HHsearch alignment for GI: 254780306 and conserved domain: PRK07726

>PRK07726 DNA topoisomerase III; Provisional.
Probab=90.90  E-value=0.81  Score=25.18  Aligned_cols=117  Identities=15%  Similarity=0.106  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHHHH-HHHHEECCCEEEEEEEECCCEEEEEEEEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
Q ss_conf             999999999999985-2221100100136774079639999987488058856763267776321001014886456882
Q gi|254780306|r  374 FQLYNLIWKRSVASQ-MASAKFERTTVNIIATYNDQIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQ  452 (837)
Q Consensus       374 ~klY~LI~~R~lasq-m~~a~~~~~~v~i~~~~~~~~~~F~asg~~i~~~G~~~vy~~~~~~~~~~~~~~~LP~l~~g~~  452 (837)
T Consensus       202 TPtL~lIv~Re~eI~~F~p~~y~~i~a~~~~~~----~~~~~~~~~--~~~~-r~~-----d~---~~a~~i~~~~~~~~  266 (716)
T PRK07726        202 TPTLALIVKREKEIENFKSEPFWEVFATFNIEG----KKYEGKWEK--DNES-RLK-----DP---DMANKIAAFCQGKP  266 (716)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC----EEEEEEEEC--CCCC-CCC-----CH---HHHHHHHHHHCCCC
T ss_conf             167899999999998489964389999999789----179999952--7767-458-----99---99999999964898


Q ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHH-HCCCCCCCCHHHHHHHHHHCCEEEC
Q ss_conf             11001101112346431017899874332-1025665515789999973220221
Q gi|254780306|r  453 LIATETNASQHFTEPPPRYSESSLIKKME-EIGIGRPSTYATILETLYKRKYVIA  506 (837)
Q Consensus       453 ~~~~~~~~~~~~TkPP~rytEasLik~mE-~~GIGrPSTyA~II~~L~~R~YV~~  506 (837)
T Consensus       267 ~~V~~v~~k~k~~~PP~pf~ls~LQ~~A~~~~g~sa~~T-l~iAQ~LYE~glITY  320 (716)
T PRK07726        267 AVVKEMKTERKEFQPPLLFNLSSLQATANKAFKFSPKKT-LDITQKLYQKGIVSY  320 (716)
T ss_pred             EEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHH-HHHHHHHHHCCCEEE
T ss_conf             499999842466589998778999999998729899999-999999985696200