HHSEARCH alignment of GI: 254780305 and SCOP domain: d1jgsa_

Alignment

Probab=91.57  E-value=0.1  Score=27.06  Aligned_cols=57  Identities=12%  Similarity=0.074  Sum_probs=48.8

Q ss_pred             CCCCCCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             6887999899999998588-98899999998299999999999999994179864798
Q gi|254780305|r   27 HYPEYTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG   83 (95)
Q Consensus        27 ~~p~~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg   83 (95)
                      ..+-..+..+-.++..|+. .++...+|+..++++.+.++.++-.||=+|+|.+.+..
T Consensus        27 l~~~~Lt~~q~~vL~~l~~~~~~t~~ela~~~~i~~~~vs~~v~~L~~~glv~r~~~~   84 (138)
T d1jgsa_          27 LSPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNP   84 (138)
T ss_dssp             HTTTTSCHHHHHHHHHHHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECT
T ss_pred             HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             8786989999999886871809899999999787885799999987307877986316

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: MarR-like transcriptional regulators
domain: Multiple antibiotic resistance repressor, MarR
species: Escherichia coli [TaxId: 562]