PA1]
gi|314976715|gb|EFT20810.1| DNA protecting protein DprA [Propionibacterium acnes HL045PA1]
gi|314984417|gb|EFT28509.1| DNA protecting protein DprA [Propionibacterium acnes HL005PA1]
gi|314986433|gb|EFT30525.1| DNA protecting protein DprA [Propionibacterium acnes HL005PA2]
gi|314990793|gb|EFT34884.1| DNA protecting protein DprA [Propionibacterium acnes HL005PA3]
gi|315079433|gb|EFT51426.1| DNA protecting protein DprA [Propionibacterium acnes HL053PA2]
gi|315081341|gb|EFT53317.1| DNA protecting protein DprA [Propionibacterium acnes HL078PA1]
gi|315083542|gb|EFT55518.1| DNA protecting protein DprA [Propionibacterium acnes HL027PA2]
gi|315087222|gb|EFT59198.1| DNA protecting protein DprA [Propionibacterium acnes HL002PA3]
gi|315095251|gb|EFT67227.1| DNA protecting protein DprA [Propionibacterium acnes HL038PA1]
gi|315099301|gb|EFT71277.1| DNA protecting protein DprA [Propionibacterium acnes HL059PA2]
gi|315100523|gb|EFT72499.1| DNA protecting protein DprA [Propionibacterium acnes HL046PA1]
gi|315106705|gb|EFT78681.1| DNA protecting protein DprA [Propionibacterium acnes HL030PA1]
gi|315108930|gb|EFT80906.1| DNA protecting protein DprA [Propionibacterium acnes HL030PA2]
gi|327328319|gb|EGE70081.1| DNA processing / uptake protein [Propionibacterium acnes HL096PA2]
gi|327329816|gb|EGE71572.1| DNA processing / uptake protein [Propionibacterium acnes HL096PA3]
gi|327444344|gb|EGE90998.1| DNA protecting protein DprA [Propionibacterium acnes HL043PA2]
gi|327455053|gb|EGF01708.1| DNA protecting protein DprA [Propionibacterium acnes HL087PA3]
gi|327457659|gb|EGF04314.1| DNA protecting protein DprA [Propionibacterium acnes HL083PA2]
gi|328752257|gb|EGF65873.1| DNA protecting protein DprA [Propionibacterium acnes HL020PA1]
gi|328755116|gb|EGF68732.1| DNA protecting protein DprA [Propionibacterium acnes HL087PA1]
gi|328758105|gb|EGF71721.1| DNA protecting protein DprA [Propionibacterium acnes HL025PA2]
gi|328760131|gb|EGF73709.1| DNA processing / uptake protein [Propionibacterium acnes HL099PA1]
gi|332675846|gb|AEE72662.1| DNA processing / uptake protein [Propionibacterium acnes 266]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|262197810|ref|YP_003269019.1| SMF family protein [Haliangium ochraceum DSM 14365]
gi|262081157|gb|ACY17126.1| SMF family protein [Haliangium ochraceum DSM 14365]
Length = 297
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G+D +YP +R L E+ +GG ISE P
Sbjct: 107 LGCGIDVVYPARHRALYHEVCASGGALISEFP 138
>gi|254428234|ref|ZP_05041941.1| DNA protecting protein DprA, putative [Alcanivorax sp. DG881]
gi|196194403|gb|EDX89362.1| DNA protecting protein DprA, putative [Alcanivorax sp. DG881]
Length = 353
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G DC+YPP + L +I + GG +SE G
Sbjct: 165 MGSGPDCIYPPRHGLLASQIVEAGGALVSEFAPG 198
>gi|160880855|ref|YP_001559823.1| DNA protecting protein DprA [Clostridium phytofermentans ISDg]
gi|160429521|gb|ABX43084.1| DNA protecting protein DprA [Clostridium phytofermentans ISDg]
Length = 369
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP EN L +E+ +GG +SE P G
Sbjct: 178 GLDLCYPRENYGLYQEVNLHGG-ILSEYPIG 207
>gi|20807897|ref|NP_623068.1| Rossmann-fold nucleotide-binding protein involved in DNA uptake
[Thermoanaerobacter tengcongensis MB4]
gi|254479480|ref|ZP_05092805.1| DNA protecting protein DprA, putative [Carboxydibrachium pacificum
DSM 12653]
gi|20516463|gb|AAM24672.1| predicted Rossmann-fold nucleotide-binding protein involved in DNA
uptake [Thermoanaerobacter tengcongensis MB4]
gi|214034584|gb|EEB75333.1| DNA protecting protein DprA, putative [Carboxydibrachium pacificum
DSM 12653]
Length = 362
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGCGINVVYPTENKKLMEQI-GEEGLLVSEYPL 202
>gi|329851389|ref|ZP_08266146.1| DNA protecting protein DprA [Asticcacaulis biprosthecum C19]
gi|328840235|gb|EGF89807.1| DNA protecting protein DprA [Asticcacaulis biprosthecum C19]
Length = 372
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YPP+N L + + + G+ +SE P G
Sbjct: 172 LGGGIDDVYPPDNAALYQRLREQ-GLLVSESPVG 204
>gi|327445018|gb|EGE91672.1| DNA protecting protein DprA [Propionibacterium acnes HL043PA1]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|229826296|ref|ZP_04452365.1| hypothetical protein GCWU000182_01668 [Abiotrophia defectiva ATCC
49176]
gi|229789166|gb|EEP25280.1| hypothetical protein GCWU000182_01668 [Abiotrophia defectiva ATCC
49176]
Length = 366
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D YPP N L I + GG+ ISE P G
Sbjct: 174 LGCGADVCYPPNNIELYLSIIEKGGV-ISEFPLG 206
>gi|46190458|ref|ZP_00206472.1| COG0758: Predicted Rossmann fold nucleotide-binding protein
involved in DNA uptake [Bifidobacterium longum DJO10A]
gi|189439541|ref|YP_001954622.1| putative DNA uptake protein [Bifidobacterium longum DJO10A]
gi|189427976|gb|ACD98124.1| Putative DNA uptake protein [Bifidobacterium longum DJO10A]
Length = 514
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 204 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 236
>gi|331007628|ref|ZP_08330770.1| Rossmann fold nucleotide-binding protein [gamma proteobacterium
IMCC1989]
gi|330418568|gb|EGG93092.1| Rossmann fold nucleotide-binding protein [gamma proteobacterium
IMCC1989]
Length = 391
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MA G++ +YP ++NL E+I ++GG+ I+E P
Sbjct: 194 MATGINSVYPKRHQNLAEQIVEDGGVLITEFPP 226
>gi|239621949|ref|ZP_04664980.1| DNA protecting protein DprA [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|239515140|gb|EEQ55007.1| DNA protecting protein DprA [Bifidobacterium longum subsp. infantis
CCUG 52486]
Length = 514
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 204 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 236
>gi|149200840|ref|ZP_01877815.1| DNA processing protein DprA, putative [Roseovarius sp. TM1035]
gi|149145173|gb|EDM33199.1| DNA processing protein DprA, putative [Roseovarius sp. TM1035]
Length = 356
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I + G+ +SE P G
Sbjct: 159 MAGGVDVIYPAENTKLAGDILAS-GLRLSEQPIG 191
>gi|314978802|gb|EFT22896.1| DNA protecting protein DprA [Propionibacterium acnes HL072PA2]
gi|315089395|gb|EFT61371.1| DNA protecting protein DprA [Propionibacterium acnes HL072PA1]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|50842909|ref|YP_056136.1| DNA processing / uptake protein [Propionibacterium acnes KPA171202]
gi|50840511|gb|AAT83178.1| DNA processing / uptake protein [Propionibacterium acnes KPA171202]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|319639529|ref|ZP_07994276.1| SMF-family protein [Neisseria mucosa C102]
gi|317399100|gb|EFV79774.1| SMF-family protein [Neisseria mucosa C102]
Length = 396
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AEKGLIVSEFPL 208
>gi|313794068|gb|EFS42092.1| DNA protecting protein DprA [Propionibacterium acnes HL110PA1]
gi|327451913|gb|EGE98567.1| DNA protecting protein DprA [Propionibacterium acnes HL092PA1]
Length = 376
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|303240294|ref|ZP_07326813.1| DNA protecting protein DprA [Acetivibrio cellulolyticus CD2]
gi|302592204|gb|EFL61933.1| DNA protecting protein DprA [Acetivibrio cellulolyticus CD2]
Length = 369
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN+ L+E I +N G +SE G
Sbjct: 172 LGCGLDIVYPYENKKLMENIIEN-GACLSEFLPG 204
>gi|295130966|ref|YP_003581629.1| DNA protecting protein DprA [Propionibacterium acnes SK137]
gi|291376560|gb|ADE00415.1| DNA protecting protein DprA [Propionibacterium acnes SK137]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|78484539|ref|YP_390464.1| DNA processing protein DprA, putative [Thiomicrospira crunogena
XCL-2]
gi|78362825|gb|ABB40790.1| DNA protecting protein DprA [Thiomicrospira crunogena XCL-2]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD +YP NR L +I D G +SE P G
Sbjct: 182 VATGLDRVYPAANRELARQIADR-GALVSEYPLG 214
>gi|327334330|gb|EGE76044.1| DNA processing / uptake protein [Propionibacterium acnes HL097PA1]
Length = 377
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|160934426|ref|ZP_02081813.1| hypothetical protein CLOLEP_03299 [Clostridium leptum DSM 753]
gi|156867099|gb|EDO60471.1| hypothetical protein CLOLEP_03299 [Clostridium leptum DSM 753]
Length = 396
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GG D YPP + + I +NGG +SE P
Sbjct: 171 LGGGADVDYPPNFAGMRKRILENGGAVLSEYPP 203
>gi|262281297|ref|ZP_06059078.1| DNA protecting protein DprA [Acinetobacter calcoaceticus RUH2202]
gi|262257123|gb|EEY75860.1| DNA protecting protein DprA [Acinetobacter calcoaceticus RUH2202]
Length = 376
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E+I G I+E G
Sbjct: 182 GLDSTYPAQNKKLAEQILAQNGAIITEFLPG 212
>gi|283458211|ref|YP_003362829.1| putative Rossmann fold nucleotide-binding protein [Rothia
mucilaginosa DY-18]
gi|283134244|dbj|BAI65009.1| predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Rothia mucilaginosa DY-18]
Length = 613
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD LYP +N + L I D G+ +SE+ G
Sbjct: 408 MAGGLDRLYPAQNSDALNMIVDR-GLIMSEVSVG 440
>gi|255326005|ref|ZP_05367093.1| DNA protecting protein DprA [Rothia mucilaginosa ATCC 25296]
gi|255296896|gb|EET76225.1| DNA protecting protein DprA [Rothia mucilaginosa ATCC 25296]
Length = 588
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD LYP +N + L I D G+ +SE+ G
Sbjct: 383 MAGGLDRLYPAQNSDALNMIVDR-GLIMSEVSVG 415
>gi|326387674|ref|ZP_08209280.1| DNA processing protein DprA, putative [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207720|gb|EGD58531.1| DNA processing protein DprA, putative [Novosphingobium
nitrogenifigens DSM 19370]
Length = 383
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YPP++ L E I G+ ++E+P G
Sbjct: 182 IAGGIDVAYPPDHAALQERI-AAEGLLVAEMPPG 214
>gi|313773612|gb|EFS39578.1| DNA protecting protein DprA [Propionibacterium acnes HL074PA1]
Length = 377
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 210
>gi|300741393|ref|ZP_07071414.1| DNA protecting protein DprA [Rothia dentocariosa M567]
gi|300380578|gb|EFJ77140.1| DNA protecting protein DprA [Rothia dentocariosa M567]
Length = 422
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD YP +N +L I + G+ +SE+ G
Sbjct: 218 MAGGLDHFYPVQNSEILHRIVEE-GLILSEVSIG 250
>gi|325124150|gb|ADY83673.1| putative Rossmann-fold nucleotide-binding protein involved in DNA
uptake (smf) [Acinetobacter calcoaceticus PHEA-2]
Length = 377
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDSTYPAQNKKLAEHILAQNGAIITEFLPG 212
>gi|284045125|ref|YP_003395465.1| DNA protecting protein DprA [Conexibacter woesei DSM 14684]
gi|283949346|gb|ADB52090.1| DNA protecting protein DprA [Conexibacter woesei DSM 14684]
Length = 366
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG + YP R L E I G+ +SE+P G
Sbjct: 178 LAGGAERAYPASKRRLHERI-AASGVVVSEMPPG 210
>gi|171743302|ref|ZP_02919109.1| hypothetical protein BIFDEN_02431 [Bifidobacterium dentium ATCC
27678]
gi|306823247|ref|ZP_07456623.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|309801593|ref|ZP_07695714.1| DNA protecting protein DprA [Bifidobacterium dentium JCVIHMP022]
gi|171278916|gb|EDT46577.1| hypothetical protein BIFDEN_02431 [Bifidobacterium dentium ATCC
27678]
gi|304553879|gb|EFM41790.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|308221725|gb|EFO78016.1| DNA protecting protein DprA [Bifidobacterium dentium JCVIHMP022]
Length = 449
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
AGGL+ + P N L E I D G +SE+
Sbjct: 231 AGGLNHIGPKSNARLFERIVDGKGALVSEL 260
>gi|163742204|ref|ZP_02149592.1| DNA processing protein DprA, putative [Phaeobacter gallaeciensis
2.10]
gi|161384534|gb|EDQ08915.1| DNA processing protein DprA, putative [Phaeobacter gallaeciensis
2.10]
Length = 355
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I + G+ ISE P G
Sbjct: 123 MAGGVDVIYPTENTRLAGDIAEQ-GVMISEHPMG 155
>gi|163738379|ref|ZP_02145794.1| DNA processing protein DprA, putative [Phaeobacter gallaeciensis
BS107]
gi|161388300|gb|EDQ12654.1| DNA processing protein DprA, putative [Phaeobacter gallaeciensis
BS107]
Length = 355
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L +I + G+ ISE P G
Sbjct: 123 MAGGVDVIYPTENTRLAGDIAEQ-GVMISEHPMG 155
>gi|94497602|ref|ZP_01304171.1| DNA processing chain A [Sphingomonas sp. SKA58]
gi|94423019|gb|EAT08051.1| DNA processing chain A [Sphingomonas sp. SKA58]
Length = 360
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D ++PPENR+L +E G+ ++E P G
Sbjct: 164 IACGIDVVFPPENRDL-QEALAERGLLVTEHPPG 196
>gi|152965377|ref|YP_001361161.1| DNA protecting protein DprA [Kineococcus radiotolerans SRS30216]
gi|151359894|gb|ABS02897.1| DNA protecting protein DprA [Kineococcus radiotolerans SRS30216]
Length = 395
Score = 36.7 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPP N LL G +SE+P G
Sbjct: 199 LACGVDRSYPPGNAALLAR-LAERGALVSEVPPG 231
>gi|289426516|ref|ZP_06428259.1| DNA protecting protein DprA [Propionibacterium acnes SK187]
gi|289153244|gb|EFD01962.1| DNA protecting protein DprA [Propionibacterium acnes SK187]
Length = 391
Score = 36.7 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 192 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPLG 224
>gi|212639577|ref|YP_002316097.1| putative Rossmann fold nucleotide-binding protein involved in DNA
uptake [Anoxybacillus flavithermus WK1]
gi|212561057|gb|ACJ34112.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Anoxybacillus flavithermus WK1]
Length = 295
Score = 36.7 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGL +YPPEN +L ++ + ISE P
Sbjct: 175 IAGGLYYMYPPENESLFRQLATTQ-LIISEYPP 206
>gi|297571162|ref|YP_003696936.1| DNA protecting protein DprA [Arcanobacterium haemolyticum DSM
20595]
gi|296931509|gb|ADH92317.1| DNA protecting protein DprA [Arcanobacterium haemolyticum DSM
20595]
Length = 384
Score = 36.7 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D YP + +L N G+ +SE P G
Sbjct: 187 AGGVDRPYPLSHADLYTNTVKN-GVVVSESPVG 218
>gi|293611138|ref|ZP_06693436.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826389|gb|EFF84756.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 377
Score = 36.7 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDSTYPAQNKKLAEHILAQNGAIITEFLPG 212
>gi|34335037|gb|AAQ65012.1| unknown [synthetic construct]
gi|301159282|emb|CBW18797.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|323131067|gb|ADX18497.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
Length = 325
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GL+ P +N L +I +NGG +SE P G
Sbjct: 178 LAHGLELAKPKQNAKLARDILENGGAWMSEYPVG 211
>gi|163839842|ref|YP_001624247.1| SMF family protein [Renibacterium salmoninarum ATCC 33209]
gi|162953318|gb|ABY22833.1| SMF family protein [Renibacterium salmoninarum ATCC 33209]
Length = 323
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGGLD YP N LL EI G+ ++E+P G
Sbjct: 126 MAGGLDRFYPAGNELLLREI-SQSGLLLAEVPPG 158
>gi|240170585|ref|ZP_04749244.1| hypothetical protein MkanA1_14825 [Mycobacterium kansasii ATCC
12478]
Length = 388
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + +LL I ++ G+ I+E P G
Sbjct: 183 LAGGIDVPYPAGHSSLLHRIGEH-GLLITEYPPG 215
>gi|296453948|ref|YP_003661091.1| SMF family protein [Bifidobacterium longum subsp. longum JDM301]
gi|296183379|gb|ADH00261.1| SMF family protein [Bifidobacterium longum subsp. longum JDM301]
Length = 566
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 256 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 288
>gi|281355863|ref|ZP_06242357.1| DNA protecting protein DprA [Victivallis vadensis ATCC BAA-548]
gi|281318743|gb|EFB02763.1| DNA protecting protein DprA [Victivallis vadensis ATCC BAA-548]
Length = 380
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GGL ++P EN L I + GG ISE P
Sbjct: 172 LGGGLMRIHPQENVPLARRIVETGGAVISEFPM 204
>gi|84516624|ref|ZP_01003983.1| DNA processing protein DprA, putative [Loktanella vestfoldensis
SKA53]
gi|84509660|gb|EAQ06118.1| DNA processing protein DprA, putative [Loktanella vestfoldensis
SKA53]
Length = 336
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L +I G+ I+E+P G
Sbjct: 141 AGGVDVIYPVENTQLAHDIAKQ-GLRIAEMPMG 172
>gi|239928676|ref|ZP_04685629.1| DNA processing Smf-family protein [Streptomyces ghanaensis ATCC
14672]
gi|291437000|ref|ZP_06576390.1| DNA processing Smf-family protein [Streptomyces ghanaensis ATCC
14672]
gi|291339895|gb|EFE66851.1| DNA processing Smf-family protein [Streptomyces ghanaensis ATCC
14672]
Length = 386
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I + G+ I E+P G
Sbjct: 181 LACGVDRPYPRGHTGLITRIAEQ-GLVIGELPPG 213
>gi|312797603|ref|YP_004030525.1| DNA processing protein [Burkholderia rhizoxinica HKI 454]
gi|312169378|emb|CBW76381.1| DNA processing protein [Burkholderia rhizoxinica HKI 454]
Length = 629
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G D +YP + L EI + GG ++E P G
