HHsearch alignment of GI: 254780305 and MMDB domain: 1ku9_A_1-88
>1ku9_A (A:1-88) Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii}
Probab=91.80 E-value=0.2 Score=27.64 Aligned_cols=55 Identities=18% Similarity=0.017 Sum_probs=47.9
Q ss_pred CCCCCHHHHHHHHHHCC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 87999899999998588--98899999998299999999999999994179864798
Q gi|254780305|r 29 PEYTQCERVRIKQSLNN--VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG 83 (95)
Q Consensus 29 p~~~~~~~~~Il~~L~~--~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg 83 (95)
+...+..+-.||..|.. +++.+-+|++.++++.+.++.++-.||=+|+|.+.++.
T Consensus 21 ~~gls~~q~~vL~~l~~~~g~~t~~~La~~~~~~~~~vs~~i~~Le~~G~I~r~~~~ 77 (88)
T 1ku9_A 21 IHGLNKSVGAVYAILYLSDKPLTISDIXEELKISKGNVSXSLKKLEELGFVRKVWIK 77 (88)
T ss_dssp HTTCCHHHHHHHHHHHHCSSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCT
T ss_pred HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 819799999999999976989699999978486651499999999988998985289