HHsearch results for GI: 254780305 and protein with PDBid: 3nqo_A

>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=90.74  E-value=0.24  Score=26.33  Aligned_cols=52  Identities=12%  Similarity=0.137  Sum_probs=45.2

Q ss_pred             CCCHHHHHHHHHHC---CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99989999999858---89889999999829999999999999999417986479
Q gi|254780305|r   31 YTQCERVRIKQSLN---NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPE   82 (95)
Q Consensus        31 ~~~~~~~~Il~~L~---~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pG   82 (95)
                      ..+..+-.|+..|.   ..++.+-+|++..|++.+.|+.++-.||=+|+|.+.+.
T Consensus        38 ~Lt~~q~~vL~~l~~~~~~~~t~~eLa~~l~i~~stvs~~v~~Le~~glI~r~~~   92 (189)
T 3nqo_A           38 ILTSRQYMTILSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPS   92 (189)
T ss_dssp             SSCHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             9999999999999847899909999999989688699999999998798637432