Sbjct: 274 GADVIYPQRHTGLAAEIVERGGAILTEWPLG 304
>gi|213692568|ref|YP_002323154.1| SMF family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524029|gb|ACJ52776.1| SMF family protein [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 566
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 256 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 288
>gi|320458720|dbj|BAJ69341.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 550
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P NR L E I GG ISE+ G
Sbjct: 240 AGGLNHIGPMRNRTLFERIEAQGGALISELCPG 272
>gi|283455725|ref|YP_003360289.1| Smf protein [Bifidobacterium dentium Bd1]
gi|283102359|gb|ADB09465.1| Smf protein [Bifidobacterium dentium Bd1]
Length = 422
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
AGGL+ + P N L E I D G +SE+
Sbjct: 204 AGGLNHIGPKSNARLFERIVDGKGALVSEL 233
>gi|254415891|ref|ZP_05029648.1| DNA protecting protein DprA, putative [Microcoleus chthonoplastes
PCC 7420]
gi|196177318|gb|EDX72325.1| DNA protecting protein DprA, putative [Microcoleus chthonoplastes
PCC 7420]
Length = 374
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YPP N+ L E I D G+ +SE P G
Sbjct: 180 GIDVIYPPRNKLLYETILDR-GLVLSEYPAG 209
>gi|158337778|ref|YP_001518954.1| DNA protecting protein DprA [Acaryochloris marina MBIC11017]
gi|158308019|gb|ABW29636.1| DNA protecting protein DprA [Acaryochloris marina MBIC11017]
Length = 376
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YPP N+ L ++I + G+ +SE P G
Sbjct: 176 LGTGVDMIYPPRNQGLYQKI-EQQGLLLSEYPSG 208
>gi|268608877|ref|ZP_06142604.1| DNA protecting protein DprA [Ruminococcus flavefaciens FD-1]
Length = 422
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D YP N+ E+I GG+ ISE P G
Sbjct: 171 MGCGVDVDYPKPNQQFREKILQCGGVFISEFPPG 204
>gi|331695085|ref|YP_004331324.1| DNA protecting protein DprA [Pseudonocardia dioxanivorans CB1190]
gi|326949774|gb|AEA23471.1| DNA protecting protein DprA [Pseudonocardia dioxanivorans CB1190]
Length = 292
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +P ++ L + + + GG+ +SE P G
Sbjct: 172 LANGVDLTHPHQHARLHQTLIEQGGLLVSEYPIG 205
>gi|304399255|ref|ZP_07381121.1| DNA protecting protein DprA [Pantoea sp. aB]
gi|304353181|gb|EFM17562.1| DNA protecting protein DprA [Pantoea sp. aB]
Length = 374
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP + +L EI + GG ISE P
Sbjct: 167 LGSGLQNLYPKNHADLAAEIVEQGGAVISEFPL 199
>gi|184200719|ref|YP_001854926.1| putative DNA processing protein [Kocuria rhizophila DC2201]
gi|183580949|dbj|BAG29420.1| putative DNA processing protein [Kocuria rhizophila DC2201]
Length = 442
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP N LLE I G+ +SE+P G
Sbjct: 232 LACGVDRAYPAANAELLERI-RQRGLVLSEVPLG 264
>gi|187250577|ref|YP_001875059.1| DNA protecting protein DprA [Elusimicrobium minutum Pei191]
gi|186970737|gb|ACC97722.1| DNA protecting protein DprA (DNA processing chain A)
[Elusimicrobium minutum Pei191]
Length = 372
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+ YP EN+ L + +NGG ISE+ F
Sbjct: 177 GIGRCYPAENKALANAVLENGGAIISELSF 206
>gi|261380552|ref|ZP_05985125.1| DNA processing protein DprA [Neisseria subflava NJ9703]
gi|284796520|gb|EFC51867.1| DNA processing protein DprA [Neisseria subflava NJ9703]
Length = 396
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AERGLIVSEFPL 208
>gi|225027213|ref|ZP_03716405.1| hypothetical protein EUBHAL_01469 [Eubacterium hallii DSM 3353]
gi|224955442|gb|EEG36651.1| hypothetical protein EUBHAL_01469 [Eubacterium hallii DSM 3353]
Length = 373
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YP EN NL ++++ GG+ +SE G
Sbjct: 171 LGGGIDTIYPVENFNLYQQVYQMGGV-LSEYNMG 203
>gi|295836279|ref|ZP_06823212.1| SMF protein [Streptomyces sp. SPB74]
gi|197697356|gb|EDY44289.1| SMF protein [Streptomyces sp. SPB74]
Length = 395
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPP + LL I + G+ + E+P G
Sbjct: 186 LACGIDRSYPPGHARLLARIAEQ-GLLVGELPPG 218
>gi|146305098|ref|YP_001185563.1| DNA protecting protein DprA [Pseudomonas mendocina ymp]
gi|145573299|gb|ABP82831.1| DNA protecting protein DprA [Pseudomonas mendocina ymp]
Length = 368
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+CLYP ++ L +I + GG +SE+P
Sbjct: 179 LGTGLECLYPARHKRLAAQIIEQGGALVSELPL 211
>gi|229820997|ref|YP_002882523.1| DNA protecting protein DprA [Beutenbergia cavernae DSM 12333]
gi|229566910|gb|ACQ80761.1| DNA protecting protein DprA [Beutenbergia cavernae DSM 12333]
Length = 386
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPP N +LL + G ++E+P G
Sbjct: 186 LAGGLDRFYPPGNSDLLRAV-GRDGALVAELPPG 218
>gi|312792638|ref|YP_004025561.1| DNA protecting protein dpra [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179778|gb|ADQ39948.1| DNA protecting protein DprA [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 365
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I +N G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIEN-GCVVSEFLPG 203
>gi|312126810|ref|YP_003991684.1| DNA protecting protein dpra [Caldicellulosiruptor hydrothermalis
108]
gi|311776829|gb|ADQ06315.1| DNA protecting protein DprA [Caldicellulosiruptor hydrothermalis
108]
Length = 365
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I +N G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIEN-GCVVSEFLPG 203
>gi|312135863|ref|YP_004003201.1| DNA protecting protein dpra [Caldicellulosiruptor owensensis OL]
gi|311775914|gb|ADQ05401.1| DNA protecting protein DprA [Caldicellulosiruptor owensensis OL]
Length = 365
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I +N G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIEN-GCVVSEFLPG 203
>gi|227497528|ref|ZP_03927756.1| DNA protecting protein DprA [Actinomyces urogenitalis DSM 15434]
gi|226833009|gb|EEH65392.1| DNA protecting protein DprA [Actinomyces urogenitalis DSM 15434]
Length = 437
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYP N LL+E+ ++ G ++E+P G
Sbjct: 232 AGGVDRLYPAGNATLLQEVIEH-GALVAEVPPG 263
>gi|254511723|ref|ZP_05123790.1| DNA protecting protein DprA [Rhodobacteraceae bacterium KLH11]
gi|221535434|gb|EEE38422.1| DNA protecting protein DprA [Rhodobacteraceae bacterium KLH11]
Length = 351
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN +L +I G+ +SE P G
Sbjct: 153 MAGGVDVIYPAENTDLARDI-AKSGLRLSEQPMG 185
>gi|126434555|ref|YP_001070246.1| DNA protecting protein DprA [Mycobacterium sp. JLS]
gi|126234355|gb|ABN97755.1| DNA protecting protein DprA [Mycobacterium sp. JLS]
Length = 376
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL I N G+ +SE P G
Sbjct: 181 VAGGIDVPYPAGHSALLARIRAN-GLVLSEYPPG 213
>gi|331698494|ref|YP_004334733.1| DNA protecting protein DprA [Pseudonocardia dioxanivorans CB1190]
gi|326953183|gb|AEA26880.1| DNA protecting protein DprA [Pseudonocardia dioxanivorans CB1190]
Length = 396
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G+D YP + LL I G+ +SE P G
Sbjct: 200 MACGVDRAYPAAHSELLARI-AATGLVVSEYPPG 232
>gi|318075686|ref|ZP_07983018.1| DNA mediated transformation protein [Streptomyces sp. SA3_actF]
Length = 212
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPP + LL I + G+ + E+P G
Sbjct: 4 LACGIDRAYPPGHARLLARIAEQ-GLLLGELPPG 36
>gi|241760431|ref|ZP_04758525.1| DNA protecting protein DprA [Neisseria flavescens SK114]
gi|241319100|gb|EER55593.1| DNA protecting protein DprA [Neisseria flavescens SK114]
Length = 396
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AERGLIVSEFPL 208
>gi|302382941|ref|YP_003818764.1| DNA protecting protein DprA [Brevundimonas subvibrioides ATCC
15264]
gi|302193569|gb|ADL01141.1| DNA protecting protein DprA [Brevundimonas subvibrioides ATCC
15264]
Length = 360
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YPP+N +L ++I G +SE P G
Sbjct: 167 LGGGVDDVYPPDNASLYDQI-AQQGCIVSESPMG 199
>gi|225352788|ref|ZP_03743811.1| hypothetical protein BIFPSEUDO_04420 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156395|gb|EEG69964.1| hypothetical protein BIFPSEUDO_04420 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 456
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ + P N L E I ++ G ISE+ G
Sbjct: 239 AGGLNYIGPKSNERLFETIINHSGALISELCPG 271
>gi|125972980|ref|YP_001036890.1| DNA protecting protein DprA [Clostridium thermocellum ATCC 27405]
gi|256004777|ref|ZP_05429752.1| DNA protecting protein DprA [Clostridium thermocellum DSM 2360]
gi|281417191|ref|ZP_06248211.1| DNA protecting protein DprA [Clostridium thermocellum JW20]
gi|125713205|gb|ABN51697.1| DNA protecting protein DprA [Clostridium thermocellum ATCC 27405]
gi|255991227|gb|EEU01334.1| DNA protecting protein DprA [Clostridium thermocellum DSM 2360]
gi|281408593|gb|EFB38851.1| DNA protecting protein DprA [Clostridium thermocellum JW20]
gi|316940784|gb|ADU74818.1| DNA protecting protein DprA [Clostridium thermocellum DSM 1313]
Length = 370
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP EN+ L+E I ++ G +SE G
Sbjct: 172 LGCGLDIVYPYENKKLMENIIES-GACLSEYLPG 204
>gi|330839578|ref|YP_004414158.1| DNA protecting protein DprA [Selenomonas sputigena ATCC 35185]
gi|329747342|gb|AEC00699.1| DNA protecting protein DprA [Selenomonas sputigena ATCC 35185]
Length = 364
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN LL EI G ISE G
Sbjct: 171 LGCGVDVAYPRENARLLAEI-AEKGAVISEYAPG 203
>gi|108798955|ref|YP_639152.1| DNA processing protein DprA, putative [Mycobacterium sp. MCS]
gi|119868070|ref|YP_938022.1| DNA protecting protein DprA [Mycobacterium sp. KMS]
gi|108769374|gb|ABG08096.1| DNA protecting protein DprA [Mycobacterium sp. MCS]
gi|119694159|gb|ABL91232.1| DNA protecting protein DprA [Mycobacterium sp. KMS]
Length = 376
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL I N G+ +SE P G
Sbjct: 181 VAGGIDVPYPAGHSALLARIRAN-GLVLSEYPPG 213
>gi|260554283|ref|ZP_05826533.1| DNA protecting protein DprA [Acinetobacter sp. RUH2624]
gi|260404592|gb|EEW98112.1| DNA protecting protein DprA [Acinetobacter sp. RUH2624]
Length = 376
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDTTYPAQNKKLAEHILAQNGAIITEFLPG 212
>gi|183981827|ref|YP_001850118.1| hypothetical protein MMAR_1814 [Mycobacterium marinum M]
gi|183175153|gb|ACC40263.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
Length = 391
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL I G+ ++E P G
Sbjct: 183 LAGGIDIPYPTGHSALLHRI-GQHGLLVTEYPPG 215
>gi|330500989|ref|YP_004377858.1| DNA protecting protein DprA [Pseudomonas mendocina NK-01]
gi|328915275|gb|AEB56106.1| DNA protecting protein DprA [Pseudomonas mendocina NK-01]
Length = 372
Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL CLYP + L I + GG +SE+P
Sbjct: 183 LGTGLQCLYPRRHVGLAARIIEQGGALVSELPL 215
>gi|312621559|ref|YP_004023172.1| DNA protecting protein dpra [Caldicellulosiruptor kronotskyensis
2002]
gi|312202026|gb|ADQ45353.1| DNA protecting protein DprA [Caldicellulosiruptor kronotskyensis
2002]
Length = 365
Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I +N G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIEN-GCVVSEFLPG 203
>gi|330466300|ref|YP_004404043.1| DNA protecting protein DprA [Verrucosispora maris AB-18-032]
gi|328809271|gb|AEB43443.1| DNA protecting protein DprA [Verrucosispora maris AB-18-032]
Length = 391
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+A G+D YP N L + I D+ G+ +SE P
Sbjct: 192 LACGVDRPYPVGNTALFDRIADS-GLLVSEWPP 223
>gi|312876485|ref|ZP_07736468.1| DNA protecting protein DprA [Caldicellulosiruptor lactoaceticus 6A]
gi|311796696|gb|EFR13042.1| DNA protecting protein DprA [Caldicellulosiruptor lactoaceticus 6A]
Length = 365
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I +N G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIEN-GCVVSEFLPG 203
>gi|300933910|ref|ZP_07149166.1| putative DNA processing protein [Corynebacterium resistens DSM
45100]
Length = 400
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP +N L ++I + G+ +SE G
Sbjct: 200 LACGLDVNYPIKNAQLFQQI-THNGVLVSEYAPG 232
>gi|260886588|ref|ZP_05897851.1| DNA processing protein DprA [Selenomonas sputigena ATCC 35185]
gi|260863731|gb|EEX78231.1| DNA processing protein DprA [Selenomonas sputigena ATCC 35185]
Length = 370
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN LL EI G ISE G
Sbjct: 177 LGCGVDVAYPRENARLLAEI-AEKGAVISEYAPG 209
>gi|332139432|ref|YP_004425170.1| DNA protecting protein DprA [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549454|gb|AEA96172.1| DNA protecting protein DprA [Alteromonas macleodii str. 'Deep
ecotype']
Length = 369
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G D +YP +N L EI D+GG++++E G
Sbjct: 174 MGTGPDKIYPAKNSKLYNEIHDSGGVSVTEFFPG 207
>gi|147669298|ref|YP_001214116.1| DNA protecting protein DprA [Dehalococcoides sp. BAV1]
gi|146270246|gb|ABQ17238.1| DNA protecting protein DprA [Dehalococcoides sp. BAV1]
Length = 373
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN +L +I G ISE P G
Sbjct: 175 CGLDIIYPSENHSLARQI-AEDGALISEHPPG 205
>gi|225075474|ref|ZP_03718673.1| hypothetical protein NEIFLAOT_00479 [Neisseria flavescens
NRL30031/H210]
gi|224953193|gb|EEG34402.1| hypothetical protein NEIFLAOT_00479 [Neisseria flavescens
NRL30031/H210]
Length = 396
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AERGLIVSEFPL 208
>gi|154504527|ref|ZP_02041265.1| hypothetical protein RUMGNA_02031 [Ruminococcus gnavus ATCC 29149]
gi|153795009|gb|EDN77429.1| hypothetical protein RUMGNA_02031 [Ruminococcus gnavus ATCC 29149]
Length = 360
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP + L +I + G +SE+P G
Sbjct: 169 LGSGVDVCYPKNHMGLYLDILEQEGGILSELPPG 202
>gi|119475270|ref|ZP_01615623.1| SMF protein [marine gamma proteobacterium HTCC2143]
gi|119451473|gb|EAW32706.1| SMF protein [marine gamma proteobacterium HTCC2143]
Length = 368
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N+ L E I G ISE P G
Sbjct: 173 LGTGIDIVYPRRNKELFESIVCQ-GAVISEFPMG 205
>gi|119387028|ref|YP_918083.1| DNA protecting protein DprA [Paracoccus denitrificans PD1222]
gi|119377623|gb|ABL72387.1| DNA protecting protein DprA [Paracoccus denitrificans PD1222]
Length = 418
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN L EEI + G+ ++E P G
Sbjct: 182 MAGGIDKIYPGENAALAEEICET-GLLVTEQPPG 214
>gi|222530148|ref|YP_002574030.1| DNA protecting protein DprA [Caldicellulosiruptor bescii DSM 6725]
gi|222456995|gb|ACM61257.1| DNA protecting protein DprA [Caldicellulosiruptor bescii DSM 6725]
Length = 365
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I +N G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIEN-GCVVSEFLPG 203
>gi|312882740|ref|ZP_07742475.1| nucleotide-binding protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369598|gb|EFP97115.1| nucleotide-binding protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 372
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP ++R L + I G ++E P
Sbjct: 172 LGCGLGNVYPAQHRGLAQRILAEKGALVAEFPP 204
>gi|299144231|ref|ZP_07037311.1| DNA processing protein DprA [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518716|gb|EFI42455.1| DNA processing protein DprA [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 362
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D +YP +N+ L +I +N G +SE P
Sbjct: 173 LGSGVDVIYPIKNKKLYYDIVEN-GAVVSEYPP 204
>gi|260431072|ref|ZP_05785043.1| DNA protecting protein DprA [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414900|gb|EEX08159.1| DNA protecting protein DprA [Silicibacter lacuscaerulensis
ITI-1157]
Length = 378
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D +YP EN +L +I G+ +SE P G
Sbjct: 180 MAGGVDIIYPAENADLARDI-SKRGLRLSEQPMG 212
>gi|83589873|ref|YP_429882.1| DNA processing protein DprA, putative [Moorella thermoacetica ATCC
39073]
gi|83572787|gb|ABC19339.1| DNA protecting protein DprA [Moorella thermoacetica ATCC 39073]
Length = 361
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP E+R L ++ ++ G ISE P G
Sbjct: 171 LGCGVDIVYPREHRELYRQVMEH-GAIISEFPPG 203
>gi|269955977|ref|YP_003325766.1| DNA protecting protein DprA [Xylanimonas cellulosilytica DSM 15894]
gi|269304658|gb|ACZ30208.1| DNA protecting protein DprA [Xylanimonas cellulosilytica DSM 15894]
Length = 402
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP N LL + G ++E+P G
Sbjct: 195 MAGGVDRFYPQGNHELLRRV-AETGTVVAEVPPG 227
>gi|257465867|ref|ZP_05630178.1| Smf protein [Fusobacterium gonidiaformans ATCC 25563]
gi|315917024|ref|ZP_07913264.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313690899|gb|EFS27734.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 283
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +N NL I G+ +SE P G
Sbjct: 100 GLDEIYPKQNTNLWNRI-AKEGLLVSEYPLG 129
>gi|257452341|ref|ZP_05617640.1| Smf protein [Fusobacterium sp. 3_1_5R]
gi|317058884|ref|ZP_07923369.1| SMF family protein [Fusobacterium sp. 3_1_5R]
gi|313684560|gb|EFS21395.1| SMF family protein [Fusobacterium sp. 3_1_5R]
