HHSEARCH alignment of GI: 254780305 and SCOP domain: d2hzta1

Alignment

Probab=90.78  E-value=0.11  Score=26.99  Aligned_cols=45  Identities=16%  Similarity=0.104  Sum_probs=40.7

Q ss_pred             HHHHHHHCCCCCCHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999998588988999999982-999999999999999941798647
Q gi|254780305|r   37 VRIKQSLNNVPIHIDDIIHHT-GIEAPVVYLVLLELDLAGRLCHHP   81 (95)
Q Consensus        37 ~~Il~~L~~~p~~iD~l~~~t-gl~~~~v~~~LleLEL~G~i~~~p   81 (95)
                      -.|+..|...+..+++|.+.. |++...++.-|-+||-.|.|.|..
T Consensus        14 l~Il~~L~~g~~rF~el~~~l~gis~~~Ls~rLk~Le~~glv~r~~   59 (95)
T d2hzta1          14 CVILCHLTHGKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIV   59 (95)
T ss_dssp             HHHHHHHTTCCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEE
T ss_conf             9999999749997999997732677658999999999968773000

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: HxlR-like
domain: Putative transcriptional regulator YtcD
species: Bacillus subtilis [TaxId: 1423]