HHsearch results for GI: 254780305 and protein with PDBid: 1mkm_A

>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2

Probab=96.98  E-value=0.00085  Score=39.60  Aligned_cols=52  Identities=10%  Similarity=0.146  Sum_probs=47.9

Q ss_pred             HHHHHHC--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             9999858--898899999998299999999999999994179864798689813
Q gi|254780305|r   38 RIKQSLN--NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSLTM   89 (95)
Q Consensus        38 ~Il~~L~--~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v~l~~   89 (95)
                      .||++++  ..|..+.+|++++|+|.++++.+|-.|+-.|+|.+.++|+|++..
T Consensus        12 ~IL~~~a~~~~~~tl~eia~~lglpksT~~Rll~tL~~~G~l~~~~~~~Y~lG~   65 (249)
T 1mkm_A           12 EILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGY   65 (249)
T ss_dssp             HHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECTTSCEEECT
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHH
T ss_conf             999999738999899999998791999999999999977986532553201324