Length = 283
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +N NL I G+ +SE P G
Sbjct: 100 GLDEIYPKQNTNLWNRI-AKEGLLVSEYPLG 129
>gi|220917985|ref|YP_002493289.1| DNA protecting protein DprA [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955839|gb|ACL66223.1| DNA protecting protein DprA [Anaeromyxobacter dehalogenans 2CP-1]
Length = 320
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP ++R L E I + GG +SE+P G
Sbjct: 128 LGTGVDVVYPRQHRALFEGILETGGALVSELPDG 161
>gi|327399011|ref|YP_004339880.1| DNA protecting protein DprA [Hippea maritima DSM 10411]
gi|327181640|gb|AEA33821.1| DNA protecting protein DprA [Hippea maritima DSM 10411]
Length = 333
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L +++ G I+E P G
Sbjct: 146 LGCGIDIIYPKENKPLFDKM-SQEGCIITEFPLG 178
>gi|306821569|ref|ZP_07455167.1| DNA protecting protein DprA [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550314|gb|EFM38307.1| DNA protecting protein DprA [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 237
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A +D +YP ENR L EE+ +G + ISE
Sbjct: 44 ATSVDKIYPAENRYLYEEVLADGNLIISE 72
>gi|307292856|ref|ZP_07572702.1| DNA protecting protein DprA [Sphingobium chlorophenolicum L-1]
gi|306880922|gb|EFN12138.1| DNA protecting protein DprA [Sphingobium chlorophenolicum L-1]
Length = 360
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +PPEN +L +E N G+ ++E P G
Sbjct: 164 IACGIDIAFPPENADL-QEQVANEGLLVTEHPPG 196
>gi|260557578|ref|ZP_05829792.1| rossmann fold nucleotide-binding protein [Acinetobacter baumannii
ATCC 19606]
gi|260408751|gb|EEX02055.1| rossmann fold nucleotide-binding protein [Acinetobacter baumannii
ATCC 19606]
Length = 376
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDTTYPAQNKKLAEHILAQNGAIITEFLPG 212
>gi|182416693|ref|ZP_02948094.1| DNA uptake protein [Clostridium butyricum 5521]
gi|237667207|ref|ZP_04527191.1| DNA protecting protein DprA [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379455|gb|EDT76948.1| DNA uptake protein [Clostridium butyricum 5521]
gi|237655555|gb|EEP53111.1| DNA protecting protein DprA [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 353
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G+D +YP EN+ L +I + G+ ISE
Sbjct: 167 LGCGIDRVYPAENKKLFSQI-EEKGVVISE 195
>gi|319950989|ref|ZP_08024859.1| DNA protecting protein DprA [Dietzia cinnamea P4]
gi|319435332|gb|EFV90582.1| DNA protecting protein DprA [Dietzia cinnamea P4]
Length = 401
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP N LL E+ G IS P G
Sbjct: 197 LAGGVDRLYPRGNDGLLREV-AETGAVISAQPPG 229
>gi|313836671|gb|EFS74385.1| DNA protecting protein DprA [Propionibacterium acnes HL037PA2]
gi|314928178|gb|EFS92009.1| DNA protecting protein DprA [Propionibacterium acnes HL044PA1]
gi|314972177|gb|EFT16274.1| DNA protecting protein DprA [Propionibacterium acnes HL037PA3]
Length = 377
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP N +LE+I G ISE+P G
Sbjct: 178 LACGLDTFYPRGNTAVLEKI-AETGALISELPPG 210
>gi|300813844|ref|ZP_07094149.1| DNA protecting protein DprA [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512031|gb|EFK39226.1| DNA protecting protein DprA [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 360
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N NL + D +SE PFG
Sbjct: 173 LGNGIDIIYPKANTNLYMNLLDKA-TIVSEYPFG 205
>gi|282883340|ref|ZP_06291934.1| DNA protecting protein DprA [Peptoniphilus lacrimalis 315-B]
gi|281296844|gb|EFA89346.1| DNA protecting protein DprA [Peptoniphilus lacrimalis 315-B]
Length = 360
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N NL + D +SE PFG
Sbjct: 173 LGNGIDIIYPKANTNLYMNLLDKA-TIVSEYPFG 205
>gi|255319593|ref|ZP_05360805.1| DNA protecting protein DprA [Acinetobacter radioresistens SK82]
gi|262380779|ref|ZP_06073932.1| DNA protecting protein DprA [Acinetobacter radioresistens SH164]
gi|255303348|gb|EET82553.1| DNA protecting protein DprA [Acinetobacter radioresistens SK82]
gi|262297727|gb|EEY85643.1| DNA protecting protein DprA [Acinetobacter radioresistens SH164]
Length = 376
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP NR L E+I GG +SE G
Sbjct: 182 GLDLVYPAHNRKLQEQILQYGGTIVSEFLPG 212
>gi|298370610|ref|ZP_06981925.1| smf protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281220|gb|EFI22710.1| smf protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 393
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N++L EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKSLAYEI-AEKGLIVSEFPL 208
>gi|169797635|ref|YP_001715428.1| putative Rossmann-fold nucleotide-binding protein involved in DNA
uptake (Smf) [Acinetobacter baumannii AYE]
gi|213155571|ref|YP_002317616.1| DNA protecting protein DprA [Acinetobacter baumannii AB0057]
gi|215484989|ref|YP_002327230.1| DNA protecting protein DprA [Acinetobacter baumannii AB307-0294]
gi|301346866|ref|ZP_07227607.1| DNA protecting protein DprA [Acinetobacter baumannii AB056]
gi|301512294|ref|ZP_07237531.1| DNA protecting protein DprA [Acinetobacter baumannii AB058]
gi|301594508|ref|ZP_07239516.1| DNA protecting protein DprA [Acinetobacter baumannii AB059]
gi|169150562|emb|CAM88471.1| putative Rossmann-fold nucleotide-binding protein involved in DNA
uptake (Smf) [Acinetobacter baumannii AYE]
gi|213054731|gb|ACJ39633.1| DNA protecting protein DprA [Acinetobacter baumannii AB0057]
gi|213988661|gb|ACJ58960.1| DNA protecting protein DprA [Acinetobacter baumannii AB307-0294]
Length = 376
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDTTYPAQNKKLAEHILAQNGAIITEFLPG 212
>gi|56459131|ref|YP_154412.1| DNA uptake Rossmann fold nucleotide-binding protein [Idiomarina
loihiensis L2TR]
gi|56178141|gb|AAV80863.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Idiomarina loihiensis L2TR]
Length = 336
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP N+ L ++ + G+ ISE P G
Sbjct: 145 LGTGIDQYYPRRNKAL-QDFIAHQGLLISEFPPG 177
>gi|253573510|ref|ZP_04850853.1| DNA protecting protein DprA [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251847038|gb|EES75043.1| DNA protecting protein DprA [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 373
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ +D YPPE+ ++ I + G+ ISE P G
Sbjct: 182 LGTAIDVAYPPEHVSMYRRIAEQ-GLVISEYPIG 214
>gi|333024159|ref|ZP_08452223.1| putative DNA processing Smf-family protein [Streptomyces sp.
Tu6071]
gi|332744011|gb|EGJ74452.1| putative DNA processing Smf-family protein [Streptomyces sp.
Tu6071]
Length = 371
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPP + LL I + G+ + E+P G
Sbjct: 163 LACGIDRAYPPGHARLLARIAEQ-GLLLGELPPG 195
>gi|193076054|gb|ABO10649.2| putative Rossmann-fold nucleotide-binding DNA uptake protein (Smf)
[Acinetobacter baumannii ATCC 17978]
Length = 383
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 189 GLDTTYPAQNKKLAEHILAQNGAIITEFLPG 219
>gi|153873640|ref|ZP_02002157.1| SMF protein [Beggiatoa sp. PS]
gi|152069893|gb|EDN67842.1| SMF protein [Beggiatoa sp. PS]
Length = 295
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YPP +R L ++I G +SE P G
Sbjct: 174 LGWGLDQIYPPAHRELGDKI-AETGALVSEFPPG 206
>gi|318056577|ref|ZP_07975300.1| DNA processing Smf-family protein [Streptomyces sp. SA3_actG]
Length = 395
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPP + LL I + G+ + E+P G
Sbjct: 187 LACGIDRAYPPGHARLLARIAEQ-GLLLGELPPG 219
>gi|332852663|ref|ZP_08434317.1| DNA protecting protein DprA [Acinetobacter baumannii 6013150]
gi|332869379|ref|ZP_08438757.1| DNA protecting protein DprA [Acinetobacter baumannii 6013113]
gi|332729131|gb|EGJ60478.1| DNA protecting protein DprA [Acinetobacter baumannii 6013150]
gi|332732797|gb|EGJ64013.1| DNA protecting protein DprA [Acinetobacter baumannii 6013113]
Length = 383
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 189 GLDTTYPAQNKKLAEHILAQNGAIITEFLPG 219
>gi|170783520|ref|YP_001742013.1| putative smf family protein [Arthrobacter sp. AK-1]
gi|150035007|gb|ABR67018.1| putative smf family protein [Arthrobacter sp. AK-1]
Length = 399
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP N +L I N G+ +SE+P G
Sbjct: 281 LAGGLDRDYPSGNADLAAAIRAN-GLTLSELPPG 313
>gi|302522170|ref|ZP_07274512.1| DNA processing Smf-family protein [Streptomyces sp. SPB78]
gi|302431065|gb|EFL02881.1| DNA processing Smf-family protein [Streptomyces sp. SPB78]
Length = 395
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YPP + LL I + G+ + E+P G
Sbjct: 187 LACGIDRAYPPGHARLLARIAEQ-GLLLGELPPG 219
>gi|257064734|ref|YP_003144406.1| predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Slackia heliotrinireducens DSM 20476]
gi|256792387|gb|ACV23057.1| predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Slackia heliotrinireducens DSM 20476]
Length = 231
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLD YP +N +L + I GG ++E
Sbjct: 102 LGSGLDNPYPSDNIDLFQAIVGGGGCVVTEY 132
>gi|85711004|ref|ZP_01042065.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Idiomarina baltica OS145]
gi|85695408|gb|EAQ33345.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Idiomarina baltica OS145]
Length = 347
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP NR L E+ + G+ ISE G
Sbjct: 157 LGTGIDQIYPRRNRELY-ELISHQGLIISEFSPG 189
>gi|331091326|ref|ZP_08340166.1| hypothetical protein HMPREF9477_00809 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404487|gb|EGG84031.1| hypothetical protein HMPREF9477_00809 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 361
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN L E++ + GG +SE P G
Sbjct: 171 LGSGVDVCYPRENIGLYEDLQEKGG-ILSEQPLG 203
>gi|328907959|gb|EGG27719.1| DNA protecting protein DprA [Propionibacterium sp. P08]
Length = 391
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP N +LE+I G ISE+P G
Sbjct: 192 LACGLDTFYPRGNTAVLEKI-AETGALISELPPG 224
>gi|315104185|gb|EFT76161.1| DNA protecting protein DprA [Propionibacterium acnes HL050PA2]
Length = 377
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPTG 210
>gi|302554439|ref|ZP_07306781.1| DNA processing Smf-family protein [Streptomyces viridochromogenes
DSM 40736]
gi|302472057|gb|EFL35150.1| DNA processing Smf-family protein [Streptomyces viridochromogenes
DSM 40736]
Length = 386
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I D G+ + E+P G
Sbjct: 181 LACGVDRPYPRGHAQLITRIADQ-GLVVGELPPG 213
>gi|154250247|ref|YP_001411072.1| DNA protecting protein DprA [Fervidobacterium nodosum Rt17-B1]
gi|154154183|gb|ABS61415.1| DNA protecting protein DprA [Fervidobacterium nodosum Rt17-B1]
Length = 333
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ G+D +YP N L +EI N G ISE
Sbjct: 151 LGCGVDYIYPKSNERLYQEIIKN-GCVISEY 180
>gi|149197252|ref|ZP_01874304.1| SMF family protein involved in DNA uptake [Lentisphaera araneosa
HTCC2155]
gi|149139798|gb|EDM28199.1| SMF family protein involved in DNA uptake [Lentisphaera araneosa
HTCC2155]
Length = 380
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GG+ +YP +N L +I D+ G +SE P
Sbjct: 175 LGGGIGKIYPKDNLKLARDICDH-GALVSEYPI 206
>gi|117621477|ref|YP_854788.1| DNA protecting protein DprA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562884|gb|ABK39832.1| DNA protecting protein DprA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 371
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLDCLYP ++ L EI GG+ ISE+
Sbjct: 174 LGSGLDCLYPKRHQGLAMEILVRGGLLISEL 204
>gi|83945523|ref|ZP_00957870.1| dprA protein [Oceanicaulis alexandrii HTCC2633]
gi|83851099|gb|EAP88957.1| dprA protein [Oceanicaulis alexandrii HTCC2633]
Length = 372
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGL +YPPE+ L I G+ +SE P
Sbjct: 171 LAGGLTSIYPPEHEALYHAI-SEQGLLVSESPP 202
>gi|314923937|gb|EFS87768.1| DNA protecting protein DprA [Propionibacterium acnes HL001PA1]
gi|314966118|gb|EFT10217.1| DNA protecting protein DprA [Propionibacterium acnes HL082PA2]
gi|315094913|gb|EFT66889.1| DNA protecting protein DprA [Propionibacterium acnes HL060PA1]
gi|327328005|gb|EGE69774.1| DNA processing / uptake protein [Propionibacterium acnes HL103PA1]
Length = 377
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD LYP N +LE+I G +SE+P G
Sbjct: 178 LACGLDTLYPRGNSAVLEQI-AGTGALVSELPTG 210
>gi|170079101|ref|YP_001735739.1| DNA protecting protein [Synechococcus sp. PCC 7002]
gi|169886770|gb|ACB00484.1| DNA protecting protein [Synechococcus sp. PCC 7002]
Length = 381
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP +RNL EI G+ +SE P G
Sbjct: 175 LGTGIDQIYPASHRNLYNEILAQ-GLILSEYPAG 207
>gi|319945033|ref|ZP_08019295.1| DNA processing SMF protein [Lautropia mirabilis ATCC 51599]
gi|319741603|gb|EFV94028.1| DNA processing SMF protein [Lautropia mirabilis ATCC 51599]
Length = 424
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP + L + + GG+ +SE P G
Sbjct: 195 GIDRIYPAHHLPLARRVLEQGGLVLSEQPLG 225
>gi|297183540|gb|ADI19669.1| predicted rossmann fold nucleotide-binding protein involved in DNA
uptake [uncultured Alteromonadales bacterium
HF4000_16C08]
Length = 373
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G D +YP +N L ++I G I+E G
Sbjct: 178 MGTGPDKVYPRKNSALHQDIISANGACITEFFPG 211
>gi|259909965|ref|YP_002650321.1| DNA protecting protein [Erwinia pyrifoliae Ep1/96]
gi|224965587|emb|CAX57119.1| DNA protecting protein [Erwinia pyrifoliae Ep1/96]
gi|283480065|emb|CAY75981.1| Protein smf [Erwinia pyrifoliae DSM 12163]
Length = 374
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP +++ L ++I D+GG +SE P
Sbjct: 167 LGSGLQAVYPRQHQALAQQIIDSGGALVSEFPL 199
>gi|86159122|ref|YP_465907.1| DNA processing protein DprA [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775633|gb|ABC82470.1| DNA protecting protein DprA [Anaeromyxobacter dehalogenans 2CP-C]
Length = 291
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP ++R L I GG +SE+P G
Sbjct: 99 LGTGVDVAYPAQHRALFARILGAGGALVSELPDG 132
>gi|119716495|ref|YP_923460.1| DNA protecting protein DprA [Nocardioides sp. JS614]
gi|119537156|gb|ABL81773.1| DNA protecting protein DprA [Nocardioides sp. JS614]
Length = 349
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D YP + LLE I G+ +SE P G
Sbjct: 187 LPGGVDRPYPAAHAQLLEAI-AERGLVVSEAPPG 219
>gi|317494306|ref|ZP_07952720.1| DNA protecting protein DprA [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917556|gb|EFV38901.1| DNA protecting protein DprA [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 377
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+ LYP + +L I +N G ISE P
Sbjct: 172 LGCGIAQLYPTCHEHLAARIVENNGAIISEFPP 204
>gi|172040495|ref|YP_001800209.1| putative DNA processing protein [Corynebacterium urealyticum DSM
7109]
gi|171851799|emb|CAQ04775.1| putative DNA processing protein [Corynebacterium urealyticum DSM
7109]
Length = 416
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP ++ L ++I G+ +SE G
Sbjct: 213 LACGLDVDYPRQHVGLFKQI-AESGVVVSEYALG 245
>gi|89092293|ref|ZP_01165247.1| SMF protein [Oceanospirillum sp. MED92]
gi|89083381|gb|EAR62599.1| SMF protein [Oceanospirillum sp. MED92]
Length = 373
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N++L E I N G +SE G
Sbjct: 179 LGTGVDRIYPSRNQSLAESILSNKGAWVSEFFPG 212
>gi|218283549|ref|ZP_03489539.1| hypothetical protein EUBIFOR_02129 [Eubacterium biforme DSM 3989]
gi|218215817|gb|EEC89355.1| hypothetical protein EUBIFOR_02129 [Eubacterium biforme DSM 3989]
Length = 243
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN L E + N G+ ISE P
Sbjct: 129 LGCGINVIYPKENTYLFERM-KNNGLIISEYPM 160
>gi|251793282|ref|YP_003008010.1| DNA-processing chain A [Aggregatibacter aphrophilus NJ8700]
gi|247534677|gb|ACS97923.1| protein smf (DNA-processing chain A) [Aggregatibacter aphrophilus
NJ8700]
Length = 371
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP ++R L +EI N G +SE
Sbjct: 170 LGSGLEEIYPTKHRKLAQEIIANNGALVSE 199
>gi|217967909|ref|YP_002353415.1| DNA protecting protein DprA [Dictyoglomus turgidum DSM 6724]
gi|217337008|gb|ACK42801.1| DNA protecting protein DprA [Dictyoglomus turgidum DSM 6724]
Length = 364
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ LD +YP N L E+I ++ G ISE P G
Sbjct: 172 LGSSLDHIYPSGNLKLAEKIMES-GAIISEYPLG 204
>gi|152972194|ref|YP_001337340.1| DNA protecting protein DprA [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|330002242|ref|ZP_08304253.1| DNA protecting protein DprA [Klebsiella sp. MS 92-3]
gi|150957043|gb|ABR79073.1| putative competence protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|328537381|gb|EGF63630.1| DNA protecting protein DprA [Klebsiella sp. MS 92-3]
Length = 374
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP + L +I DNGG +SE P
Sbjct: 167 LGNGLSQVYPRRHATLARQIIDNGGTLVSEFPL 199
>gi|53803082|ref|YP_115235.1| DNA processing protein DprA [Methylococcus capsulatus str. Bath]
gi|53756843|gb|AAU91134.1| putative DNA processing protein DprA [Methylococcus capsulatus str.
