HHsearch alignment for GI: 254780306 and conserved domain: COG0353

Probab=96.73  E-value=0.041  Score=34.89  Aligned_cols=86  Identities=27%  Similarity=0.435  Sum_probs=54.1

Q ss_pred             EEEECCHHHHHHHHHHH--CCCCEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCC--EEEEC
Q ss_conf             89977904787788750--899899994251100786557867666744068877654899999999987099--89994
Q gi|254780306|r    3 VIIVESPAKAKTISKYL--GSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKHLQNIIHAVKSST--ILILA   78 (837)
Q Consensus         3 LvIvEsP~kak~I~~~L--g~~y~V~as~GHirdLp~~~~~v~~~~~f~p~y~v~~~~kk~~~~i~~~~k~a~--~iilA   78 (837)
T Consensus        82 icVVe~p~Dv~a~E~~~~f~G~YhVL--~G~lspl----~gigpe~-------------l~i~~L~~Rl~~~~~~EvIlA  142 (198)
T COG0353          82 LCVVEEPKDVLALEKTGEFRGLYHVL--GGLLSPL----DGIGPED-------------LNIDELLQRLAEGSIKEVILA  142 (198)
T ss_pred             EEEECCHHHHHHHHHHCCCCEEEEEE--CCCCCCC----CCCCCCC-------------CCHHHHHHHHHCCCCCEEEEE
T ss_conf             89986649999999745257278884--5733734----5899101-------------267999999846997559996


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf             699702579999999997551257887169999
Q gi|254780306|r   79 TDPDREGEAISWHVLDVLRQKNLIEKTKIQRVS  111 (837)
Q Consensus        79 tD~DREGE~Iawhi~e~l~~~~~~~~~~v~R~~  111 (837)
T Consensus       143 tnpTvEGeaTA~YI~~~l~~~----~ikvtRlA  171 (198)
T COG0353         143 TNPTVEGEATALYIARLLKPL----GLKVTRLA  171 (198)
T ss_pred             CCCCCCCHHHHHHHHHHHHHC----CCEEEEEE
T ss_conf             589864368999999997535----97178776