HHSEARCH alignment of GI: 254780305 and SCOP domain: d2d1ha1

Alignment
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=95.37  E-value=0.0059  Score=33.80  Aligned_cols=53  Identities=13%  Similarity=0.073  Sum_probs=45.3

Q ss_pred             CCCHHHHHHHHHHC--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99989999999858--898899999998299999999999999994179864798
Q gi|254780305|r   31 YTQCERVRIKQSLN--NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG   83 (95)
Q Consensus        31 ~~~~~~~~Il~~L~--~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg   83 (95)
                      ..+..+..||..|.  .+|+.+++|++++|++.+.|+..|-.||=+|+|.+.+..
T Consensus        18 gLs~~~~~iL~~L~~~~~~~t~~eLa~~~~i~~~tvs~~l~~L~~~GlV~r~~~~   72 (109)
T d2d1ha1          18 KITDTDVAVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTE   72 (109)
T ss_dssp             TCCHHHHHHHHHHHHHCSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-
T ss_pred             CCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             9599999999999976989889999999885676999999999978997985268


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: TrmB-like
domain: Hypothetical transcriptional regulator ST1889
species: Sulfolobus tokodaii [TaxId: 111955]