Bath]
Length = 364
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G D +YP ++ L + I +GG+ +SE P G
Sbjct: 174 CGPDRVYPSRHQRLADAIVGSGGVLVSEAPPG 205
>gi|158313010|ref|YP_001505518.1| DNA protecting protein DprA [Frankia sp. EAN1pec]
gi|158108415|gb|ABW10612.1| DNA protecting protein DprA [Frankia sp. EAN1pec]
Length = 408
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + +LL+EI G+ +SE P G
Sbjct: 184 LAGGVDVPYPAAHADLLDEI-AASGLVLSETPPG 216
>gi|295111023|emb|CBL27773.1| DNA protecting protein DprA [Synergistetes bacterium SGP1]
Length = 363
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP E+R L +I G +SE P G
Sbjct: 168 LGTGIDRVYPMEHRELFAQI-AETGALVSEYPMG 200
>gi|91226256|ref|ZP_01261096.1| hypothetical protein V12G01_10321 [Vibrio alginolyticus 12G01]
gi|91189267|gb|EAS75546.1| hypothetical protein V12G01_10321 [Vibrio alginolyticus 12G01]
Length = 329
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+A GL+ +YP +N+ L EI + G+ I+E
Sbjct: 169 LAHGLEKVYPAQNKELASEIVKSNGLLITEY 199
>gi|331269644|ref|YP_004396136.1| DNA uptake protein [Clostridium botulinum BKT015925]
gi|329126194|gb|AEB76139.1| DNA uptake protein [Clostridium botulinum BKT015925]
Length = 359
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L +I N G IS+ G
Sbjct: 169 LGSGIDVIYPKENKYLYNDIIKN-GCVISQFLPG 201
>gi|126640267|ref|YP_001083251.1| putative Rossmann-fold nucleotide-binding DNA uptake protein (Smf)
[Acinetobacter baumannii ATCC 17978]
Length = 362
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 168 GLDTTYPAQNKKLAEHILAQNGAIITEFLPG 198
>gi|295093364|emb|CBK82455.1| DNA protecting protein DprA [Coprococcus sp. ART55/1]
Length = 359
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G++ YP EN ++ +I + GG+ +SE
Sbjct: 172 LGSGINVPYPRENYDIYHDIRNGGGVVLSE 201
>gi|15603464|ref|NP_246538.1| hypothetical protein PM1599 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721995|gb|AAK03683.1| DprA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 373
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE-IPF 33
+ GL+ +YP ++R L E+I ++ G +SE +PF
Sbjct: 169 LGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPF 202
>gi|238896782|ref|YP_002921527.1| DNA protecting protein DprA [Klebsiella pneumoniae NTUH-K2044]
gi|238549109|dbj|BAH65460.1| putative competence protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 374
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP + L +I DNGG +SE P
Sbjct: 167 LGNGLSQVYPRRHATLARQIIDNGGTLVSEFPL 199
>gi|284992379|ref|YP_003410933.1| DNA protecting protein DprA [Geodermatophilus obscurus DSM 43160]
gi|284065624|gb|ADB76562.1| DNA protecting protein DprA [Geodermatophilus obscurus DSM 43160]
Length = 422
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP + L I G+ +SE P G
Sbjct: 215 LACGVDRVYPSAHGALFHRI-AESGLLVSEWPPG 247
>gi|262040755|ref|ZP_06013986.1| DNA protecting protein DprA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041899|gb|EEW42939.1| DNA protecting protein DprA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 379
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP + L +I DNGG +SE P
Sbjct: 172 LGNGLSQVYPRRHATLARQIIDNGGTLVSEFPL 204
>gi|256545486|ref|ZP_05472848.1| DNA processing protein DprA [Anaerococcus vaginalis ATCC 51170]
gi|256398882|gb|EEU12497.1| DNA processing protein DprA [Anaerococcus vaginalis ATCC 51170]
Length = 359
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GLD +YP N+ L E+I + G ISE P
Sbjct: 167 IGSGLDIIYPKANKYLYEKI-EEKGAIISEFPL 198
>gi|148654174|ref|YP_001281267.1| DNA protecting protein DprA [Psychrobacter sp. PRwf-1]
gi|148573258|gb|ABQ95317.1| DNA protecting protein DprA [Psychrobacter sp. PRwf-1]
Length = 421
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D YP +++ L + + GG +SE+ G
Sbjct: 186 MGTGIDVCYPKQHQALFDRMIAEGGCIVSELFPG 219
>gi|325129152|gb|EGC52000.1| putative DNA processing protein DprA [Neisseria meningitidis N1568]
Length = 397
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AERGLIVSEFPL 208
>gi|145300984|ref|YP_001143825.1| DNA processing chain A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853756|gb|ABO92077.1| DNA processing chain A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 371
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLDCLYP ++ L +I ++GG+ ISE+
Sbjct: 174 LGSGLDCLYPKRHQGLAGQILESGGLLISEL 204
>gi|113460558|ref|YP_718622.1| DNA processing chain A [Haemophilus somnus 129PT]
gi|112822601|gb|ABI24690.1| DNA processing chain A [Haemophilus somnus 129PT]
Length = 368
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GGL+ LYP +++ L +++ D GG +SE
Sbjct: 170 LGGGLEELYPKQHKKLAQQMLDYGGALVSE 199
>gi|258514507|ref|YP_003190729.1| DNA protecting protein DprA [Desulfotomaculum acetoxidans DSM 771]
gi|257778212|gb|ACV62106.1| DNA protecting protein DprA [Desulfotomaculum acetoxidans DSM 771]
Length = 366
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP ENR L+E I G ISE P
Sbjct: 172 LGSGLNVIYPRENRKLMERI-AASGAVISEFPL 203
>gi|170783575|ref|YP_001740092.1| putative smf family protein [Arthrobacter sp. Chr15]
gi|150035083|gb|ABR67079.1| putative smf family protein [Arthrobacter sp. Chr15]
Length = 302
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP N +L I G+ +SE+P G
Sbjct: 184 LAGGLDRDYPSGNADLAAAI-RGNGLTLSELPPG 216
>gi|330831508|ref|YP_004394460.1| DNA processing chain A [Aeromonas veronii B565]
gi|328806644|gb|AEB51843.1| DNA processing chain A [Aeromonas veronii B565]
Length = 371
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GLDCLYP ++ L +I + GG+ ISE+
Sbjct: 174 LGSGLDCLYPKRHQGLAGQILEKGGLLISEL 204
>gi|320103360|ref|YP_004178951.1| DNA protecting protein DprA [Isosphaera pallida ATCC 43644]
gi|319750642|gb|ADV62402.1| DNA protecting protein DprA [Isosphaera pallida ATCC 43644]
Length = 453
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MA GL+ +YPPE+ L + I G +SE P
Sbjct: 185 MANGLNSIYPPEHDRLADRIVQQ-GALLSESPM 216
>gi|184156508|ref|YP_001844847.1| Rossmann fold nucleotide-binding protein [Acinetobacter baumannii
ACICU]
gi|183208102|gb|ACC55500.1| predicted Rossmann fold nucleotide-binding protein [Acinetobacter
baumannii ACICU]
Length = 376
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDTTYPAQNKKLAEHILAKNGAIITEFLPG 212
>gi|212695500|ref|ZP_03303628.1| hypothetical protein ANHYDRO_00016 [Anaerococcus hydrogenalis DSM
7454]
gi|212677500|gb|EEB37107.1| hypothetical protein ANHYDRO_00016 [Anaerococcus hydrogenalis DSM
7454]
Length = 359
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GLD +YP N+ L E+I + G+ ISE P
Sbjct: 167 IGSGLDIIYPKANKYLYEKI-EEKGLIISEFPL 198
>gi|300871631|ref|YP_003786504.1| DNA protecting protein DprA [Brachyspira pilosicoli 95/1000]
gi|300689332|gb|ADK32003.1| DNA protecting protein, DprA [Brachyspira pilosicoli 95/1000]
Length = 401
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN + ++ + G+ ISE G
Sbjct: 164 LGCGIDNVYPSENLKVYNKLIE-KGLIISEFEVG 196
>gi|219871700|ref|YP_002476075.1| Smf protein, Rossmann fold nucleotide-binding protein involved in
DNA uptake [Haemophilus parasuis SH0165]
gi|219691904|gb|ACL33127.1| Smf protein, Rossmann fold nucleotide-binding protein involved in
DNA uptake [Haemophilus parasuis SH0165]
Length = 375
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GLD +YP ++ L E+I G +SE
Sbjct: 169 LGSGLDQVYPARHKKLAEQIVATSGALVSE 198
>gi|121633994|ref|YP_974239.1| SMF-family protein [Neisseria meningitidis FAM18]
gi|120865700|emb|CAM09427.1| SMF-family protein [Neisseria meningitidis FAM18]
Length = 397
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G+D +YPP N+NL EI G+ +SE P
Sbjct: 180 GIDRIYPPSNKNLAYEI-AERGLIVSEFPL 208
>gi|170718904|ref|YP_001784075.1| DNA protecting protein DprA [Haemophilus somnus 2336]
gi|168827033|gb|ACA32404.1| DNA protecting protein DprA [Haemophilus somnus 2336]
Length = 368
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GGL+ LYP +++ L +++ D GG +SE
Sbjct: 170 LGGGLEELYPKQHKKLAQQMLDYGGALVSE 199
>gi|323516244|gb|ADX90625.1| Rossmann fold nucleotide-binding protein [Acinetobacter baumannii
TCDC-AB0715]
Length = 383
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 189 GLDTTYPAQNKKLAEHILAKNGAIITEFLPG 219
>gi|294631663|ref|ZP_06710223.1| smf family protein [Streptomyces sp. e14]
gi|292834996|gb|EFF93345.1| smf family protein [Streptomyces sp. e14]
Length = 376
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L++ I + G+ + E+P G
Sbjct: 171 LACGVDRPYPRGHAALIDRIAEQ-GLVVGELPPG 203
>gi|162145885|ref|YP_001600343.1| DNA processing chain A [Gluconacetobacter diazotrophicus PAl 5]
gi|161784459|emb|CAP53989.1| putative DNA processing chain A [Gluconacetobacter diazotrophicus
PAl 5]
Length = 395
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPP++ L I + G+ ++E P G
Sbjct: 168 VAGGLDRPYPPDHAELQGRIAQH-GVVVTETPLG 200
>gi|218960463|ref|YP_001740238.1| DNA processing protein DprA, putative (fragment) [Candidatus
Cloacamonas acidaminovorans]
gi|167729120|emb|CAO80031.1| DNA processing protein DprA, putative (fragment) [Candidatus
Cloacamonas acidaminovorans]
Length = 362
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD +YPP N+ L E I +N G +SE G
Sbjct: 174 ASGLDNIYPPMNKTLAENICEN-GALVSEYEPG 205
>gi|296171474|ref|ZP_06852760.1| smf family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894160|gb|EFG73920.1| smf family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 250
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP + LL I G+ +E P G
Sbjct: 184 LAGGLDVPYPSGHSALLHRI-GQHGLLFTEYPPG 216
>gi|260655606|ref|ZP_05861092.1| DNA protecting protein DprA [Jonquetella anthropi E3_33 E1]
gi|260629659|gb|EEX47853.1| DNA protecting protein DprA [Jonquetella anthropi E3_33 E1]
Length = 366
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D ++P + L I +GG ISE P G
Sbjct: 170 LGTGVDVVWPRGHEELFSRIIGSGGSLISEYPLG 203
>gi|260907247|ref|ZP_05915569.1| DNA protecting protein DprA [Brevibacterium linens BL2]
Length = 404
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP N L +++ ++ G +SE G
Sbjct: 199 MAGGVDRFYPVANTELFQQVLED-GAIVSETAPG 231
>gi|150016069|ref|YP_001308323.1| DNA protecting protein DprA [Clostridium beijerinckii NCIMB 8052]
gi|149902534|gb|ABR33367.1| DNA protecting protein DprA [Clostridium beijerinckii NCIMB 8052]
Length = 351
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN+ L +I G+ ISE G
Sbjct: 167 LGCGIDRTYPSENKMLFSKI-AEKGVVISEFLLG 199
>gi|323359718|ref|YP_004226114.1| Rossmann fold nucleotide-binding protein [Microbacterium testaceum
StLB037]
gi|323276089|dbj|BAJ76234.1| predicted Rossmann fold nucleotide-binding protein [Microbacterium
testaceum StLB037]
Length = 387
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL+ I D G SE P G
Sbjct: 194 LAGGVDRAYPRGHEGLLDRIADT-GAVWSETPCG 226
>gi|306836382|ref|ZP_07469360.1| DNA protecting protein DprA [Corynebacterium accolens ATCC 49726]
gi|304567742|gb|EFM43329.1| DNA protecting protein DprA [Corynebacterium accolens ATCC 49726]
Length = 393
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A G+D YP NR L ++I DN G +SE
Sbjct: 193 ACGIDKNYPARNRGLFDQIADN-GCIVSE 220
>gi|226324651|ref|ZP_03800169.1| hypothetical protein COPCOM_02436 [Coprococcus comes ATCC 27758]
gi|225207099|gb|EEG89453.1| hypothetical protein COPCOM_02436 [Coprococcus comes ATCC 27758]
Length = 365
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG D YP ++ L +++ GG +SE P G
Sbjct: 171 LGGGADVCYPAAHKGLYKDLIKRGG-ILSEQPPG 203
>gi|317508418|ref|ZP_07966088.1| DNA recombination-mediator protein A [Segniliparus rugosus ATCC
BAA-974]
gi|316253265|gb|EFV12665.1| DNA recombination-mediator protein A [Segniliparus rugosus ATCC
BAA-974]
Length = 382
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L I N G +SE P G
Sbjct: 188 LACGVDVAYPAGHVQLFRRIAAN-GAVLSEYPPG 220
>gi|313206318|ref|YP_004045495.1| DNA protecting protein dpra [Riemerella anatipestifer DSM 15868]
gi|312445634|gb|ADQ81989.1| DNA protecting protein DprA [Riemerella anatipestifer DSM 15868]
gi|315023184|gb|EFT36195.1| Smf protein DNA processing chain A [Riemerella anatipestifer RA-YM]
gi|325336237|gb|ADZ12511.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Riemerella anatipestifer RA-GD]
Length = 367
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+A GL +YP +++ L EEI +NGG SE
Sbjct: 174 LAHGLHIIYPSKHKILAEEILNNGGALFSE 203
>gi|302558131|ref|ZP_07310473.1| SMF protein [Streptomyces griseoflavus Tu4000]
gi|302475749|gb|EFL38842.1| SMF protein [Streptomyces griseoflavus Tu4000]
Length = 386
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I + G+ + E+P G
Sbjct: 181 LACGVDRPYPRGHTGLIGRIAEQ-GLVVGELPPG 213
>gi|209543807|ref|YP_002276036.1| DNA protecting protein DprA [Gluconacetobacter diazotrophicus PAl
5]
gi|209531484|gb|ACI51421.1| DNA protecting protein DprA [Gluconacetobacter diazotrophicus PAl
5]
Length = 395
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YPP++ L I + G+ ++E P G
Sbjct: 168 VAGGLDRPYPPDHAELQGRIAQH-GVVVTETPLG 200
>gi|229552205|ref|ZP_04440930.1| Rossmann fold nucleotide-binding protein for DNA uptake
[Lactobacillus rhamnosus LMS2-1]
gi|229314427|gb|EEN80400.1| Rossmann fold nucleotide-binding protein for DNA uptake
[Lactobacillus rhamnosus LMS2-1]
Length = 271
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP +NR+L +I G+ +SE P G
Sbjct: 152 IANGIDQVYPAKNRSLQRQI-SRVGLVVSEYPPG 184
>gi|199599535|ref|ZP_03212923.1| Rossmann fold nucleotide-binding protein for DNA uptake
[Lactobacillus rhamnosus HN001]
gi|258508405|ref|YP_003171156.1| DNA processing SMF protein [Lactobacillus rhamnosus GG]
gi|199589576|gb|EDY97694.1| Rossmann fold nucleotide-binding protein for DNA uptake
[Lactobacillus rhamnosus HN001]
gi|257148332|emb|CAR87305.1| DNA processing SMF protein [Lactobacillus rhamnosus GG]
gi|259649720|dbj|BAI41882.1| putative DNA processing protein [Lactobacillus rhamnosus GG]
Length = 271
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP +NR+L +I G+ +SE P G
Sbjct: 152 IANGIDQVYPAKNRSLQRQI-SRVGLVVSEYPPG 184
>gi|57234466|ref|YP_181459.1| DNA processing protein DprA, putative [Dehalococcoides ethenogenes
195]
gi|57224914|gb|AAW39971.1| DNA processing protein DprA, putative [Dehalococcoides ethenogenes
195]
Length = 406
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN L +I +N G +SE P G
Sbjct: 208 CGLDIIYPSENSCLARQIAEN-GALVSEHPPG 238
>gi|332976751|gb|EGK13582.1| DNA processing protein DprA [Desmospora sp. 8437]
Length = 396
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP +R+L +E+ G ISE+P G
Sbjct: 205 LGCGVDVVYPRHHRDLYKEVV-RKGAVISEVPPG 237
>gi|258517150|ref|YP_003193372.1| DNA protecting protein DprA [Desulfotomaculum acetoxidans DSM 771]
gi|257780855|gb|ACV64749.1| DNA protecting protein DprA [Desulfotomaculum acetoxidans DSM 771]
Length = 368
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D YP E+R L++ I G+ +SE P
Sbjct: 171 LGCGVDVCYPAEHRGLMDRI-AEEGVLLSEYPP 202
>gi|258539619|ref|YP_003174118.1| DNA processing SMF protein [Lactobacillus rhamnosus Lc 705]
gi|257151295|emb|CAR90267.1| DNA processing SMF protein [Lactobacillus rhamnosus Lc 705]
Length = 271
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP +NR+L +I G+ +SE P G
Sbjct: 152 IANGIDQVYPAKNRSLQRQI-SRVGLVVSEYPPG 184
>gi|325473778|gb|EGC76966.1| DNA processing protein DprA [Treponema denticola F0402]
