HHsearch results for GI: 254780305 and protein with PDBid: 3maj_A
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=99.42 E-value=1.1e-13 Score=92.97 Aligned_cols=62 Identities=44% Similarity=0.569 Sum_probs=57.2
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 68879998999999985889889999999829999999999999999417986479868981
Q gi|254780305|r 27 HYPEYTQCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSLT 88 (95)
Q Consensus 27 ~~p~~~~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v~l~ 88 (95)
....+.+.++++|+++|+.+|+++|+|+.++|+++++++++|++|||+|+|+++|||+|+|+
T Consensus 321 ~~~~~~~~~~~~il~~l~~~~~~~d~l~~~~gl~~~~~~~~L~~LEl~G~v~~~~G~~y~l~ 382 (382)
T 3maj_A 321 PEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSLS 382 (382)
T ss_dssp --CCCCTTHHHHHHHHCCSSCEEHHHHHHHHCCCHHHHHHHHHHHHHTTCCEECTTSEEEC-
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCEEEEC
T ss_conf 77798986899999866999988999999989099999999999997596773499179829