HHsearch alignment of GI: 254780305 and MMDB domain: 2ia0_A_1-66
>2ia0_A (A:1-66) Putative HTH-type transcriptional regulator PF0864; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=94.96 E-value=0.037 Score=31.58 Aligned_cols=53 Identities=9% Similarity=0.035 Sum_probs=45.2
Q ss_pred CCCCCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 887999899999998588-98899999998299999999999999994179864
Q gi|254780305|r 28 YPEYTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHH 80 (95)
Q Consensus 28 ~p~~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~ 80 (95)
.....+.-..+|+..|.. ..++..+|++.+|++.++|...+=.||=+|+|++.
T Consensus 11 ~~~~ld~~D~~IL~~L~~~~r~s~~ela~~lgls~~tv~~ri~~L~~~GvI~~y 64 (66)
T 2ia0_A 11 SEIHLDDLDRNILRLLKKDARLTISELSEQLKKPESTIHFRIKKLQERGVIERY 64 (66)
T ss_dssp ---CCCHHHHHHHHHHHHCTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 647638999999999998489999999999890999999999999844624899