HHsearch results for GI: 254780305 and protein with PDBid: 2nyx_A

>2nyx_A Probable transcriptional regulatory protein, RV1404; alpha/beta, structural genomics, PSI-2, protein structure initiative; 2.30A {Mycobacterium tuberculosis H37RV}
Probab=92.05  E-value=0.081  Score=28.93  Aligned_cols=53  Identities=17%  Similarity=0.144  Sum_probs=47.3

Q ss_pred             CCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             999899999998588-98899999998299999999999999994179864798
Q gi|254780305|r   31 YTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG   83 (95)
Q Consensus        31 ~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg   83 (95)
                      ..+..+-.||..|.. .++.+.+|++..|++.+.++.++-.||=+|+|.+.++.
T Consensus        42 ~LT~~q~~vL~~l~~~~~~~~~eLa~~l~i~~~~vs~~l~~Le~~GlV~r~~~~   95 (168)
T 2nyx_A           42 NITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHP   95 (168)
T ss_dssp             SCCHHHHHHHHHHHHHCSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECS
T ss_pred             CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             989999999999996799699999999896988999999998164427865337