HHsearch alignment for GI: 254780306 and conserved domain: COG0551

>COG0551 TopA Zn-finger domain associated with topoisomerase type I [DNA replication, recombination, and repair].

Probab=98.22  E-value=3.8e-06  Score=65.20  Aligned_cols=66  Identities=30%  Similarity=0.684  Sum_probs=47.0

Q ss_pred             CCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEEECCCC
Q ss_conf             567661143346777313687157761112343432333-210012210000123442014689999-66999826974
Q gi|254780306|r  597 ENNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKY-TRQLTSNPQDIPEMKESVLLGNDLETK-ESVTLRSGRFG  673 (837)
Q Consensus       597 ~~~~~~~~Cp~C~~g~L~~k~~gK~G~FigCSnyPeCk~-t~~l~~~~~~~~~~~~~~~LG~dP~~G-~~I~lk~GryG  673 (837)
T Consensus        12 ~~~~~~~~Cp~Cg~~m~~-~-~~~~g~f~gCs~yP~C~~~~~~---------~~~~~~~~~~Cp~C~~~~~~~k~~~~~   79 (140)
T COG0551          12 KDLKTGQICPKCGKNMVK-K-FGKYGIFLGCSNYPKCDYYEPE---------KAIAEKTGVKCPKCGKGLLVLKKGRFG   79 (140)
T ss_pred             ECCCCCCCCCCCCCCEEE-E-ECCCCEEEECCCCCCCCCCCCC---------CCCCCCCCEECCCCCCCCCEEEECCCC
T ss_conf             012357607777754057-8-5458779835888655667542---------332124776677667734023434567