HHSEARCH alignment of GI: 254780305 and SCOP domain: d1ulya_

Alignment

Probab=96.19  E-value=0.0043  Score=34.52  Aligned_cols=47  Identities=21%  Similarity=0.246  Sum_probs=44.1

Q ss_pred             CHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             98999999985889889999999829999999999999999417986
Q gi|254780305|r   33 QCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCH   79 (95)
Q Consensus        33 ~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~   79 (95)
                      ++-+.+||..|...|.++.+|+..+|++.+.++..|-.|+=+|.|..
T Consensus        18 ~p~R~~Il~~L~~~~~s~~ela~~lg~s~~~v~~hl~~L~~~glv~~   64 (190)
T d1ulya_          18 EDTRRKILKLLRNKEMTISQLSEILGKTPQTIYHHIEKLKEAGLVEV   64 (190)
T ss_dssp             SHHHHHHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred             CHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
T ss_conf             99999999999819987999999989199999999999998898389

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Hypothetical protein PH1932
domain: Hypothetical protein PH1932
species: Pyrococcus horikoshii [TaxId: 53953]