HHsearch alignment for GI: 254780306 and conserved domain: COG4026

>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only].
Probab=96.61  E-value=0.039  Score=35.06  Aligned_cols=80  Identities=31%  Similarity=0.514  Sum_probs=58.1

Q ss_pred             EEEECCHHHHHHHHHHH-----CCCCEEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEE
Q ss_conf             89977904787788750-----8998999942511007865578676667440688776548999999999870998999
Q gi|254780306|r    3 VIIVESPAKAKTISKYL-----GSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKHLQNIIHAVKSSTILIL   77 (837)
Q Consensus         3 LvIvEsP~kak~I~~~L-----g~~y~V~as~GHirdLp~~~~~v~~~~~f~p~y~v~~~~kk~~~~i~~~~k~a~~iil   77 (837)
T Consensus        10 RIiVEGAsDvE~iSkalQr~aLG~eYnITis------------SIiPTT--------------~~eIA~raaeGADlvlI   63 (290)
T COG4026          10 RIIVEGASDVEVISKALQRLALGSEYNITIS------------SIIPTT--------------NVEIAKRAAEGADLVLI   63 (290)
T ss_pred             EEEEECCCHHHHHHHHHHHHHHCCCCEEEEE------------EECCCC--------------HHHHHHHHHCCCCEEEE
T ss_conf             9986065338999999988640561105888------------622675--------------19999876356877999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             46997025799999999975512578871699998
Q gi|254780306|r   78 ATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSF  112 (837)
Q Consensus        78 AtD~DREGE~Iawhi~e~l~~~~~~~~~~v~R~~f  112 (837)
T Consensus        64 ATDaD~~GReLA~kf~eeLrg~V----GhiERmK~   94 (290)
T COG4026          64 ATDADRVGRELAEKFFEELRGMV----GHIERMKI   94 (290)
T ss_pred             EECCCCHHHHHHHHHHHHHHHHH----HHHHEECC
T ss_conf             60576045999999999998753----04511226