Length = 310
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G + +YP N+ L I ++GG +SE G
Sbjct: 174 LACGPEMIYPRSNKKLAANILESGGCILSEYAPG 207
>gi|17228820|ref|NP_485368.1| DNA processing protein [Nostoc sp. PCC 7120]
gi|17130672|dbj|BAB73282.1| DNA processing protein [Nostoc sp. PCC 7120]
Length = 372
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G+D +YP +NR+L ++I N G+ +SE P
Sbjct: 177 LGTGVDVVYPHKNRDLYQQILTN-GLVVSEYP 207
>gi|256847172|ref|ZP_05552618.1| DNA protecting protein DprA [Lactobacillus coleohominis 101-4-CHN]
gi|256715836|gb|EEU30811.1| DNA protecting protein DprA [Lactobacillus coleohominis 101-4-CHN]
Length = 293
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
GL+ +YPPE+ L +I + G+ ISE P
Sbjct: 171 GLNRIYPPEHDRLQRQIKRH-GLLISEYPL 199
>gi|332967865|gb|EGK06961.1| SMF-family protein [Kingella kingae ATCC 23330]
Length = 401
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N+ L +I G ISE P G
Sbjct: 185 GIDRIYPQSNQKLAYQI-AERGAIISEFPLG 214
>gi|253682393|ref|ZP_04863190.1| DNA protecting protein DprA [Clostridium botulinum D str. 1873]
gi|253562105|gb|EES91557.1| DNA protecting protein DprA [Clostridium botulinum D str. 1873]
Length = 359
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN+ L EI N G IS+ G
Sbjct: 169 LGSGIDVIYPKENKYLYSEIIKN-GCVISQFLPG 201
>gi|291557378|emb|CBL34495.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Eubacterium siraeum V10Sc8a]
Length = 492
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+A G+ YP + L + I DNGG+ +SE+
Sbjct: 167 LACGITIDYPNNSFGLRKNIIDNGGLILSEL 197
>gi|302525184|ref|ZP_07277526.1| DNA processing chain A [Streptomyces sp. AA4]
gi|302434079|gb|EFL05895.1| DNA processing chain A [Streptomyces sp. AA4]
Length = 390
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ +D YP N LL+ I GG +SE
Sbjct: 191 LGCAVDYSYPVGNSGLLDRIVAEGGAIVSEYAP 223
>gi|93007287|ref|YP_581724.1| DNA processing protein DprA, putative [Psychrobacter cryohalolentis
K5]
gi|92394965|gb|ABE76240.1| DNA processing protein DprA, putative [Psychrobacter cryohalolentis
K5]
Length = 407
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
M G+D YP + L +I + GG ISE+
Sbjct: 186 MGTGIDVNYPNHHDRLFSQIIEQGGCIISEL 216
>gi|219847449|ref|YP_002461882.1| DNA protecting protein DprA [Chloroflexus aggregans DSM 9485]
gi|219541708|gb|ACL23446.1| DNA protecting protein DprA [Chloroflexus aggregans DSM 9485]
Length = 362
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G D +YP NR L E+I G IS+ P G
Sbjct: 173 LACGADRVYPERNRILAEQIVT-AGALISDYPLG 205
>gi|312194959|ref|YP_004015020.1| DNA protecting protein DprA [Frankia sp. EuI1c]
gi|311226295|gb|ADP79150.1| DNA protecting protein DprA [Frankia sp. EuI1c]
Length = 414
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL+EI G+ +SE+P G
Sbjct: 186 LACGVDIPYPAAHLRLLDEI-RERGLLVSEVPPG 218
>gi|227488615|ref|ZP_03918931.1| DNA processing protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227543218|ref|ZP_03973267.1| DNA processing protein [Corynebacterium glucuronolyticum ATCC
51866]
gi|227091509|gb|EEI26821.1| DNA processing protein [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181027|gb|EEI61999.1| DNA processing protein [Corynebacterium glucuronolyticum ATCC
51866]
Length = 412
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD YP N +L I + G +SE P G
Sbjct: 214 ASGLDVTYPASNADLFARIATH-GCLVSEYPPG 245
>gi|146329048|ref|YP_001209084.1| DNA processing protein DprA [Dichelobacter nodosus VCS1703A]
gi|146232518|gb|ABQ13496.1| DNA processing protein DprA [Dichelobacter nodosus VCS1703A]
Length = 382
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +R L +I N G +SE P G
Sbjct: 179 GLDRVYPARHRELAHQIAAN-GAIVSEFPVG 208
>gi|166031219|ref|ZP_02234048.1| hypothetical protein DORFOR_00906 [Dorea formicigenerans ATCC
27755]
gi|166029066|gb|EDR47823.1| hypothetical protein DORFOR_00906 [Dorea formicigenerans ATCC
27755]
Length = 364
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G+D YP EN L +I GGI +IP
Sbjct: 171 LGCGVDICYPRENIGLYMDIQREGGIISEQIP 202
>gi|148269810|ref|YP_001244270.1| DNA protecting protein DprA [Thermotoga petrophila RKU-1]
gi|147735354|gb|ABQ46694.1| DNA protecting protein DprA [Thermotoga petrophila RKU-1]
Length = 337
Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N L EI N G +SE P G
Sbjct: 156 LGTGVDVVYPRSNERLFHEIVKN-GCVVSEYPMG 188
>gi|325267229|ref|ZP_08133892.1| DNA protecting protein DprA [Kingella denitrificans ATCC 33394]
gi|324981290|gb|EGC16939.1| DNA protecting protein DprA [Kingella denitrificans ATCC 33394]
Length = 397
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N+ L +I + G +SE P G
Sbjct: 178 GIDRIYPQSNQKLAYQIAEQ-GAIVSEFPLG 207
>gi|294791551|ref|ZP_06756708.1| DNA protecting protein DprA [Scardovia inopinata F0304]
gi|294458022|gb|EFG26376.1| DNA protecting protein DprA [Scardovia inopinata F0304]
Length = 356
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
AGGLD P N L + I ++ G ISE+P
Sbjct: 229 AGGLDTCGPHRNARLFQTIENHHGALISELPP 260
>gi|283778858|ref|YP_003369613.1| DNA protecting protein DprA [Pirellula staleyi DSM 6068]
gi|283437311|gb|ADB15753.1| DNA protecting protein DprA [Pirellula staleyi DSM 6068]
Length = 401
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL C+YPPE+ +L +EI G +SE P
Sbjct: 184 LGSGLACIYPPEHLDLAKEI-AEKGALLSEQPP 215
>gi|260438814|ref|ZP_05792630.1| DNA processing protein DprA [Butyrivibrio crossotus DSM 2876]
gi|292808803|gb|EFF68008.1| DNA processing protein DprA [Butyrivibrio crossotus DSM 2876]
Length = 360
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+AGG++ YP N NL +I + GG ISE P
Sbjct: 170 LAGGVEKCYPAGNFNLYMDIQNRGG-IISEYP 200
>gi|150398880|ref|YP_001322647.1| SMF family protein [Methanococcus vannielii SB]
gi|150011583|gb|ABR54035.1| SMF family protein [Methanococcus vannielii SB]
Length = 352
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
G LD ++P EN L E+I GG +SE+P
Sbjct: 207 GLLDPIFPKENMELSEKILKMGGFLVSELPP 237
>gi|289423506|ref|ZP_06425307.1| DNA protecting protein DprA [Peptostreptococcus anaerobius 653-L]
gi|289156008|gb|EFD04672.1| DNA protecting protein DprA [Peptostreptococcus anaerobius 653-L]
Length = 423
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 5 LDCLYPPENRNLLEEIWDNGGIAISEI 31
+D +YP +NR L +EI + GG+ +SE
Sbjct: 194 IDQVYPKKNRKLRDEILEKGGLILSEY 220
>gi|256425884|ref|YP_003126537.1| DNA protecting protein DprA [Chitinophaga pinensis DSM 2588]
gi|256040792|gb|ACU64336.1| DNA protecting protein DprA [Chitinophaga pinensis DSM 2588]
Length = 378
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+A GLD +YP ++R+ E+ DNGG+ ++E P
Sbjct: 181 LAHGLDRIYPQQHRSTAMEMIDNGGL-LTEFP 211
>gi|254422740|ref|ZP_05036458.1| DNA protecting protein DprA, putative [Synechococcus sp. PCC 7335]
gi|196190229|gb|EDX85193.1| DNA protecting protein DprA, putative [Synechococcus sp. PCC 7335]
Length = 411
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N++L +++ +N G+ +SE P G
Sbjct: 178 GVDIVYPARNQSLYQQVVEN-GLVVSEYPDG 207
>gi|171913964|ref|ZP_02929434.1| putative protein required for chromosomal DNA transformation
[Verrucomicrobium spinosum DSM 4136]
Length = 367
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G LYPPEN+ L E+I +N G ISE P
Sbjct: 172 IGSGHGKLYPPENKALAEKIAEN-GAVISEFPV 203
>gi|254463451|ref|ZP_05076867.1| DNA protecting protein DprA [Rhodobacterales bacterium HTCC2083]
gi|206680040|gb|EDZ44527.1| DNA protecting protein DprA [Rhodobacteraceae bacterium HTCC2083]
Length = 356
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D +YP E NL + D G +SE P G
Sbjct: 153 LAGGVDVIYPNEKLNLASSMLDE-GALLSEQPIG 185
>gi|168700980|ref|ZP_02733257.1| DNA protecting protein DprA [Gemmata obscuriglobus UQM 2246]
Length = 396
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGGL +YPPE+ +L E+ G ++E P
Sbjct: 172 LAGGLSSIYPPEHADLAAEV-AGNGCLVTETPM 203
>gi|270308041|ref|YP_003330099.1| Rossmann fold DNA uptake nucleotide-binding protein
[Dehalococcoides sp. VS]
gi|270153933|gb|ACZ61771.1| Rossmann fold DNA uptake nucleotide-binding protein
[Dehalococcoides sp. VS]
Length = 373
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN L +I +N G +SE P G
Sbjct: 175 CGLDIIYPSENSCLARQIAEN-GALVSEHPPG 205
>gi|159036855|ref|YP_001536108.1| DNA protecting protein DprA [Salinispora arenicola CNS-205]
gi|157915690|gb|ABV97117.1| DNA protecting protein DprA [Salinispora arenicola CNS-205]
Length = 452
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP N L + I D G+ +SE G
Sbjct: 223 LACGLDRPYPMGNAALFDRIADT-GLLVSEWMPG 255
>gi|254463787|ref|ZP_05077198.1| DNA protecting protein DprA [Rhodobacterales bacterium Y4I]
gi|206684695|gb|EDZ45177.1| DNA protecting protein DprA [Rhodobacterales bacterium Y4I]
Length = 365
Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG D +YP EN L EEI G+ +SE P G
Sbjct: 153 LAGGADVIYPAENTRLAEEIC-KTGLRLSEQPMG 185
>gi|297243647|ref|ZP_06927578.1| DNA-uptake Rossmann fold nucleotide-binding protein [Gardnerella
vaginalis AMD]
gi|296888398|gb|EFH27139.1| DNA-uptake Rossmann fold nucleotide-binding protein [Gardnerella
vaginalis AMD]
Length = 514
Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
AGGL+ + P N L E+I GG ISE+
Sbjct: 298 AGGLNHMGPRCNYQLFEQIIAKGGACISEL 327
>gi|116671018|ref|YP_831951.1| DNA protecting protein DprA [Arthrobacter sp. FB24]
gi|116611127|gb|ABK03851.1| DNA protecting protein DprA [Arthrobacter sp. FB24]
Length = 394
Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP N LL + N G ++E+P G
Sbjct: 197 MAGGVDRFYPSGNEELLRTV-ANQGAVLAEVPPG 229
>gi|222099410|ref|YP_002533978.1| DNA protecting protein DprA [Thermotoga neapolitana DSM 4359]
gi|221571800|gb|ACM22612.1| DNA protecting protein DprA [Thermotoga neapolitana DSM 4359]
Length = 337
Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N L I ++ G +SE P G
Sbjct: 156 LGAGVDVIYPRSNEGLFYRILES-GCVVSEYPMG 188
>gi|134299832|ref|YP_001113328.1| DNA protecting protein DprA [Desulfotomaculum reducens MI-1]
gi|134052532|gb|ABO50503.1| DNA protecting protein DprA [Desulfotomaculum reducens MI-1]
Length = 364
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D +YP EN L+++I + G I+E P G
Sbjct: 172 LGCGPDIVYPRENEKLMKQIIE-KGAIITEFPPG 204
>gi|310287689|ref|YP_003938947.1| SMF family protein [Bifidobacterium bifidum S17]
gi|309251625|gb|ADO53373.1| SMF family protein [Bifidobacterium bifidum S17]
Length = 504
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ P N L + I +NGG +SE+ G
Sbjct: 235 AGGLNHAGPQCNSELFDGIAENGGALVSELCPG 267
>gi|15643022|ref|NP_228064.1| DNA processing chain A [Thermotoga maritima MSB8]
gi|170288496|ref|YP_001738734.1| DNA protecting protein DprA [Thermotoga sp. RQ2]
gi|4980749|gb|AAD35341.1|AE001708_9 DNA processing chain A [Thermotoga maritima MSB8]
gi|170175999|gb|ACB09051.1| DNA protecting protein DprA [Thermotoga sp. RQ2]
Length = 337
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N L EI N G +SE P G
Sbjct: 156 LGTGVDVVYPRSNERLFHEIVKN-GCVVSEYPMG 188
>gi|302872580|ref|YP_003841216.1| DNA protecting protein DprA [Caldicellulosiruptor obsidiansis OB47]
gi|302575439|gb|ADL43230.1| DNA protecting protein DprA [Caldicellulosiruptor obsidiansis OB47]
Length = 365
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP EN L +I ++ G +SE G
Sbjct: 171 LGCGVDIVYPKENLKLYRQIIES-GCVVSEFLPG 203
>gi|258517114|ref|YP_003193336.1| Mg chelatase, subunit ChlI [Desulfotomaculum acetoxidans DSM 771]
gi|257780819|gb|ACV64713.1| Mg chelatase, subunit ChlI [Desulfotomaculum acetoxidans DSM 771]
Length = 748
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D YP E+R L++ I G+ +SE P
Sbjct: 551 LGCGVDVCYPAEHRGLMDRI-AEEGVLLSEYPP 582
>gi|189218918|ref|YP_001939559.1| DNA uptake Rossmann fold nucleotide-binding protein
[Methylacidiphilum infernorum V4]
gi|189185776|gb|ACD82961.1| Rossmann fold nucleotide-binding protein involved in DNA uptake
[Methylacidiphilum infernorum V4]
Length = 380
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP +N L E I G+ ISE P G
Sbjct: 183 LGSGIDHCYPAQNYELSERI-SAQGLLISEFPMG 215
>gi|269119854|ref|YP_003308031.1| SMF family protein [Sebaldella termitidis ATCC 33386]
gi|268613732|gb|ACZ08100.1| SMF family protein [Sebaldella termitidis ATCC 33386]
Length = 234
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD ++P E+R L E I +N G+ ISE P G
Sbjct: 163 GLDKIFPYESRKLWERIPEN-GMLISEYPPG 192
>gi|308180666|ref|YP_003924794.1| DNA processing protein [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046157|gb|ADN98700.1| DNA processing protein [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 288
Score = 34.8 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP ++R+L ++I G+ ISE P G
Sbjct: 172 GLDISYPRQHRDLQQQI-SQVGLLISEYPLG 201
>gi|325965583|ref|YP_004243487.1| DNA protecting protein DprA [Arthrobacter phenanthrenivorans Sphe3]
gi|323471670|gb|ADX75353.1| DNA protecting protein DprA [Arthrobacter phenanthrenivorans Sphe3]
Length = 302
Score = 34.8 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP N +L I N G+ +SE+P G
Sbjct: 184 LAGGLDRDYPSGNADLAAAIRAN-GLTLSELPPG 216
>gi|296535601|ref|ZP_06897782.1| DNA protecting protein DprA [Roseomonas cervicalis ATCC 49957]
gi|296264117|gb|EFH10561.1| DNA protecting protein DprA [Roseomonas cervicalis ATCC 49957]
Length = 364
Score = 34.8 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GGLD YPPE+ L + + G+ ++E P G
Sbjct: 166 GGLDRAYPPEHAEL-QSLIAERGLVVAEAPLG 196
>gi|291531139|emb|CBK96724.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Eubacterium siraeum 70/3]
Length = 500
Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+A G+ YP + L + I DNGG+ +SE+
Sbjct: 167 LACGITIDYPNNSFGLRKNIIDNGGLILSEL 197
>gi|297202659|ref|ZP_06920056.1| DNA processing Smf-family protein [Streptomyces sviceus ATCC 29083]
gi|197713234|gb|EDY57268.1| DNA processing Smf-family protein [Streptomyces sviceus ATCC 29083]
Length = 385
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I + G+ I E+P G
Sbjct: 180 LACGVDRPYPRGHAQLITRIAEQ-GLVIGELPPG 212
>gi|197104784|ref|YP_002130161.1| dprA protein [Phenylobacterium zucineum HLK1]
gi|196478204|gb|ACG77732.1| dprA protein [Phenylobacterium zucineum HLK1]
Length = 362
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GG+D +YPPE+R L E + + G +SE G
Sbjct: 169 LGGGIDDVYPPEHRPLYERLVE-AGCVVSESEPG 201
>gi|118617634|ref|YP_905966.1| hypothetical protein MUL_2062 [Mycobacterium ulcerans Agy99]
gi|118569744|gb|ABL04495.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length = 391
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LL I G+ ++E P G
Sbjct: 183 LAGGIDIPYPTGHSALLHWI-GQHGLLVTEYPPG 215
>gi|313905318|ref|ZP_07838684.1| DNA protecting protein DprA [Eubacterium cellulosolvens 6]
gi|313469788|gb|EFR65124.1| DNA protecting protein DprA [Eubacterium cellulosolvens 6]
Length = 375
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP +N L I GG ISE G
Sbjct: 125 LGTGVDVCYPKQNYALYRRIIREGGGIISEFEPG 158
>gi|167750872|ref|ZP_02422999.1| hypothetical protein EUBSIR_01856 [Eubacterium siraeum DSM 15702]
gi|167656051|gb|EDS00181.1| hypothetical protein EUBSIR_01856 [Eubacterium siraeum DSM 15702]
Length = 500
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+A G+ YP + L + I DNGG+ +SE+
Sbjct: 167 LACGITIDYPNNSFGLRKNIIDNGGLILSEL 197
