HHsearch alignment for GI: 254780305 and conserved domain: PRK11512
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional.
Probab=94.57 E-value=0.051 Score=31.18 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=52.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 4356887999899999998588-9889999999829999999999999999417986479
Q gi|254780305|r 24 NITHYPEYTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPE 82 (95)
Q Consensus 24 ~~~~~p~~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pG 82 (95)
T Consensus 30 ~~~L~~~gLt~~Q~~vL~~L~~~~~~t~~eLa~~l~id~~tvt~~ldrLe~~GlI~R~~~ 89 (144)
T PRK11512 30 NEYLSPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPN 89 (144)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
T ss_conf 998754599999999999999869979999999978888789999999997879663579