HHsearch alignment for GI: 254780305 and conserved domain: pfam08784
>pfam08784 RPA_C Replication protein A C terminal. This domain corresponds to the C terminal of the single stranded DNA binding protein RPA (replication protein A). RPA is involved in many DNA metabolic pathways including DNA replication, DNA repair, recombination, cell cycle and DNA damage checkpoints.
Probab=93.89 E-value=0.28 Score=27.21 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHCC-----CCCCHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Q ss_conf 999899999998588-----988999999982-99999999999999994179
Q gi|254780305|r 31 YTQCERVRIKQSLNN-----VPIHIDDIIHHT-GIEAPVVYLVLLELDLAGRL 77 (95)
Q Consensus 31 ~~~~~~~~Il~~L~~-----~p~~iD~l~~~t-gl~~~~v~~~LleLEL~G~i 77 (95)
T Consensus 44 ~ls~~~~~V~~~i~~~~~~~eG~h~~~l~~~l~~~~~~~i~~a~d~L~~eG~I 96 (103)
T pfam08784 44 GLTPLQDQVLNLIKQSCPGEEGVHVDELAAQLNGLPVNDIRQAVDFLSNEGHI 96 (103)
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEE
T ss_conf 87899999999999548898872799999998299999999999999848806