>gi|254361451|ref|ZP_04977591.1| SMF family Rossmann fold nucleotide-binding protein [Mannheimia
haemolytica PHL213]
gi|153092961|gb|EDN73987.1| SMF family Rossmann fold nucleotide-binding protein [Mannheimia
haemolytica PHL213]
Length = 382
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP ++ L E+I D GG +SE
Sbjct: 169 LGSGLNQVYPARHKKLAEQIVDLGGALVSE 198
>gi|302036384|ref|YP_003796706.1| protein SMF, putative DNA protecting protein DprA [Candidatus
Nitrospira defluvii]
gi|300604448|emb|CBK40780.1| Protein SMF, putative DNA protecting protein DprA [Candidatus
Nitrospira defluvii]
Length = 378
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP ++R L E I + G +SE+P G
Sbjct: 176 MGCGLDRTYPADHRQLRETI-EQHGAVLSELPLG 208
>gi|300774691|ref|ZP_07084554.1| SMF family DNA processing protein [Chryseobacterium gleum ATCC
35910]
gi|300506506|gb|EFK37641.1| SMF family DNA processing protein [Chryseobacterium gleum ATCC
35910]
Length = 369
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+A G LYP +NR L E+I + GG I+E
Sbjct: 173 LAHGFQYLYPAKNRRLSEKILNEGGALITE 202
>gi|119509167|ref|ZP_01628318.1| SMF protein [Nodularia spumigena CCY9414]
gi|119466333|gb|EAW47219.1| SMF protein [Nodularia spumigena CCY9414]
Length = 372
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ G+D +YPP+NR+L ++I G+ +SE
Sbjct: 177 LGTGVDVIYPPKNRDLYKQILTQ-GLVVSEY 206
>gi|50083491|ref|YP_045001.1| putative Rossmann-fold nucleotide-binding protein [Acinetobacter
sp. ADP1]
gi|49529467|emb|CAG67179.1| putative Rossmann-fold nucleotide-binding protein involved in DNA
uptake (Smf) [Acinetobacter sp. ADP1]
Length = 383
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP N+ L + I D GG +SE G
Sbjct: 182 GLDLCYPSGNKALKQHIRDQGGAIVSEFLPG 212
>gi|311064587|ref|YP_003971312.1| Smf family protein [Bifidobacterium bifidum PRL2010]
gi|310866906|gb|ADP36275.1| Smf family protein [Bifidobacterium bifidum PRL2010]
Length = 504
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ P N L + I +NGG +SE+ G
Sbjct: 235 AGGLNHAGPQCNSELFDGIAENGGALVSELCPG 267
>gi|237806931|ref|YP_002891371.1| DNA protecting protein DprA [Tolumonas auensis DSM 9187]
gi|237499192|gb|ACQ91785.1| DNA protecting protein DprA [Tolumonas auensis DSM 9187]
Length = 374
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISE 30
GL +YP +++ L +I + GG ISE
Sbjct: 179 CGLRHVYPAKHKRLASQILEQGGALISE 206
>gi|223937270|ref|ZP_03629176.1| SMF family protein [bacterium Ellin514]
gi|223894055|gb|EEF60510.1| SMF family protein [bacterium Ellin514]
Length = 252
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ ++PPEN +L E I N G +S+ PF
Sbjct: 56 LGTGINLVFPPENADLFERIAAN-GAVLSQFPF 87
>gi|322506376|gb|ADX01830.1| Rossmann-fold nucleotide-binding protein [Acinetobacter baumannii
1656-2]
Length = 376
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 182 GLDTTYPAQNKKLAEYILAKNGAIITEFLPG 212
>gi|311696637|gb|ADP99510.1| DNA protecting protein DprA [marine bacterium HP15]
Length = 380
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP ++R L E + + G+ ISE P G
Sbjct: 180 IGCGLDRVYPHQHRRLGERVVAD-GLMISEYPPG 212
>gi|295696103|ref|YP_003589341.1| DNA protecting protein DprA [Bacillus tusciae DSM 2912]
gi|295411705|gb|ADG06197.1| DNA protecting protein DprA [Bacillus tusciae DSM 2912]
Length = 384
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGG LYPPE+R+L + G ISE P
Sbjct: 184 LAGGFHHLYPPEHRSLAAAV-ARSGALISEQPP 215
>gi|289768831|ref|ZP_06528209.1| DNA processing Smf-family protein [Streptomyces lividans TK24]
gi|289699030|gb|EFD66459.1| DNA processing Smf-family protein [Streptomyces lividans TK24]
Length = 413
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YPP + L+ I + G+ + E+P G
Sbjct: 210 CGVDRPYPPGHTALITRIAEQ-GLVVGELPPG 240
>gi|281412306|ref|YP_003346385.1| DNA protecting protein DprA [Thermotoga naphthophila RKU-10]
gi|281373409|gb|ADA66971.1| DNA protecting protein DprA [Thermotoga naphthophila RKU-10]
Length = 337
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N L EI N G +SE P G
Sbjct: 156 LGTGVDVVYPRSNERLFHEIVKN-GCVVSEYPMG 188
>gi|210622560|ref|ZP_03293242.1| hypothetical protein CLOHIR_01190 [Clostridium hiranonis DSM 13275]
gi|210154143|gb|EEA85149.1| hypothetical protein CLOHIR_01190 [Clostridium hiranonis DSM 13275]
Length = 379
Score = 34.8 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G+D P N L+ +I D+GG ISE
Sbjct: 179 LGSGIDNPLPKTNIWLMNKIVDSGGAVISE 208
>gi|332875642|ref|ZP_08443454.1| DNA protecting protein DprA [Acinetobacter baumannii 6014059]
gi|332736215|gb|EGJ67230.1| DNA protecting protein DprA [Acinetobacter baumannii 6014059]
Length = 383
Score = 34.8 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP +N+ L E I G I+E G
Sbjct: 189 GLDTTYPAQNKKLAEYILAKNGAIITEFLPG 219
>gi|282856249|ref|ZP_06265532.1| DNA protecting protein DprA [Pyramidobacter piscolens W5455]
gi|282586008|gb|EFB91293.1| DNA protecting protein DprA [Pyramidobacter piscolens W5455]
Length = 355
Score = 34.8 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D ++PPE+ L + I G +SE P G
Sbjct: 167 LGTGVDVVWPPEHDELFDNIL-RRGALLSEYPLG 199
>gi|148658666|ref|YP_001278871.1| DNA protecting protein DprA [Roseiflexus sp. RS-1]
gi|148570776|gb|ABQ92921.1| DNA protecting protein DprA [Roseiflexus sp. RS-1]
Length = 360
Score = 34.8 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP + L I D+ G ISE P G
Sbjct: 171 LPCGIDLVYPERHDTLARRITDH-GALISEFPPG 203
>gi|72161075|ref|YP_288732.1| SMF protein [Thermobifida fusca YX]
gi|71914807|gb|AAZ54709.1| SMF protein [Thermobifida fusca YX]
Length = 394
Score = 34.8 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L E+ ++ G+ +SE P G
Sbjct: 192 LACGVDLAYPKGHEQLFAEVVNH-GVVVSEYPPG 224
>gi|330720128|gb|EGG98532.1| Rossmann fold nucleotide-binding protein Smf possibly involved in
DNA uptake [gamma proteobacterium IMCC2047]
Length = 383
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G+D +YP ++ L ++I G ++E P G
Sbjct: 184 MATGIDQIYPKQHVALAQQI-RQRGALVTEFPLG 216
>gi|259503395|ref|ZP_05746297.1| DNA protecting protein DprA [Lactobacillus antri DSM 16041]
gi|259168640|gb|EEW53135.1| DNA protecting protein DprA [Lactobacillus antri DSM 16041]
Length = 285
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD YPPENR L +E + G+ +SE G
Sbjct: 168 VGCGLDRAYPPENRQL-QEAVADRGLVLSEYGRG 200
>gi|193873566|gb|ACF23472.1| DNA protecting protein [uncultured bacterium]
Length = 160
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +N L I + GI +SE P G
Sbjct: 72 GLDRVYPRQNLGLARRIAAH-GILVSEYPLG 101
>gi|254556723|ref|YP_003063140.1| DNA processing protein [Lactobacillus plantarum JDM1]
gi|254045650|gb|ACT62443.1| DNA processing protein [Lactobacillus plantarum JDM1]
Length = 288
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP ++R+L ++I G+ ISE P G
Sbjct: 172 GLDISYPRQHRDLQQQI-SQVGLLISEYPLG 201
>gi|257463631|ref|ZP_05628022.1| Smf protein [Fusobacterium sp. D12]
gi|317061183|ref|ZP_07925668.1| SMF family protein [Fusobacterium sp. D12]
gi|313686859|gb|EFS23694.1| SMF family protein [Fusobacterium sp. D12]
Length = 283
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +N NL + + G+ +SE P G
Sbjct: 100 GLDEIYPKQNTNLWKRV-AKEGLLVSEYPLG 129
>gi|297544718|ref|YP_003677020.1| DNA protecting protein DprA [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842493|gb|ADH61009.1| DNA protecting protein DprA [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 362
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEEGLLVSEFPL 202
>gi|226366014|ref|YP_002783797.1| DNA processing protein [Rhodococcus opacus B4]
gi|226244504|dbj|BAH54852.1| putative DNA processing protein [Rhodococcus opacus B4]
Length = 384
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL +I G ISE G
Sbjct: 193 LACGVDRAYPSGHARLLRQI-AQNGAVISEYAPG 225
>gi|325272508|ref|ZP_08138886.1| DNA protecting protein DprA [Pseudomonas sp. TJI-51]
gi|324102369|gb|EGB99837.1| DNA protecting protein DprA [Pseudomonas sp. TJI-51]
Length = 285
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP + L + I D+GG +SE P
Sbjct: 101 LGTGLQKLYPQRHTALAQAIIDSGGALVSEYPL 133
>gi|261250602|ref|ZP_05943177.1| rossmann fold nucleotide-binding protein Smf possibly involved in
DNA uptake [Vibrio orientalis CIP 102891]
gi|260939171|gb|EEX95158.1| rossmann fold nucleotide-binding protein Smf possibly involved in
DNA uptake [Vibrio orientalis CIP 102891]
Length = 371
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP +R+L I D+GG +SE
Sbjct: 171 LGCGLNTIYPARHRDLALRIIDSGGALVSE 200
>gi|227486583|ref|ZP_03916899.1| SMF family DNA processing protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235401|gb|EEI85416.1| SMF family DNA processing protein [Anaerococcus lactolyticus ATCC
51172]
Length = 363
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+D +YP N+ L E+I + G+ +SE P
Sbjct: 172 IGCGIDQVYPTANKFLYEKI-EEDGLILSEFPL 203
>gi|291520056|emb|CBK75277.1| Predicted Rossmann fold nucleotide-binding protein involved in DNA
uptake [Butyrivibrio fibrisolvens 16/4]
Length = 256
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP E+ L ++ G IS+ P G
Sbjct: 177 GLDIYYPREHMELF-DMISQNGAVISQFPPG 206
>gi|224283319|ref|ZP_03646641.1| hypothetical protein BbifN4_05770 [Bifidobacterium bifidum NCIMB
41171]
gi|313140471|ref|ZP_07802664.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132981|gb|EFR50598.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 504
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGGL+ P N L + I +NGG +SE+ G
Sbjct: 235 AGGLNHAGPQCNSELFDGIAENGGALVSELCPG 267
>gi|116333444|ref|YP_794971.1| Rossmann fold nucleotide-binding protein for DNA uptake
[Lactobacillus brevis ATCC 367]
gi|116098791|gb|ABJ63940.1| Rossmann fold nucleotide-binding protein for DNA uptake
[Lactobacillus brevis ATCC 367]
Length = 296
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP NR+L+ E+ + + ISE P+G
Sbjct: 178 GLDHCYPAGNRDLMTELAHHH-LVISEYPWG 207
>gi|28378509|ref|NP_785401.1| DNA processing protein [Lactobacillus plantarum WCFS1]
gi|300767455|ref|ZP_07077367.1| DNA protecting protein DprA [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|28271345|emb|CAD64250.1| DNA processing protein [Lactobacillus plantarum WCFS1]
gi|300495274|gb|EFK30430.1| DNA protecting protein DprA [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 288
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP ++R+L ++I G+ ISE P G
Sbjct: 172 GLDISYPRQHRDLQQQI-SQVGLLISEYPLG 201
>gi|289578442|ref|YP_003477069.1| DNA protecting protein DprA [Thermoanaerobacter italicus Ab9]
gi|289528155|gb|ADD02507.1| DNA protecting protein DprA [Thermoanaerobacter italicus Ab9]
Length = 362
Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEEGLLVSEFPL 202
>gi|256784938|ref|ZP_05523369.1| DNA processing Smf-family protein [Streptomyces lividans TK24]
Length = 432
Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 3 GGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YPP + L+ I + G+ + E+P G
Sbjct: 229 CGVDRPYPPGHTALITRIAEQ-GLVVGELPPG 259
>gi|86742265|ref|YP_482665.1| DNA processing protein DprA [Frankia sp. CcI3]
gi|86569127|gb|ABD12936.1| DNA protecting protein DprA [Frankia sp. CcI3]
Length = 446
Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D YP + LLEEI G +SE+ G
Sbjct: 195 LAGGVDVPYPTAHVELLEEI-ARTGAVVSEVSPG 227
>gi|146313351|ref|YP_001178425.1| DNA protecting protein DprA [Enterobacter sp. 638]
gi|145320227|gb|ABP62374.1| DNA protecting protein DprA [Enterobacter sp. 638]
Length = 374
Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP + +L ++I + GG ISE P
Sbjct: 167 LGNGLSGIYPKRHASLADKIIEAGGAVISEFPL 199
>gi|310658803|ref|YP_003936524.1| DNA processing protein [Clostridium sticklandii DSM 519]
gi|308825581|emb|CBH21619.1| DNA processing protein (smf family) (modular protein) [Clostridium
sticklandii]
Length = 356
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ + YP N L++ + D+GG+ ISE
Sbjct: 166 LGSSITKPYPKTNAKLMQSVIDSGGLVISEY 196
>gi|301058272|ref|ZP_07199312.1| DNA protecting protein DprA [delta proteobacterium NaphS2]
gi|300447606|gb|EFK11331.1| DNA protecting protein DprA [delta proteobacterium NaphS2]
Length = 369
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D +YP N+ L E+I + G +SE P G
Sbjct: 176 LGTGIDVVYPGSNQKLFEKIME-AGAIVSEFPMG 208
>gi|227115517|ref|ZP_03829173.1| hypothetical protein PcarbP_21290 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 364
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP + L E I GG +SE P
Sbjct: 158 LGSGLKNIYPKRHAKLAERICGGGGALVSEFPL 190
>gi|167645473|ref|YP_001683136.1| DNA protecting protein DprA [Caulobacter sp. K31]
gi|167347903|gb|ABZ70638.1| DNA protecting protein DprA [Caulobacter sp. K31]
Length = 366
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GG+ +YPPE+ L I GG +SE
Sbjct: 170 LGGGVCDIYPPEHAALHARIAGEGGCIVSE 199
>gi|33599233|ref|NP_886793.1| hypothetical protein BB0244 [Bordetella bronchiseptica RB50]
gi|33575279|emb|CAE30742.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
Length = 370
Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D +YP +R+L I + G +SE+P G
Sbjct: 182 MGTGIDRIYPAAHRDLAHRIVQH-GALVSELPLG 214
>gi|284032637|ref|YP_003382568.1| DNA protecting protein DprA [Kribbella flavida DSM 17836]
gi|283811930|gb|ADB33769.1| DNA protecting protein DprA [Kribbella flavida DSM 17836]
Length = 445
Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP N L + I G+ +SE+P G
Sbjct: 246 LACGVDVSYPKRNSALFDRI-AAEGLLLSELPPG 278
>gi|33594956|ref|NP_882599.1| hypothetical protein BPP0240 [Bordetella parapertussis 12822]
gi|33565032|emb|CAE39981.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 370
Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D +YP +R+L I + G +SE+P G
Sbjct: 182 MGTGIDRIYPAAHRDLAHRIVQH-GALVSELPLG 214
>gi|256750729|ref|ZP_05491614.1| DNA protecting protein DprA [Thermoanaerobacter ethanolicus CCSD1]
gi|256750312|gb|EEU63331.1| DNA protecting protein DprA [Thermoanaerobacter ethanolicus CCSD1]
Length = 362
Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEEGLLVSEFPL 202
>gi|163791332|ref|ZP_02185745.1| DNA processing protein DprA, putative [Carnobacterium sp. AT7]
gi|159873411|gb|EDP67502.1| DNA processing protein DprA, putative [Carnobacterium sp. AT7]
Length = 289
Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP EN L +EI N + ISE P G
Sbjct: 175 GLDQFYPFENEKLQKEIAKNH-LLISEYPLG 204
>gi|158522455|ref|YP_001530325.1| DNA protecting protein DprA [Desulfococcus oleovorans Hxd3]
gi|158511281|gb|ABW68248.1| DNA protecting protein DprA [Desulfococcus oleovorans Hxd3]
Length = 389
Score = 34.4 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YPPEN L I G ISE P
Sbjct: 171 LGSGLCRIYPPENMELARRI-AGQGAVISEFPL 202
>gi|75909996|ref|YP_324292.1| SMF protein [Anabaena variabilis ATCC 29413]
gi|75703721|gb|ABA23397.1| SMF protein [Anabaena variabilis ATCC 29413]
Length = 372
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G+D +YP +NR+L ++I N G+ +SE P
Sbjct: 177 LGTGVDVVYPHKNRDLYKQILTN-GLVVSEYP 207
>gi|325963703|ref|YP_004241609.1| DNA protecting protein DprA [Arthrobacter phenanthrenivorans Sphe3]
gi|323469790|gb|ADX73475.1| DNA protecting protein DprA [Arthrobacter phenanthrenivorans Sphe3]
Length = 400
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP N +LL + N G ++E+P G
