HHsearch alignment for GI: 254780306 and conserved domain: COG1658

>COG1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].

Probab=93.88  E-value=0.17  Score=30.17  Aligned_cols=68  Identities=25%  Similarity=0.345  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHH-HCCCCCCCEEE--------EEEECCCHHHHHHHHHCC
Q ss_conf             8999999999870998999469970257999999999755-12578871699--------998037989999998622
Q gi|254780306|r   59 QKHLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQ-KNLIEKTKIQR--------VSFNAITKQVVLNAMKSP  127 (837)
Q Consensus        59 kk~~~~i~~~~k~a~~iilAtD~DREGE~Iawhi~e~l~~-~~~~~~~~v~R--------~~f~eiT~~aI~~A~~n~  127 (837)
T Consensus        43 ~~~ie~i~~~~~~-k~VIILTD~D~~Ge~Irk~l~~~l~~~~~~~id~~~~~~~~~~~~i~gVE~~~~~~~~~~l~~~  119 (127)
T COG1658          43 LETIELIKKAQKY-KGVIILTDPDRKGERIRKKLKEYLPGAKGAFIDREIRNKLKINGKIIGVEEASSEALRKALKEV  119 (127)
T ss_pred             HHHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCEECCHHHHHHHHHHC
T ss_conf             8899999986425-8779986898562899999999715254654148985130367552361107848899999746