HHsearch alignment for GI: 254780305 and conserved domain: COG4742
>COG4742 Predicted transcriptional regulator [Transcription].
Probab=95.42 E-value=0.029 Score=32.53 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 989999999858898899999998299999999999999994179864798689813
Q gi|254780305|r 33 QCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSLTM 89 (95)
Q Consensus 33 ~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v~l~~ 89 (95)
T Consensus 12 SekRk~lLllL~egPkti~EI~~~l~vs~~ai~pqiKkL~~~~LV~~~-~~~Y~LS~ 67 (260)
T COG4742 12 SEKRKDLLLLLKEGPKTIEEIKNELNVSSSAILPQIKKLKDKGLVVQE-GDRYSLSS 67 (260)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEC-CCEEEECC
T ss_conf 388999999998589889999988589938889999987138987851-99987340