Sbjct: 203 MAGGVDRFYPSGNEDLLRAVC-NQGAVLAEVPPG 235
>gi|261823199|ref|YP_003261305.1| DNA protecting protein DprA [Pectobacterium wasabiae WPP163]
gi|261607212|gb|ACX89698.1| DNA protecting protein DprA [Pectobacterium wasabiae WPP163]
Length = 373
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + L E I +GG +SE P
Sbjct: 167 LGSGLENIYPKRHAKLAERICGDGGALVSEFPL 199
>gi|310765563|gb|ADP10513.1| DNA protecting protein [Erwinia sp. Ejp617]
Length = 374
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL +YP +++ L +I D+GG +SE P
Sbjct: 167 LGSGLQAVYPRQHQALARQIIDSGGALVSEFPL 199
>gi|227503374|ref|ZP_03933423.1| DNA processing protein [Corynebacterium accolens ATCC 49725]
gi|227075877|gb|EEI13840.1| DNA processing protein [Corynebacterium accolens ATCC 49725]
Length = 393
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A G+D YP N L ++I DN G +SE
Sbjct: 193 ACGIDKNYPARNGGLFDQIADN-GCIVSE 220
>gi|294782849|ref|ZP_06748175.1| DNA processing chain A [Fusobacterium sp. 1_1_41FAA]
gi|294481490|gb|EFG29265.1| DNA processing chain A [Fusobacterium sp. 1_1_41FAA]
Length = 304
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MAGGLD-CLYPPENRNLLEEIWDNGGIAISEI 31
+ GLD +YP EN NL++ I +N G +SE+
Sbjct: 183 LGQGLDLEIYPRENINLVDRILENNGFLLSEL 214
>gi|283783113|ref|YP_003373867.1| DNA protecting protein DprA [Gardnerella vaginalis 409-05]
gi|298253874|ref|ZP_06977461.1| DNA-uptake Rossmann fold nucleotide-binding protein [Gardnerella
vaginalis 5-1]
gi|283441767|gb|ADB14233.1| DNA protecting protein DprA [Gardnerella vaginalis 409-05]
gi|297532017|gb|EFH70992.1| DNA-uptake Rossmann fold nucleotide-binding protein [Gardnerella
vaginalis 5-1]
Length = 514
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
AGGL+ + P N L E+I GG+ ISE+
Sbjct: 298 AGGLNHMGPRCNYQLFEQIIAKGGVCISEL 327
>gi|26986814|ref|NP_742239.1| DNA protecting protein DprA [Pseudomonas putida KT2440]
gi|24981411|gb|AAN65703.1|AE016197_1 smf protein [Pseudomonas putida KT2440]
Length = 365
Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP +R+L + + DNG +SE P
Sbjct: 181 LGTGLQKLYPQRHRDLAQAMIDNGSALVSEYPL 213
>gi|310778327|ref|YP_003966660.1| DNA protecting protein DprA [Ilyobacter polytropus DSM 2926]
gi|309747650|gb|ADO82312.1| DNA protecting protein DprA [Ilyobacter polytropus DSM 2926]
Length = 357
Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP EN + E + + G ISE P G
Sbjct: 170 GLDIVYPQENSKIWERM-EREGTIISEFPLG 199
>gi|256824961|ref|YP_003148921.1| DNA protecting protein DprA [Kytococcus sedentarius DSM 20547]
gi|256688354|gb|ACV06156.1| DNA protecting protein DprA [Kytococcus sedentarius DSM 20547]
Length = 371
Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGG+D LYP N +LL E+ G +SE G
Sbjct: 178 LAGGVDRLYPAGNADLLTEVV-RTGAVVSESAPG 210
>gi|255325243|ref|ZP_05366349.1| DNA protecting protein DprA [Corynebacterium tuberculostearicum
SK141]
gi|255297808|gb|EET77119.1| DNA protecting protein DprA [Corynebacterium tuberculostearicum
SK141]
Length = 393
Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A G+D YP N NL +I DN G +SE
Sbjct: 193 ACGIDRDYPARNANLFAKIADN-GCIVSE 220
>gi|23099000|ref|NP_692466.1| DNA processing protein [Oceanobacillus iheyensis HTE831]
gi|22777228|dbj|BAC13501.1| DNA processing protein (Smf family) [Oceanobacillus iheyensis
HTE831]
Length = 294
Score = 34.4 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GG +YP E+ +L EI G+ ++E P
Sbjct: 172 LGGGFHHIYPREHLSLFHEI-TQKGLVLTEYPP 203
>gi|240948039|ref|ZP_04752456.1| Smf protein [Actinobacillus minor NM305]
gi|240297655|gb|EER48132.1| Smf protein [Actinobacillus minor NM305]
Length = 382
Score = 34.4 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL +YP ++ L E+I + GG +SE
Sbjct: 169 LGSGLAQIYPARHKKLAEQIIEKGGALVSE 198
>gi|221638586|ref|YP_002524848.1| DNA protecting protein DprA [Rhodobacter sphaeroides KD131]
gi|221159367|gb|ACM00347.1| DNA protecting protein DprA [Rhodobacter sphaeroides KD131]
Length = 372
Score = 34.4 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L EI G ISE P G
Sbjct: 177 AGGVDVIYPAENAGLAAEI-AARGCRISEQPMG 208
>gi|220912959|ref|YP_002488268.1| DNA protecting protein DprA [Arthrobacter chlorophenolicus A6]
gi|219859837|gb|ACL40179.1| DNA protecting protein DprA [Arthrobacter chlorophenolicus A6]
Length = 402
Score = 34.4 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG+D YP N +LL + N G ++E+P G
Sbjct: 205 MAGGVDRFYPSGNEDLLRAVC-NQGAVLAEVPPG 237
>gi|313496441|gb|ADR57807.1| DprA [Pseudomonas putida BIRD-1]
Length = 365
Score = 34.4 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP +R+L + + DNG +SE P
Sbjct: 181 LGTGLQKLYPQRHRDLAQAMIDNGSALVSEYPL 213
>gi|270602100|ref|ZP_06221567.1| smf protein [Haemophilus influenzae HK1212]
gi|270318248|gb|EFA29440.1| smf protein [Haemophilus influenzae HK1212]
Length = 144
Score = 34.4 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP +++ L +I +N G +SE
Sbjct: 93 LGSGLEQIYPSKHQRLSAQIIENNGALVSE 122
>gi|311739717|ref|ZP_07713552.1| DNA protecting protein DprA [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305533|gb|EFQ81601.1| DNA protecting protein DprA [Corynebacterium pseudogenitalium ATCC
33035]
Length = 393
Score = 34.4 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
A G+D YP N NL +I DN G +SE
Sbjct: 193 ACGIDRDYPARNANLFAKIADN-GCIVSE 220
>gi|261867100|ref|YP_003255022.1| DNA-processing chain A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412432|gb|ACX81803.1| protein smf (DNA-processing chain A) [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 372
Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP ++R L + I ++GG +SE
Sbjct: 170 LGSGLEEVYPAKHRKLAQNIIEHGGALVSE 199
>gi|237740066|ref|ZP_04570547.1| DNA processing chain A [Fusobacterium sp. 2_1_31]
gi|229422083|gb|EEO37130.1| DNA processing chain A [Fusobacterium sp. 2_1_31]
Length = 267
Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MAGGLD-CLYPPENRNLLEEIWDNGGIAISEI 31
+ GLD +YP EN NL E+I +N G +SE+
Sbjct: 183 LGQGLDLEIYPRENINLAEKILENNGFLLSEL 214
>gi|28867415|ref|NP_790034.1| DNA processing protein DprA [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28850649|gb|AAO53729.1| DNA processing protein DprA, putative [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 394
Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP ++R L +I GG ISE P
Sbjct: 204 LGTGLGKLYPQQHRALATQIAAQGGAVISEFPL 236
>gi|33591759|ref|NP_879403.1| hypothetical protein BP0555 [Bordetella pertussis Tohama I]
gi|33571402|emb|CAE44883.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332381176|gb|AEE66023.1| hypothetical protein BPTD_0564 [Bordetella pertussis CS]
Length = 370
Score = 34.0 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D +YP +R+L I + G +SE+P G
Sbjct: 182 MGTGIDRIYPAAHRDLAHRIVQH-GALVSELPLG 214
>gi|170783523|ref|YP_001742016.1| putative smf family protein [Arthrobacter sp. AK-1]
gi|150035010|gb|ABR67021.1| putative smf family protein [Arthrobacter sp. AK-1]
Length = 302
Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+AGGLD YP N +L I G+ +SE+P G
Sbjct: 184 LAGGLDRDYPSGNADLAAAI-RGTGLTLSELPPG 216
>gi|237801644|ref|ZP_04590105.1| DNA processing protein DprA [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331024503|gb|EGI04559.1| DNA processing protein DprA [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 371
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ++R L + + GG ISE P
Sbjct: 181 LGTGLEKLYPQQHRALADRMAAQGGAVISEFPL 213
>gi|145593869|ref|YP_001158166.1| DNA protecting protein DprA [Salinispora tropica CNB-440]
gi|145303206|gb|ABP53788.1| DNA protecting protein DprA [Salinispora tropica CNB-440]
Length = 444
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP N L + I D G+ +SE G
Sbjct: 222 LACGLDRPYPMGNAALFDRIADT-GLLVSEWIPG 254
>gi|145224718|ref|YP_001135396.1| DNA protecting protein DprA [Mycobacterium gilvum PYR-GCK]
gi|315445048|ref|YP_004077927.1| DNA protecting protein DprA [Mycobacterium sp. Spyr1]
gi|145217204|gb|ABP46608.1| DNA protecting protein DprA [Mycobacterium gilvum PYR-GCK]
gi|315263351|gb|ADU00093.1| DNA protecting protein DprA [Mycobacterium sp. Spyr1]
Length = 388
Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A GLD YP + LL + G+ +SE P G
Sbjct: 184 LAAGLDVPYPAGHSALLHRV-GKHGLLVSEYPPG 216
>gi|328462260|gb|EGF34367.1| DNA processing SMF protein [Lactobacillus rhamnosus MTCC 5462]
Length = 190
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D +YP +NR+L +I G+ +SE P G
Sbjct: 148 IANGIDQVYPAKNRSLQRQI-SRVGLVVSEYPPG 180
>gi|29829173|ref|NP_823807.1| DNA processing Smf-family protein [Streptomyces avermitilis
MA-4680]
gi|29606279|dbj|BAC70342.1| putative DNA processing Smf-family protein [Streptomyces
avermitilis MA-4680]
Length = 381
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I + G+ + E+P G
Sbjct: 176 LACGVDQPYPRGHTELITRIAEQ-GLVVGELPPG 208
>gi|326382894|ref|ZP_08204584.1| DNA protecting protein DprA [Gordonia neofelifaecis NRRL B-59395]
gi|326198484|gb|EGD55668.1| DNA protecting protein DprA [Gordonia neofelifaecis NRRL B-59395]
Length = 374
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + LL EI G ++E P G
Sbjct: 182 LACGIDRDYPAGHAQLLREI-GERGAVLTEYPPG 214
>gi|220907030|ref|YP_002482341.1| DNA protecting protein DprA [Cyanothece sp. PCC 7425]
gi|219863641|gb|ACL43980.1| DNA protecting protein DprA [Cyanothece sp. PCC 7425]
Length = 370
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIP 32
G+D +YPP N+ L E+I G+ +SE P
Sbjct: 180 GVDLVYPPRNKFLYEKILQQ-GLVLSEYP 207
>gi|160896284|ref|YP_001561866.1| DNA protecting protein DprA [Delftia acidovorans SPH-1]
gi|160361868|gb|ABX33481.1| DNA protecting protein DprA [Delftia acidovorans SPH-1]
Length = 405
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP + L E+ + G+ +SE P G
Sbjct: 207 GLDQVYPRRHIGLAREVASH-GLIVSEYPLG 236
>gi|146296271|ref|YP_001180042.1| DNA protecting protein DprA [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145409847|gb|ABP66851.1| DNA protecting protein DprA [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 380
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G+D +YP EN L +I + G ISE
Sbjct: 188 LGCGVDIVYPKENYKLYNQIVE-KGCVISE 216
>gi|258545463|ref|ZP_05705697.1| DNA processing protein DprA [Cardiobacterium hominis ATCC 15826]
gi|258519296|gb|EEV88155.1| DNA processing protein DprA [Cardiobacterium hominis ATCC 15826]
Length = 369
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP + +L I G +SE P G
Sbjct: 178 GLDRVYPARHHDLAHRI-SAQGAIVSEYPIG 207
>gi|253690149|ref|YP_003019339.1| DNA protecting protein DprA [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756727|gb|ACT14803.1| DNA protecting protein DprA [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 373
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ +YP + L E I +GG +SE P
Sbjct: 167 LGSGLENIYPKRHAKLAERICGDGGALVSEFPL 199
>gi|90415411|ref|ZP_01223345.1| DNA processing chain A [marine gamma proteobacterium HTCC2207]
gi|90332734|gb|EAS47904.1| DNA processing chain A [marine gamma proteobacterium HTCC2207]
Length = 360
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
MA G++ +YP + L E+I D GG I+E
Sbjct: 174 MATGIEAVYPRAHLKLAEQIIDQGGTLITE 203
>gi|261491953|ref|ZP_05988530.1| SMF family Rossmann fold nucleotide-binding protein [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261496244|ref|ZP_05992649.1| SMF family Rossmann fold nucleotide-binding protein [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261308075|gb|EEY09373.1| SMF family Rossmann fold nucleotide-binding protein [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261312420|gb|EEY13546.1| SMF family Rossmann fold nucleotide-binding protein [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 381
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP ++ L E+I ++GG +SE
Sbjct: 168 LGSGLNRIYPARHQKLAEQIVESGGALVSE 197
>gi|332557608|ref|ZP_08411930.1| hypothetical protein RSWS8N_01115 [Rhodobacter sphaeroides WS8N]
gi|332275320|gb|EGJ20635.1| hypothetical protein RSWS8N_01115 [Rhodobacter sphaeroides WS8N]
Length = 372
Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L EI G ISE P G
Sbjct: 177 AGGVDVIYPAENAGLAAEI-AARGCRISEQPMG 208
>gi|308235790|ref|ZP_07666527.1| DNA protecting protein DprA [Gardnerella vaginalis ATCC 14018]
gi|311114449|ref|YP_003985670.1| DNA protecting protein DprA [Gardnerella vaginalis ATCC 14019]
gi|310945943|gb|ADP38647.1| DNA protecting protein DprA [Gardnerella vaginalis ATCC 14019]
Length = 504
Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
AGGL+ + P N L + I +GG ISE+
Sbjct: 295 AGGLNKMGPSSNAQLFDAILSSGGACISEL 324
>gi|300087797|ref|YP_003758319.1| DNA protecting protein DprA [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527530|gb|ADJ25998.1| DNA protecting protein DprA [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 362
Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G+ +YP EN+ L +EI ++ G ISE P
Sbjct: 174 LGSGIGEIYPRENKKLADEITEH-GAVISEFPL 205
>gi|86137984|ref|ZP_01056560.1| DNA processing protein DprA, putative [Roseobacter sp. MED193]
gi|85825576|gb|EAQ45775.1| DNA processing protein DprA, putative [Roseobacter sp. MED193]
Length = 368
Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+AGG D +YP +N L ++I G+ +SE P
Sbjct: 117 LAGGCDVIYPSQNSALAQDI-AAKGLILSEQPM 148
>gi|326799926|ref|YP_004317745.1| DNA protecting protein DprA [Sphingobacterium sp. 21]
gi|326550690|gb|ADZ79075.1| DNA protecting protein DprA [Sphingobacterium sp. 21]
Length = 364
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD +YP NR L ++ NGG+ ++E P G
Sbjct: 171 LGHGLDRIYPAINRTLATDMLKNGGL-LTEYPSG 203
>gi|154174599|ref|YP_001408002.1| DNA protecting protein DprA [Campylobacter curvus 525.92]
gi|112803316|gb|EAU00660.1| DNA protecting protein DprA [Campylobacter curvus 525.92]
Length = 257
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
A GLD +YPP N ++EI++N +A+SE G
Sbjct: 92 ASGLDIIYPPSNAKFIKEIYENS-LALSEYENG 123
>gi|167040338|ref|YP_001663323.1| DNA protecting protein DprA [Thermoanaerobacter sp. X514]
gi|300914422|ref|ZP_07131738.1| DNA protecting protein DprA [Thermoanaerobacter sp. X561]
gi|307724342|ref|YP_003904093.1| DNA protecting protein DprA [Thermoanaerobacter sp. X513]
gi|166854578|gb|ABY92987.1| DNA protecting protein DprA [Thermoanaerobacter sp. X514]
gi|300889357|gb|EFK84503.1| DNA protecting protein DprA [Thermoanaerobacter sp. X561]
gi|307581403|gb|ADN54802.1| DNA protecting protein DprA [Thermoanaerobacter sp. X513]
Length = 362
Score = 34.0 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEKGLLVSEFPL 202
>gi|33867059|ref|NP_898617.1| putative DNA uptake protein [Rhodococcus erythropolis]
gi|33668893|gb|AAP73887.1| putative DNA uptake protein [Rhodococcus erythropolis]
Length = 307
Score = 34.0 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
A +D +P + + +I ++GG+ +SE P
Sbjct: 189 AASIDRAHPATHERMFRDISEHGGLVVSEYPP 220
>gi|295107976|emb|CBL21929.1| DNA protecting protein DprA [Ruminococcus obeum A2-162]
Length = 295
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D YP NR L + I GG ISE G
Sbjct: 104 LGNGPDICYPAGNRGLYQRILRTGGGIISEQTPG 137
>gi|183601407|ref|ZP_02962777.1| hypothetical protein BIFLAC_02087 [Bifidobacterium animalis subsp.
