HHsearch results for GI: 254780305 and protein with PDBid: 3cuo_A
>3cuo_A Uncharacterized HTH-type transcriptional regulator YGAV; DNA-binding transcriptional regulator, structural genomics, PSI, MCSG; 2.00A {Escherichia coli K12}
Probab=95.05 E-value=0.024 Score=31.77 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHCCC-CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE---EEEE
Q ss_conf 998999999985889-88999999982999999999999999941798647986---8981
Q gi|254780305|r 32 TQCERVRIKQSLNNV-PIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGK---VSLT 88 (95)
Q Consensus 32 ~~~~~~~Il~~L~~~-p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~---v~l~ 88 (95)
.++.+.+|+..|... +..+.+|++.+|++.+.++-.|-.|+=+|+|....-|+ |++.
T Consensus 22 ~~p~Rl~Il~~L~~~~~~~v~eLa~~l~~s~stvS~HL~~L~~aglV~~~r~G~~~~Y~l~ 82 (99)
T 3cuo_A 22 SHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIK 82 (99)
T ss_dssp CSHHHHHHHHHHTTCCSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSCEEEEEC
T ss_pred CCHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEEC
T ss_conf 7999999999985899907999774558598799999999998894169988899999989