HHsearch alignment for GI: 254780306 and conserved domain: COG4026
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only].
Probab=96.61 E-value=0.039 Score=35.06 Aligned_cols=80 Identities=31% Similarity=0.514 Sum_probs=58.1
Q ss_pred EEEECCHHHHHHHHHHH-----CCCCEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEE
Q ss_conf 89977904787788750-----8998999942511007865578676667440688776548999999999870998999
Q gi|254780306|r 3 VIIVESPAKAKTISKYL-----GSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKHLQNIIHAVKSSTILIL 77 (837)
Q Consensus 3 LvIvEsP~kak~I~~~L-----g~~y~V~as~GHirdLp~~~~~v~~~~~f~p~y~v~~~~kk~~~~i~~~~k~a~~iil 77 (837)
T Consensus 10 RIiVEGAsDvE~iSkalQr~aLG~eYnITis------------SIiPTT--------------~~eIA~raaeGADlvlI 63 (290)
T COG4026 10 RIIVEGASDVEVISKALQRLALGSEYNITIS------------SIIPTT--------------NVEIAKRAAEGADLVLI 63 (290)
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCEEEEE------------EECCCC--------------HHHHHHHHHCCCCEEEE
T ss_conf 9986065338999999988640561105888------------622675--------------19999876356877999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 46997025799999999975512578871699998
Q gi|254780306|r 78 ATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSF 112 (837)
Q Consensus 78 AtD~DREGE~Iawhi~e~l~~~~~~~~~~v~R~~f 112 (837)
T Consensus 64 ATDaD~~GReLA~kf~eeLrg~V----GhiERmK~ 94 (290)
T COG4026 64 ATDADRVGRELAEKFFEELRGMV----GHIERMKI 94 (290)
T ss_pred EECCCCHHHHHHHHHHHHHHHHH----HHHHEECC
T ss_conf 60576045999999999998753----04511226