HHSEARCH alignment of GI: 254780305 and SCOP domain: d3broa1

Alignment
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=90.92  E-value=0.15  Score=26.13  Aligned_cols=54  Identities=13%  Similarity=0.161  Sum_probs=46.0

Q ss_pred             CCCCHHHHHHHHHHCC---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             7999899999998588---98899999998299999999999999994179864798
Q gi|254780305|r   30 EYTQCERVRIKQSLNN---VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG   83 (95)
Q Consensus        30 ~~~~~~~~~Il~~L~~---~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg   83 (95)
                      -..+..+-.||..|..   .+++..+|++.++++.+.++.++-.||=+|+|.+....
T Consensus        25 ~glt~~q~~vL~~l~~~~~~~it~~ela~~~~~~~~~vs~~l~~L~~~g~v~r~~~~   81 (135)
T d3broa1          25 YDLTGTQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSG   81 (135)
T ss_dssp             TTCCHHHHHHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECS
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             699999999999999707999999999999896886899999999888888888610


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: MarR-like transcriptional regulators
domain: Transcriptional regulator OEOE1854
species: Oenococcus oeni [TaxId: 1247]