HHsearch alignment of GI: 254780305 and MMDB domain: 2htj_A_

>2htj_A (A:) P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli}

Probab=94.41  E-value=0.037  Score=31.60  Aligned_cols=48  Identities=21%  Similarity=0.154  Sum_probs=44.2

Q ss_pred             HHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             999998588-988999999982999999999999999941798647986
Q gi|254780305|r   37 VRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGK   84 (95)
Q Consensus        37 ~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~   84 (95)
                      ..|++.+.. .|..--+|+.++|+++=++--.|+.||=.|+|++.|.++
T Consensus         3 ~~Ilef~~e~n~~~TRdIAd~~~lSIYqAR~yLlkLekeG~V~~~p~~~   51 (81)
T 2htj_A            3 NEILEFLNRHNGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRR   51 (81)
T ss_dssp             HHHHHHHHHSCCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEECCSS
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHC
T ss_conf             3899998624896288999996528999999999986706701584540