lactis HN019]
gi|241191093|ref|YP_002968487.1| hypothetical protein Balac_1067 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196499|ref|YP_002970054.1| hypothetical protein Balat_1067 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183219013|gb|EDT89654.1| hypothetical protein BIFLAC_02087 [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249485|gb|ACS46425.1| hypothetical protein Balac_1067 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251053|gb|ACS47992.1| hypothetical protein Balat_1067 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178837|gb|ADC86083.1| Smf protein [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794082|gb|ADG33617.1| hypothetical protein BalV_1029 [Bifidobacterium animalis subsp.
lactis V9]
Length = 381
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
AGGLD P N L E+I G +SE
Sbjct: 255 AGGLDHCGPTTNMRLFEQICAQHGALVSE 283
>gi|77462726|ref|YP_352230.1| hypothetical protein RSP_2177 [Rhodobacter sphaeroides 2.4.1]
gi|77387144|gb|ABA78329.1| hypothetical protein RSP_2177 [Rhodobacter sphaeroides 2.4.1]
Length = 372
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L EI G ISE P G
Sbjct: 177 AGGVDVIYPAENAGLAAEI-AARGCRISEQPMG 208
>gi|126461618|ref|YP_001042732.1| DNA protecting protein DprA [Rhodobacter sphaeroides ATCC 17029]
gi|126103282|gb|ABN75960.1| DNA protecting protein DprA [Rhodobacter sphaeroides ATCC 17029]
Length = 372
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L EI G ISE P G
Sbjct: 177 AGGVDVIYPAENAGLAAEI-AARGCRISEQPMG 208
>gi|328957577|ref|YP_004374963.1| DNA processing Smf single strand binding protein [Carnobacterium
sp. 17-4]
gi|328673901|gb|AEB29947.1| DNA processing Smf single strand binding protein [Carnobacterium
sp. 17-4]
Length = 289
Score = 34.0 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD YP EN +L EI N + ISE P G
Sbjct: 175 GLDHYYPFENESLQREIAKNH-LLISEYPLG 204
>gi|223041758|ref|ZP_03611951.1| protein smf (DNA-processing chain A) [Actinobacillus minor 202]
gi|223017442|gb|EEF15860.1| protein smf (DNA-processing chain A) [Actinobacillus minor 202]
Length = 382
Score = 34.0 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL +YP ++ L E+I + GG +SE
Sbjct: 169 LGSGLAQIYPARHKKLAEQIIEKGGALVSE 198
>gi|326389491|ref|ZP_08211058.1| DNA protecting protein DprA [Thermoanaerobacter ethanolicus JW 200]
gi|325994496|gb|EGD52921.1| DNA protecting protein DprA [Thermoanaerobacter ethanolicus JW 200]
Length = 362
Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEEGLLVSEFPL 202
>gi|307264857|ref|ZP_07546419.1| DNA protecting protein DprA [Thermoanaerobacter wiegelii Rt8.B1]
gi|306920115|gb|EFN50327.1| DNA protecting protein DprA [Thermoanaerobacter wiegelii Rt8.B1]
Length = 362
Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEEGLLVSEFPL 202
>gi|302386227|ref|YP_003822049.1| DNA protecting protein DprA [Clostridium saccharolyticum WM1]
gi|302196855|gb|ADL04426.1| DNA protecting protein DprA [Clostridium saccharolyticum WM1]
Length = 366
Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G++ YP EN L + + D GGI +P
Sbjct: 176 LGCGINLCYPKENFGLYQRMVDQGGIITEFLP 207
>gi|119503588|ref|ZP_01625671.1| SMF protein [marine gamma proteobacterium HTCC2080]
gi|119460650|gb|EAW41742.1| SMF protein [marine gamma proteobacterium HTCC2080]
Length = 380
Score = 34.0 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MA G+D +YP E+ L EE+ G +SE G
Sbjct: 177 MATGMDRIYPSEHYRLAEEVAAQ-GALLSEFCPG 209
>gi|317125405|ref|YP_004099517.1| DNA protecting protein DprA [Intrasporangium calvum DSM 43043]
gi|315589493|gb|ADU48790.1| DNA protecting protein DprA [Intrasporangium calvum DSM 43043]
Length = 389
Score = 34.0 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+E I G +SE+ G
Sbjct: 166 LASGIDRPYPSGHARLIERI-AETGAVLSEVAPG 198
>gi|289450127|ref|YP_003475174.1| DNA protecting protein DprA [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184674|gb|ADC91099.1| DNA protecting protein DprA [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 416
Score = 34.0 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP +NR + E IW + + +SE P G
Sbjct: 218 LANGIDICYPRQNRPIYEAIWRSQ-VLVSEYPPG 250
>gi|126737264|ref|ZP_01752999.1| DNA processing protein DprA, putative [Roseobacter sp. SK209-2-6]
gi|126721849|gb|EBA18552.1| DNA processing protein DprA, putative [Roseobacter sp. SK209-2-6]
Length = 423
Score = 34.0 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
MAGG D +YP EN L EI G+ +SE P G
Sbjct: 180 MAGGCDRIYPTENTELGVEIATQ-GLRLSEQPMG 212
>gi|89902621|ref|YP_525092.1| DNA processing protein DprA [Rhodoferax ferrireducens T118]
gi|89347358|gb|ABD71561.1| DNA processing protein DprA, putative [Rhodoferax ferrireducens
T118]
Length = 409
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP + L I G+ ISE P G
Sbjct: 213 GLDRVYPKRHLALAHRI-AQNGLLISEYPLG 242
>gi|150390497|ref|YP_001320546.1| DNA protecting protein DprA [Alkaliphilus metalliredigens QYMF]
gi|149950359|gb|ABR48887.1| DNA protecting protein DprA [Alkaliphilus metalliredigens QYMF]
Length = 365
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GL+ YP N+ L +I ++ G +SE G
Sbjct: 173 LGCGLEQCYPASNQMLFNKIIESDGCILSEYAPG 206
>gi|262067114|ref|ZP_06026726.1| DNA processing chain A [Fusobacterium periodonticum ATCC 33693]
gi|291379169|gb|EFE86687.1| DNA processing chain A [Fusobacterium periodonticum ATCC 33693]
Length = 304
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 1 MAGGLD-CLYPPENRNLLEEIWDNGGIAISEI 31
+ GLD +YP EN L E+I +N G +SE+
Sbjct: 183 LGQGLDLEVYPKENIKLAEKILENNGFLLSEL 214
>gi|219683464|ref|YP_002469847.1| DNA protecting protein DprA [Bifidobacterium animalis subsp. lactis
AD011]
gi|219621114|gb|ACL29271.1| DNA protecting protein DprA [Bifidobacterium animalis subsp. lactis
AD011]
Length = 361
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISE 30
AGGLD P N L E+I G +SE
Sbjct: 235 AGGLDHCGPTTNMRLFEQICAQHGALVSE 263
>gi|153854395|ref|ZP_01995673.1| hypothetical protein DORLON_01668 [Dorea longicatena DSM 13814]
gi|149752921|gb|EDM62852.1| hypothetical protein DORLON_01668 [Dorea longicatena DSM 13814]
Length = 238
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G+D YP EN L +I + GG +SE G
Sbjct: 48 LGCGVDVCYPRENIGLYMDIQEKGG-IVSEFSPG 80
>gi|167037677|ref|YP_001665255.1| DNA protecting protein DprA [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116092|ref|YP_004186251.1| DNA protecting protein DprA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856511|gb|ABY94919.1| DNA protecting protein DprA [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929183|gb|ADV79868.1| DNA protecting protein DprA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 362
Score = 34.0 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ G++ +YP EN+ L+E+I G+ +SE P
Sbjct: 171 LGNGINIVYPRENKKLMEQI-SEEGLLVSEFPL 202
>gi|325067042|ref|ZP_08125715.1| DNA protecting protein DprA [Actinomyces oris K20]
Length = 459
Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D LYP N +LE + + G ++E+P G
Sbjct: 253 AGGVDRLYPAGNTGVLEAVIAS-GALVAEVPPG 284
>gi|114462408|gb|ABI75144.1| SMF protein [Anabaena circinalis AWQC131C]
Length = 310
Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
M G+D +YP +NR+L ++I GI ISE P
Sbjct: 115 MGTGVDVIYPHKNRDLYQQIL-KSGIVISEYP 145
>gi|149375616|ref|ZP_01893385.1| probable smf protein [Marinobacter algicola DG893]
gi|149360018|gb|EDM48473.1| probable smf protein [Marinobacter algicola DG893]
Length = 388
Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D YP +R L E I G+ +SE P G
Sbjct: 195 GVDKPYPYRHRTLSERI-AGEGVIVSEYPPG 224
>gi|149174899|ref|ZP_01853523.1| DNA processing chain A [Planctomyces maris DSM 8797]
gi|148846236|gb|EDL60575.1| DNA processing chain A [Planctomyces maris DSM 8797]
Length = 376
Score = 33.6 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
MA GL +YPPE+R L E G ++E P
Sbjct: 180 MATGLAHIYPPEHREL-SEAVALQGAIVTEFPL 211
>gi|311109269|ref|YP_003982122.1| DNA protecting protein DprA [Achromobacter xylosoxidans A8]
gi|310763958|gb|ADP19407.1| DNA protecting protein DprA [Achromobacter xylosoxidans A8]
Length = 370
Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M G+D +YP ++R+L I + G +SE+P G
Sbjct: 182 MGTGIDRIYPAKHRDLAHRIAAH-GALVSELPLG 214
>gi|4100626|gb|AAD00901.1| FIR2 [Rhodococcus fascians]
Length = 293
Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
M GLD YP + LLE + + G+ +SE FG
Sbjct: 174 MPCGLDRAYPSGHARLLERVAEQ-GVVVSEYSFG 206
>gi|251788005|ref|YP_003002726.1| DNA protecting protein DprA [Dickeya zeae Ech1591]
gi|247536626|gb|ACT05247.1| DNA protecting protein DprA [Dickeya zeae Ech1591]
Length = 377
Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ++ L + I GG +SE P
Sbjct: 167 LGSGLNQLYPRRHQALADAIVAKGGALVSEFPL 199
>gi|241766762|ref|ZP_04764592.1| DNA protecting protein DprA [Acidovorax delafieldii 2AN]
gi|241362868|gb|EER58607.1| DNA protecting protein DprA [Acidovorax delafieldii 2AN]
Length = 390
Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
GLD +YP +N L I G+ +SE P G
Sbjct: 195 GLDRVYPRQNLGLARRIAAQ-GLLVSEYPLG 224
>gi|15837526|ref|NP_298214.1| DNA processing chain A [Xylella fastidiosa 9a5c]
gi|9105845|gb|AAF83734.1|AE003931_11 DNA processing chain A [Xylella fastidiosa 9a5c]
Length = 387
Score = 33.6 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ G D YP ++ L I + G ISE P G
Sbjct: 184 LGTGPDVPYPARHKKLYARITTD-GAVISEYPPG 216
>gi|270264339|ref|ZP_06192605.1| DNA protecting protein DprA [Serratia odorifera 4Rx13]
gi|270041475|gb|EFA14573.1| DNA protecting protein DprA [Serratia odorifera 4Rx13]
Length = 373
Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GL +YP +R L E+I ++GG ISE
Sbjct: 167 LGSGLANIYPRRHRRLAEQIVEHGGAVISEY 197
>gi|186682634|ref|YP_001865830.1| DNA protecting protein DprA [Nostoc punctiforme PCC 73102]
gi|186465086|gb|ACC80887.1| DNA protecting protein DprA [Nostoc punctiforme PCC 73102]
Length = 371
Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIP 32
+ G+D +YP +NR+L ++I G+ +SE P
Sbjct: 177 LGTGVDVIYPHKNRDLYKQILT-AGLVVSEYP 207
>gi|160872061|ref|ZP_02062193.1| protein smf (DNA-processing chain A) [Rickettsiella grylli]
gi|159120860|gb|EDP46198.1| protein smf (DNA-processing chain A) [Rickettsiella grylli]
Length = 384
Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ G++C+YP +R L EI + GG+ ISE
Sbjct: 174 LGSGIECIYPSCHRALANEIVEKGGLLISE 203
>gi|332289297|ref|YP_004420149.1| DNA protecting protein DprA [Gallibacterium anatis UMN179]
gi|330432193|gb|AEC17252.1| DNA protecting protein DprA [Gallibacterium anatis UMN179]
Length = 398
Score = 33.6 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ GL+ LYP ++ L ++I +N G +SE+
Sbjct: 169 LGSGLNELYPARHKKLAQQILENNGALLSEL 199
>gi|291454421|ref|ZP_06593811.1| DNA processing Smf-family protein [Streptomyces albus J1074]
gi|291357370|gb|EFE84272.1| DNA processing Smf-family protein [Streptomyces albus J1074]
Length = 402
Score = 33.6 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I + G+ +SE+P G
Sbjct: 185 LACGVDSPYPRGHAQLITRIAEQ-GLVVSELPPG 217
>gi|297717816|gb|ADI50051.1| putative DNA processing protein DprA [Candidatus Odyssella
thessalonicensis L13]
Length = 361
Score = 33.6 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 8 LYPPENRNLLEEIWDNGGIAISEIPFG 34
+YPPE+ +L +I + G +SE+ G
Sbjct: 167 IYPPEHEDLYNDIQRH-GCIVSEMLIG 192
>gi|254488483|ref|ZP_05101688.1| DNA processing protein [Roseobacter sp. GAI101]
gi|214045352|gb|EEB85990.1| DNA processing protein [Roseobacter sp. GAI101]
Length = 347
Score = 33.6 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 2 AGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
AGG+D +YP EN L +I G+ +SE P G
Sbjct: 147 AGGVDVMYPAENTQLAADI-AASGLRLSEQPMG 178
>gi|158320506|ref|YP_001513013.1| DNA protecting protein DprA [Alkaliphilus oremlandii OhILAs]
gi|158140705|gb|ABW19017.1| DNA protecting protein DprA [Alkaliphilus oremlandii OhILAs]
Length = 365
Score = 33.6 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+ GLD YP N L+ + +N G +SE P G
Sbjct: 174 LGCGLDQCYPASNERLMSTMIEN-GCVLSEYPLG 206
>gi|15895060|ref|NP_348409.1| DNA uptake protein [Clostridium acetobutylicum ATCC 824]
gi|15024755|gb|AAK79749.1|AE007687_6 DNA uptake protein [Clostridium acetobutylicum ATCC 824]
gi|325509198|gb|ADZ20834.1| DNA uptake protein [Clostridium acetobutylicum EA 2018]
Length = 354
Score = 33.6 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEI 31
+ G D +YP EN+NL +I N G IS+
Sbjct: 160 LGCGADVIYPKENKNLYCQIIRN-GCIISQY 189
>gi|300865695|ref|ZP_07110461.1| DNA processing protein [Oscillatoria sp. PCC 6506]
gi|300336291|emb|CBN55611.1| DNA processing protein [Oscillatoria sp. PCC 6506]
Length = 369
Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 4 GLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
G+D +YP N+ L E + + G+AISE P G
Sbjct: 161 GVDIVYPAANKKLAERVLEQ-GLAISEYPAG 190
>gi|167031106|ref|YP_001666337.1| DNA protecting protein DprA [Pseudomonas putida GB-1]
gi|166857594|gb|ABY96001.1| DNA protecting protein DprA [Pseudomonas putida GB-1]
Length = 365
Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL LYP + L + + DNG +SE P
Sbjct: 181 LGTGLQKLYPQRHHELAQAMIDNGSALVSEYPL 213
>gi|290957087|ref|YP_003488269.1| DNA mediated transformation protein [Streptomyces scabiei 87.22]
gi|260646613|emb|CBG69710.1| putative DNA mediated transformation protein [Streptomyces scabiei
87.22]
Length = 390
Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPFG 34
+A G+D YP + L+ I + G+ + E+P G
Sbjct: 185 LACGVDRPYPRGHAQLISRIAEQ-GLVVGELPPG 217
>gi|330957383|gb|EGH57643.1| DNA processing protein DprA [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 371
Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISEIPF 33
+ GL+ LYP ++R L ++ + GG ISE P
Sbjct: 181 LGTGLEKLYPQQHRALAAQMAEQGGAVISEFPL 213
>gi|145638193|ref|ZP_01793803.1| 2-isopropylmalate synthase [Haemophilus influenzae PittII]
gi|145272522|gb|EDK12429.1| 2-isopropylmalate synthase [Haemophilus influenzae PittII]
gi|309751349|gb|ADO81333.1| DNA processing chain A [Haemophilus influenzae R2866]
Length = 373
Score = 33.6 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 1 MAGGLDCLYPPENRNLLEEIWDNGGIAISE 30
+ GL+ +YP +++ L +I +N G +SE
Sbjct: 170 LGSGLEQIYPSKHQRLSAQIIENNGALVSE 199
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.318 0.163 0.542
Lambda K H
0.267 0.0497 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 884,089,377
Number of Sequences: 14124377
Number of extensions: 19906616
Number of successful extensions: 53872
Number of sequences better than 10.0: 1053
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 569
Number of HSP's that attempted gapping in prelim test: 52859
Number of HSP's gapped (non-prelim): 1325
length of query: 34
length of database: 4,842,793,630
effective HSP length: 8
effective length of query: 26
effective length of database: 4,729,798,614
effective search space: 122974763964
effective search space used: 122974763964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 76 (33.6 bits)