HHsearch alignment for GI: 254780305 and conserved domain: pfam01978
>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.
Probab=95.92 E-value=0.017 Score=33.69 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 998999999985-8898899999998299999999999999994179864798689
Q gi|254780305|r 32 TQCERVRIKQSL-NNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVS 86 (95)
Q Consensus 32 ~~~~~~~Il~~L-~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v~ 86 (95)
T Consensus 6 ls~~E~~vY~~Ll~~g~~t~~eia~~~~i~r~~vY~~L~~L~~kGlv~~~~~~p~~ 61 (68)
T pfam01978 6 LSEYEAKVYLALLKLGPATADEIAEESGVPRSKVYEVLRSLEKKGLVEREKGRPKK 61 (68)
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCE
T ss_conf 89999999999998199889999999598898999999999988988986797447