HHsearch alignment for GI: 254780305 and conserved domain: PRK10163
>PRK10163 DNA-binding transcriptional repressor AllR; Provisional.
Probab=96.23 E-value=0.013 Score=34.46 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=48.2
Q ss_pred CHHHH-HHHHHHC--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC-CEEEEE
Q ss_conf 98999-9999858--89889999999829999999999999999417986479-868981
Q gi|254780305|r 33 QCERV-RIKQSLN--NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPE-GKVSLT 88 (95)
Q Consensus 33 ~~~~~-~Il~~L~--~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pG-g~v~l~ 88 (95)
T Consensus 23 sl~Ral~IL~~la~~~~~ltl~eia~~lglpksT~~RlL~tL~~~G~v~~d~~~~~Y~lG 82 (271)
T PRK10163 23 ALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIG 82 (271)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEECC
T ss_conf 999999999999747999799999999791999999999999968988984899917647